RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 SLC25A36Q96CQ1 311 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 HAVCR1Q96D42 359 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 MRPL53Q96EL3 112 aaKnown RBP3.28□□□□□ -1.88
VPS50-214ENST00000477935 TMEM237Q96Q45 408 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 OR7D2Q96RA2 312 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 ZNF607Q96SK3 696 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 SH3GL3Q99963 347 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 ZNF649Q9BS31 505 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 METTL8Q9H825 291 aaKnown RBP3.28□□□□□ -1.88
VPS50-214ENST00000477935 SIRT7Q9NRC8 400 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 ABCB10Q9NRK6 738 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 TMEM38BQ9NVV0 291 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 ARGLU1Q9NWB6 273 aaPredicted RBP3.28□□□□□ -1.88
VPS50-214ENST00000477935 ZNF446Q9NWS9 450 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 ONECUT1Q9UBC0 465 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 RNF14Q9UBS8 474 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 STK38LQ9Y2H1 464 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 WDR45Q9Y484 360 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 KCNE3Q9Y6H6 103 aa3.28□□□□□ -1.88
VPS50-214ENST00000477935 SEC14L6B5MCN3 397 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 M0R1W7 72 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 LGALS8O00214 317 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 SLC28A1O00337 649 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 DNALI1O14645 258 aaPredicted RBP3.27□□□□□ -1.89
VPS50-214ENST00000477935 OR4F21O95013 312 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 C2P06681 752 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 RPS17P08708 135 aaKnown RBP3.27□□□□□ -1.89
VPS50-214ENST00000477935 MMP7P09237 267 aaPredicted RBP3.27□□□□□ -1.89
VPS50-214ENST00000477935 CPA3P15088 417 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 CNTFRP26992 372 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 ACAA2P42765 397 aaKnown RBP3.27□□□□□ -1.89
VPS50-214ENST00000477935 MAGEA4P43358 317 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 BLCAPP62952 87 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 PPP1R7Q15435 360 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 CHI3L2Q15782 390 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 IMPG1Q17R60 797 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 IFI44LQ53G44 452 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 PABPC1L2AQ5JQF8 200 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 TMEM255AQ5JRV8 349 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 CARD17Q5XLA6 110 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 Q6ZR03 302 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 C16orf62Q7Z3J2 963 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 SERPINA12Q8IW75 414 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 ZNF491Q8N8L2 437 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 OR5D13Q8NGL4 314 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 ZNF420Q8TAQ5 688 aaPredicted RBP3.27□□□□□ -1.89
VPS50-214ENST00000477935 SFXN5Q8TD22 340 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 RPS4Y2Q8TD47 263 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 RORBQ92753 470 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 ITCHQ96J02 903 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 AKR1E2Q96JD6 320 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 CXorf58Q96LI9 332 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 PITX2Q99697 317 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 ST6GALNAC5Q9BVH7 336 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 DPY30Q9C005 99 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 SIAEQ9HAT2 523 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 RRAGDQ9NQL2 400 aaPredicted RBP3.27□□□□□ -1.89
VPS50-214ENST00000477935 TECRQ9NZ01 308 aaKnown RBP3.27□□□□□ -1.89
VPS50-214ENST00000477935 GLTPQ9NZD2 209 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 KAAG1Q9UBP8 84 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 ATP6V1HQ9UI12 483 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 ZNF225Q9UK10 706 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 TMCC3Q9ULS5 477 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 HSPG2P98160 4391 aa3.27□□□□□ -1.89
VPS50-214ENST00000477935 TANC2Q9HCD6 1990 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 IGLV1-36A0A0B4J1U3 117 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 A0A1W2PRD5 423 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 A0A1W2PRF3 423 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 A0A1W2PRM7 423 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 A6NDX4 124 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 H3BQF6 201 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 BCAS1O75363 584 aaPredicted RBP3.26□□□□□ -1.89
VPS50-214ENST00000477935 SEC22BO75396 215 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 MBD3O95983 291 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 FCGR3AP08637 254 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 NQO1P15559 274 aaKnown RBP3.26□□□□□ -1.89
VPS50-214ENST00000477935 NCF2P19878 526 aaPredicted RBP3.26□□□□□ -1.89
VPS50-214ENST00000477935 ANP32AP39687 249 aaKnown RBP3.26□□□□□ -1.89
VPS50-214ENST00000477935 PMELP40967 661 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 RPS5P46782 204 aaKnown RBP3.26□□□□□ -1.89
VPS50-214ENST00000477935 PKNOX1P55347 436 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 RPL23AP62750 156 aaKnown RBP3.26□□□□□ -1.89
VPS50-214ENST00000477935 NDPQ00604 133 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 BNIP2Q12982 314 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 PDIA2Q13087 525 aaKnown RBP3.26□□□□□ -1.89
VPS50-214ENST00000477935 KIAA0040Q15053 153 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 FAM201AQ5SY85 155 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 LGALS9CQ6DKI2 356 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 CMC1Q7Z7K0 106 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 ZNF429Q86V71 674 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 STHQ8IWL8 128 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 Q8N7P7 452 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 FBXO36Q8NEA4 188 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 OR8G5Q8NG78 346 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 OR4K5Q8NGD3 323 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 OR6X1Q8NH79 312 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 TMEM54Q969K7 222 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 CMBLQ96DG6 245 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 SLC41A3Q96GZ6 507 aa3.26□□□□□ -1.89
VPS50-214ENST00000477935 CCDC115Q96NT0 180 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms