RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 SSX2Q16385 188 aa12.73□□□□□ -0.37
CLDN11-204ENST00000477531 KLHL22Q53GT1 634 aa12.73□□□□□ -0.37
CLDN11-204ENST00000477531 MINOS1Q5TGZ0 78 aa12.73□□□□□ -0.37
CLDN11-204ENST00000477531 SERPINA12Q8IW75 414 aa12.73□□□□□ -0.37
CLDN11-204ENST00000477531 TPRX1Q8N7U7 411 aa12.73□□□□□ -0.37
CLDN11-204ENST00000477531 OR52N4Q8NGI2 321 aa12.73□□□□□ -0.37
CLDN11-204ENST00000477531 OR10AC1Q8NH08 325 aa12.73□□□□□ -0.37
CLDN11-204ENST00000477531 OR5AK2Q8NH90 309 aa12.73□□□□□ -0.37
CLDN11-204ENST00000477531 NDNFQ8TB73 568 aa12.73□□□□□ -0.37
CLDN11-204ENST00000477531 CPNE2Q96FN4 548 aaPredicted RBP12.73□□□□□ -0.37
CLDN11-204ENST00000477531 AMBNQ9NP70 447 aa12.73□□□□□ -0.37
CLDN11-204ENST00000477531 UBE2J1Q9Y385 318 aaPredicted RBP12.73□□□□□ -0.37
CLDN11-204ENST00000477531 MINOS1-NBL1R4GNA1 71 aa12.73□□□□□ -0.37
CLDN11-204ENST00000477531 TRGV10A0A0A0MS01 117 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 PSPNO60542 156 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 BAG2O95816 211 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 CSF1P09603 554 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 TMEM225BP0DP42 221 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 ZNF44P15621 663 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 GABRB1P18505 474 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 EFNB2P52799 333 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 P2RX3P56373 397 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 SCN1BQ07699 218 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 OR52W1Q6IF63 320 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 CRIP3Q6Q6R5 217 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 SAXO1Q8IYX7 474 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 PQLC1Q8N2U9 271 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 ZNF555Q8NEP9 628 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 OR4S1Q8NGB4 309 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 OR51A4Q8NGJ6 313 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 OR5D18Q8NGL1 313 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 FAM110DQ8TAY7 271 aaPredicted RBP12.72□□□□□ -0.37
CLDN11-204ENST00000477531 TSEN15Q8WW01 171 aaKnown RBP12.72□□□□□ -0.37
CLDN11-204ENST00000477531 SPACA5Q96QH8 159 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 CLEC7AQ9BXN2 247 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 GAL3ST2Q9H3Q3 398 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 DHDHQ9UQ10 334 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 TCF19Q9Y242 345 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 MYRFQ9Y2G1 1151 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 SIGLEC9Q9Y336 463 aa12.72□□□□□ -0.37
CLDN11-204ENST00000477531 MAGEB3O15480 346 aa12.71□□□□□ -0.37
CLDN11-204ENST00000477531 RRP9O43818 475 aaKnown RBP12.71□□□□□ -0.37
CLDN11-204ENST00000477531 KDM4BO94953 1096 aa12.71□□□□□ -0.37
CLDN11-204ENST00000477531 ALX3O95076 343 aa12.71□□□□□ -0.37
CLDN11-204ENST00000477531 OR2H2O95918 312 aa12.71□□□□□ -0.37
CLDN11-204ENST00000477531 OR3A1P47881 315 aa12.71□□□□□ -0.37
CLDN11-204ENST00000477531 SLC34A1Q06495 639 aa12.71□□□□□ -0.37
CLDN11-204ENST00000477531 TCF23Q7RTU1 214 aa12.71□□□□□ -0.37
CLDN11-204ENST00000477531 PIFOQ8TCI5 191 aa12.71□□□□□ -0.37
CLDN11-204ENST00000477531 SLC29A1Q99808 456 aa12.71□□□□□ -0.37
CLDN11-204ENST00000477531 TMEM133Q9H2Q1 129 aa12.71□□□□□ -0.37
CLDN11-204ENST00000477531 ISG20L2Q9H9L3 353 aaKnown RBP12.71□□□□□ -0.37
CLDN11-204ENST00000477531 FAM118AQ9NWS6 357 aa12.71□□□□□ -0.37
CLDN11-204ENST00000477531 ERVK13-1Q9NX77 482 aa12.71□□□□□ -0.37
CLDN11-204ENST00000477531 HILPDAQ9Y5L2 63 aa12.71□□□□□ -0.37
CLDN11-204ENST00000477531 IGHV2-26A0A0B4J1V2 119 aa12.7□□□□□ -0.38
CLDN11-204ENST00000477531 F2RL2O00254 374 aa12.7□□□□□ -0.38
CLDN11-204ENST00000477531 DEGS1O15121 323 aa12.7□□□□□ -0.38
CLDN11-204ENST00000477531 SULT1B1O43704 296 aa12.7□□□□□ -0.38
CLDN11-204ENST00000477531 PEX14O75381 377 aa12.7□□□□□ -0.38
CLDN11-204ENST00000477531 VSIG10L2P0DP72 767 aa12.7□□□□□ -0.38
CLDN11-204ENST00000477531 RAB13P51153 203 aa12.7□□□□□ -0.38
CLDN11-204ENST00000477531 ARHGDIBP52566 201 aa12.7□□□□□ -0.38
CLDN11-204ENST00000477531 IL18R1Q13478 541 aa12.7□□□□□ -0.38
CLDN11-204ENST00000477531 KISS1Q15726 138 aa12.7□□□□□ -0.38
CLDN11-204ENST00000477531 PDLIM3Q53GG5 364 aaPredicted RBP12.7□□□□□ -0.38
CLDN11-204ENST00000477531 ARSJQ5FYB0 599 aaPredicted RBP12.7□□□□□ -0.38
CLDN11-204ENST00000477531 DYNAPQ8N1N2 210 aa12.7□□□□□ -0.38
CLDN11-204ENST00000477531 KLHDC1Q8N7A1 406 aa12.7□□□□□ -0.38
CLDN11-204ENST00000477531 CHST4Q8NCG5 386 aa12.7□□□□□ -0.38
CLDN11-204ENST00000477531 OR52I1Q8NGK6 324 aa12.7□□□□□ -0.38
CLDN11-204ENST00000477531 PRSS22Q9GZN4 317 aa12.7□□□□□ -0.38
CLDN11-204ENST00000477531 MRPS18AQ9NVS2 196 aaKnown RBP12.7□□□□□ -0.38
CLDN11-204ENST00000477531 FOXJ3Q9UPW0 622 aa12.7□□□□□ -0.38
CLDN11-204ENST00000477531 VWFP04275 2813 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 IGKV1-12A0A0C4DH73 117 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 A6NDX4 124 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 CHST1O43916 411 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 ZFPL1O95159 310 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 TSPAN15O95858 294 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 IGKV1D-12P01611 117 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 RAB3AP20336 220 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 LMO1P25800 156 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 HTR1DP28221 377 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 MTNR1BP49286 362 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 DYNLT3P51808 116 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 KRBOX4Q5JUW0 171 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 LPCAT4Q643R3 524 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 RTN4RL2Q86UN3 420 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 SATL1Q86VE3 508 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 TMEM219Q86XT9 240 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 PARP16Q8N5Y8 322 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 ZNF596Q8TC21 504 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 CORO2AQ92828 525 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 STMN2Q93045 179 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 RDH12Q96NR8 316 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 GPER1Q99527 375 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 PDCD1LG2Q9BQ51 273 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 TAS2R3Q9NYW6 316 aa12.69□□□□□ -0.38
CLDN11-204ENST00000477531 DSCAML1Q8TD84 2053 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms