RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 A0A1W2PQ09 198 aa10.19□□□□□ -0.78
APTX-220ENST00000476858 GPX5O75715 221 aa10.19□□□□□ -0.78
APTX-220ENST00000476858 SC5DO75845 299 aa10.19□□□□□ -0.78
APTX-220ENST00000476858 ECDO95905 644 aaPredicted RBP10.19□□□□□ -0.78
APTX-220ENST00000476858 OR2H2O95918 312 aa10.19□□□□□ -0.78
APTX-220ENST00000476858 IFNA2P01563 188 aa10.19□□□□□ -0.78
APTX-220ENST00000476858 CD1AP06126 327 aa10.19□□□□□ -0.78
APTX-220ENST00000476858 LIPFP07098 398 aa10.19□□□□□ -0.78
APTX-220ENST00000476858 HSMCR30P0CW71 290 aa10.19□□□□□ -0.78
APTX-220ENST00000476858 BDKRB2P30411 391 aa10.19□□□□□ -0.78
APTX-220ENST00000476858 TAS2R43P59537 309 aa10.19□□□□□ -0.78
APTX-220ENST00000476858 BDH1Q02338 343 aa10.19□□□□□ -0.78
APTX-220ENST00000476858 SCN1BQ07699 218 aa10.19□□□□□ -0.78
APTX-220ENST00000476858 EDDM3AQ14507 147 aa10.19□□□□□ -0.78
APTX-220ENST00000476858 ZNF146Q15072 292 aa10.19□□□□□ -0.78
APTX-220ENST00000476858 SSX1Q16384 188 aa10.19□□□□□ -0.78
APTX-220ENST00000476858 DEFB112Q30KQ8 113 aa10.19□□□□□ -0.78
APTX-220ENST00000476858 ACSM3Q53FZ2 586 aa10.19□□□□□ -0.78
APTX-220ENST00000476858 RBM48Q5RL73 367 aaKnown RBP10.19□□□□□ -0.78
APTX-220ENST00000476858 BAIAP2L2Q6UXY1 529 aa10.19□□□□□ -0.78
APTX-220ENST00000476858 ASCL4Q6XD76 172 aa10.19□□□□□ -0.78
APTX-220ENST00000476858 LRRTM1Q86UE6 522 aa10.19□□□□□ -0.78
APTX-220ENST00000476858 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.19□□□□□ -0.78
APTX-220ENST00000476858 PNLDC1Q8NA58 520 aaKnown RBP10.19□□□□□ -0.78
APTX-220ENST00000476858 OR4D6Q8NGJ1 314 aa10.19□□□□□ -0.78
APTX-220ENST00000476858 GFI1Q99684 422 aa10.19□□□□□ -0.78
APTX-220ENST00000476858 FAM192AQ9GZU8 254 aa10.19□□□□□ -0.78
APTX-220ENST00000476858 ING3Q9NXR8 418 aa10.19□□□□□ -0.78
APTX-220ENST00000476858 COL6A5A8TX70 2615 aa10.18□□□□□ -0.78
APTX-220ENST00000476858 A0A0U1RQK1 487 aa10.18□□□□□ -0.78
APTX-220ENST00000476858 RNF212BA8MTL3 300 aa10.18□□□□□ -0.78
APTX-220ENST00000476858 HSPB6O14558 160 aa10.18□□□□□ -0.78
APTX-220ENST00000476858 TCF21O43680 179 aa10.18□□□□□ -0.78
APTX-220ENST00000476858 MMP23AO75900 390 aa10.18□□□□□ -0.78
APTX-220ENST00000476858 ALDOBP05062 364 aa10.18□□□□□ -0.78
APTX-220ENST00000476858 CD2P06729 351 aa10.18□□□□□ -0.78
APTX-220ENST00000476858 FSTP19883 344 aa10.18□□□□□ -0.78
APTX-220ENST00000476858 GABRR1P24046 479 aa10.18□□□□□ -0.78
APTX-220ENST00000476858 EEF1B2P24534 225 aaKnown RBP10.18□□□□□ -0.78
APTX-220ENST00000476858 PTGFRP43088 359 aa10.18□□□□□ -0.78
APTX-220ENST00000476858 EMX1Q04741 257 aaPredicted RBP10.18□□□□□ -0.78
APTX-220ENST00000476858 TPBGQ13641 420 aa10.18□□□□□ -0.78
APTX-220ENST00000476858 RTN4RL2Q86UN3 420 aa10.18□□□□□ -0.78
APTX-220ENST00000476858 SAXO1Q8IYX7 474 aa10.18□□□□□ -0.78
APTX-220ENST00000476858 BPIFB2Q8N4F0 458 aa10.18□□□□□ -0.78
APTX-220ENST00000476858 MUL1Q969V5 352 aa10.18□□□□□ -0.78
APTX-220ENST00000476858 COQ2Q96H96 371 aa10.18□□□□□ -0.78
APTX-220ENST00000476858 AJUBAQ96IF1 538 aa10.18□□□□□ -0.78
APTX-220ENST00000476858 GPER1Q99527 375 aa10.18□□□□□ -0.78
APTX-220ENST00000476858 PPA2Q9H2U2 334 aa10.18□□□□□ -0.78
APTX-220ENST00000476858 TMEM138Q9NPI0 162 aa10.18□□□□□ -0.78
APTX-220ENST00000476858 ACOT13Q9NPJ3 140 aa10.18□□□□□ -0.78
APTX-220ENST00000476858 ING4Q9UNL4 249 aa10.18□□□□□ -0.78
APTX-220ENST00000476858 KPTNQ9Y664 436 aa10.18□□□□□ -0.78
APTX-220ENST00000476858 TRAV24A0A0B4J272 114 aa10.17□□□□□ -0.78
APTX-220ENST00000476858 IGHV1-69DA0A0B4J2H0 117 aa10.17□□□□□ -0.78
APTX-220ENST00000476858 A0A0G2JK05 382 aa10.17□□□□□ -0.78
APTX-220ENST00000476858 SHISA3A0PJX4 238 aa10.17□□□□□ -0.78
APTX-220ENST00000476858 SLC33A1O00400 549 aaPredicted RBP10.17□□□□□ -0.78
APTX-220ENST00000476858 HTR3BO95264 441 aa10.17□□□□□ -0.78
APTX-220ENST00000476858 IGHV1-69P01742 117 aa10.17□□□□□ -0.78
APTX-220ENST00000476858 CHRM2P08172 466 aa10.17□□□□□ -0.78
APTX-220ENST00000476858 ZNF93P35789 620 aaPredicted RBP10.17□□□□□ -0.78
APTX-220ENST00000476858 GDNFP39905 211 aa10.17□□□□□ -0.78
APTX-220ENST00000476858 GLIPR1P48060 266 aa10.17□□□□□ -0.78
APTX-220ENST00000476858 EDDM3BP56851 147 aa10.17□□□□□ -0.78
APTX-220ENST00000476858 HILS1P60008 231 aa10.17□□□□□ -0.78
APTX-220ENST00000476858 RPL31P62899 125 aaKnown RBP10.17□□□□□ -0.78
APTX-220ENST00000476858 PPP3R1P63098 170 aa10.17□□□□□ -0.78
APTX-220ENST00000476858 FABP5Q01469 135 aa10.17□□□□□ -0.78
APTX-220ENST00000476858 GRK1Q15835 563 aa10.17□□□□□ -0.78
APTX-220ENST00000476858 ZNF782Q6ZMW2 699 aaPredicted RBP10.17□□□□□ -0.78
APTX-220ENST00000476858 CEACAM19Q7Z692 300 aa10.17□□□□□ -0.78
APTX-220ENST00000476858 SPARTQ8N0X7 666 aa10.17□□□□□ -0.78
APTX-220ENST00000476858 OR8H2Q8N162 312 aa10.17□□□□□ -0.78
APTX-220ENST00000476858 ZSCAN4Q8NAM6 433 aaPredicted RBP10.17□□□□□ -0.78
APTX-220ENST00000476858 PXT1Q8NFP0 134 aa10.17□□□□□ -0.78
APTX-220ENST00000476858 SNX22Q96L94 193 aa10.17□□□□□ -0.78
APTX-220ENST00000476858 MGLLQ99685 303 aa10.17□□□□□ -0.78
APTX-220ENST00000476858 C19orf24Q9BVV8 132 aa10.17□□□□□ -0.78
APTX-220ENST00000476858 MS4A7Q9GZW8 240 aaPredicted RBP10.17□□□□□ -0.78
APTX-220ENST00000476858 EXOSC4Q9NPD3 245 aaKnown RBP10.17□□□□□ -0.78
APTX-220ENST00000476858 TNFRSF19Q9NS68 423 aa10.17□□□□□ -0.78
APTX-220ENST00000476858 TRAV39A0A0B4J263 110 aa10.16□□□□□ -0.78
APTX-220ENST00000476858 DNAJC9-AS1A6NH13 148 aa10.16□□□□□ -0.78
APTX-220ENST00000476858 CYB5AP00167 134 aa10.16□□□□□ -0.78
APTX-220ENST00000476858 CPEP16870 476 aa10.16□□□□□ -0.78
APTX-220ENST00000476858 SERPINA2P20848 420 aa10.16□□□□□ -0.78
APTX-220ENST00000476858 BMXP51813 675 aa10.16□□□□□ -0.78
APTX-220ENST00000476858 AESQ08117 197 aa10.16□□□□□ -0.78
APTX-220ENST00000476858 MLLT11Q13015 90 aaPredicted RBP10.16□□□□□ -0.78
APTX-220ENST00000476858 ATXN7L3Q14CW9 347 aaPredicted RBP10.16□□□□□ -0.78
APTX-220ENST00000476858 TBCEQ15813 527 aaPredicted RBP10.16□□□□□ -0.78
APTX-220ENST00000476858 LDLRAD2Q5SZI1 272 aa10.16□□□□□ -0.78
APTX-220ENST00000476858 ELP2Q6IA86 826 aa10.16□□□□□ -0.78
APTX-220ENST00000476858 C9orf139Q6ZV77 190 aa10.16□□□□□ -0.78
APTX-220ENST00000476858 Q8IYB0 196 aa10.16□□□□□ -0.78
APTX-220ENST00000476858 JAGN1Q8N5M9 183 aa10.16□□□□□ -0.78
APTX-220ENST00000476858 KIR3DL3Q8N743 410 aa10.16□□□□□ -0.78
APTX-220ENST00000476858 TMEM104Q8NE00 496 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms