RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 APOBEC3DQ96AK3 386 aaPredicted RBP14.18□□□□□ -0.14
TMEM53-208ENST00000476724 PRRG4Q9BZD6 226 aa14.18□□□□□ -0.14
TMEM53-208ENST00000476724 PLSCR2Q9NRY7 297 aa14.18□□□□□ -0.14
TMEM53-208ENST00000476724 DCHS1Q96JQ0 3298 aa14.17□□□□□ -0.14
TMEM53-208ENST00000476724 AKAP13Q12802 2813 aa14.17□□□□□ -0.14
TMEM53-208ENST00000476724 DEDDO75618 318 aa14.17□□□□□ -0.14
TMEM53-208ENST00000476724 FCGR2CP31995 323 aa14.17□□□□□ -0.14
TMEM53-208ENST00000476724 ARR3P36575 388 aa14.17□□□□□ -0.14
TMEM53-208ENST00000476724 ARG2P78540 354 aa14.17□□□□□ -0.14
TMEM53-208ENST00000476724 PLGLB1Q02325 96 aa14.17□□□□□ -0.14
TMEM53-208ENST00000476724 ZNF273Q14593 569 aa14.17□□□□□ -0.14
TMEM53-208ENST00000476724 TMEM187Q14656 261 aa14.17□□□□□ -0.14
TMEM53-208ENST00000476724 SRSF7Q16629 238 aaKnown RBP eCLIP14.17□□□□□ -0.14
TMEM53-208ENST00000476724 CALHM1Q8IU99 346 aa14.17□□□□□ -0.14
TMEM53-208ENST00000476724 TOMM40LQ969M1 308 aa14.17□□□□□ -0.14
TMEM53-208ENST00000476724 MOB3AQ96BX8 217 aa14.17□□□□□ -0.14
TMEM53-208ENST00000476724 MICU1Q9BPX6 476 aa14.17□□□□□ -0.14
TMEM53-208ENST00000476724 MS4A7Q9GZW8 240 aaPredicted RBP14.17□□□□□ -0.14
TMEM53-208ENST00000476724 CALHM2Q9HA72 323 aa14.17□□□□□ -0.14
TMEM53-208ENST00000476724 PLEKHA2Q9HB19 425 aa14.17□□□□□ -0.14
TMEM53-208ENST00000476724 ZC4H2Q9NQZ6 224 aa14.17□□□□□ -0.14
TMEM53-208ENST00000476724 ZNF581Q9P0T4 197 aa14.17□□□□□ -0.14
TMEM53-208ENST00000476724 KLF13Q9Y2Y9 288 aaPredicted RBP14.17□□□□□ -0.14
TMEM53-208ENST00000476724 STARD10Q9Y365 291 aa14.17□□□□□ -0.14
TMEM53-208ENST00000476724 CFAP47Q6ZTR5 3102 aa14.16□□□□□ -0.14
TMEM53-208ENST00000476724 PQLC2LA1A4F0 135 aa14.16□□□□□ -0.14
TMEM53-208ENST00000476724 K7EPK0 472 aa14.16□□□□□ -0.14
TMEM53-208ENST00000476724 CST4P01036 141 aa14.16□□□□□ -0.14
TMEM53-208ENST00000476724 RPL12P30050 165 aaKnown RBP14.16□□□□□ -0.14
TMEM53-208ENST00000476724 RNPS1Q15287 305 aaKnown RBP14.16□□□□□ -0.14
TMEM53-208ENST00000476724 IL34Q6ZMJ4 242 aa14.16□□□□□ -0.14
TMEM53-208ENST00000476724 Q6ZS49 121 aa14.16□□□□□ -0.14
TMEM53-208ENST00000476724 SLC25A26Q70HW3 274 aa14.16□□□□□ -0.14
TMEM53-208ENST00000476724 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.16□□□□□ -0.14
TMEM53-208ENST00000476724 FAM71E2Q8N5Q1 922 aa14.16□□□□□ -0.14
TMEM53-208ENST00000476724 CCDC71LQ8N9Z2 235 aa14.16□□□□□ -0.14
TMEM53-208ENST00000476724 APH1AQ96BI3 265 aa14.16□□□□□ -0.14
TMEM53-208ENST00000476724 LRRC46Q96FV0 321 aa14.16□□□□□ -0.14
TMEM53-208ENST00000476724 OPA3Q9H6K4 179 aa14.16□□□□□ -0.14
TMEM53-208ENST00000476724 ZNF442Q9H7R0 627 aa14.16□□□□□ -0.14
TMEM53-208ENST00000476724 DNAJC13O75165 2243 aa14.16□□□□□ -0.14
TMEM53-208ENST00000476724 SPENQ96T58 3664 aaKnown RBP14.16□□□□□ -0.14
TMEM53-208ENST00000476724 TMEM218A2RU14 115 aa14.16□□□□□ -0.14
TMEM53-208ENST00000476724 GAPDHP04406 335 aaKnown RBP14.16□□□□□ -0.14
TMEM53-208ENST00000476724 CEACAM21Q3KPI0 293 aa14.16□□□□□ -0.14
TMEM53-208ENST00000476724 MRPL21Q7Z2W9 205 aaKnown RBP14.16□□□□□ -0.14
TMEM53-208ENST00000476724 OR56B2PQ8NGI1 322 aa14.16□□□□□ -0.14
TMEM53-208ENST00000476724 MRPL24Q96A35 216 aaKnown RBP14.16□□□□□ -0.14
TMEM53-208ENST00000476724 PAPOLGQ9BWT3 736 aaKnown RBP14.16□□□□□ -0.14
TMEM53-208ENST00000476724 MMP26Q9NRE1 261 aa14.16□□□□□ -0.14
TMEM53-208ENST00000476724 JTBO76095 146 aa14.15□□□□□ -0.14
TMEM53-208ENST00000476724 OR7C1O76099 320 aaPredicted RBP14.15□□□□□ -0.14
TMEM53-208ENST00000476724 CD46P15529 392 aa14.15□□□□□ -0.14
TMEM53-208ENST00000476724 DEFA5Q01523 94 aa14.15□□□□□ -0.14
TMEM53-208ENST00000476724 PRDX4Q13162 271 aa14.15□□□□□ -0.14
TMEM53-208ENST00000476724 ZNF766Q5HY98 468 aa14.15□□□□□ -0.14
TMEM53-208ENST00000476724 BRICD5Q6PL45 260 aa14.15□□□□□ -0.14
TMEM53-208ENST00000476724 LIAT1Q6ZQX7 453 aa14.15□□□□□ -0.14
TMEM53-208ENST00000476724 NAXEQ8NCW5 288 aa14.15□□□□□ -0.14
TMEM53-208ENST00000476724 MARS2Q96GW9 593 aaKnown RBP14.15□□□□□ -0.14
TMEM53-208ENST00000476724 NARS2Q96I59 477 aaKnown RBP14.15□□□□□ -0.14
TMEM53-208ENST00000476724 TAF9BQ9HBM6 251 aa14.15□□□□□ -0.14
TMEM53-208ENST00000476724 OR2S2Q9NQN1 319 aa14.15□□□□□ -0.14
TMEM53-208ENST00000476724 SLC2A9Q9NRM0 540 aa14.15□□□□□ -0.14
TMEM53-208ENST00000476724 LPAR3Q9UBY5 353 aa14.15□□□□□ -0.14
TMEM53-208ENST00000476724 LIPGQ9Y5X9 500 aa14.15□□□□□ -0.14
TMEM53-208ENST00000476724 C5orf49A4QMS7 147 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 KLRC4-KLRK1H3BQV0 150 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 OR5AC1P0C628 307 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 CCNOP22674 350 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 HERV-K104P61576 105 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 DEFB109BQ30KR1 87 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 DPPA2Q7Z7J5 298 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 ZDHHC23Q8IYP9 409 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 FAM185AQ8N0U4 392 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 LGI3Q8N145 548 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 DYRK2Q92630 601 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 SMIM8Q96KF7 97 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 RSRP1Q9BUV0 290 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 A0A096LPE4 126 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 A0A1W2PPZ6 126 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 ZNF705EA8MWA4 302 aaPredicted RBP14.14□□□□□ -0.15
TMEM53-208ENST00000476724 E5RGE8 158 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 H7C1Q1 480 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 SS18L1O75177 396 aaPredicted RBP14.14□□□□□ -0.15
TMEM53-208ENST00000476724 ATG12O94817 140 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 ACTL6AO96019 429 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 HLA-HP01893 362 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 SPINK2P20155 84 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 FXYD4P59646 89 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 FGF12P61328 243 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 NHLH1Q02575 133 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 PLP2Q04941 152 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 RNFT1Q5M7Z0 435 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 FOXRED2Q8IWF2 684 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 MKXQ8IYA7 352 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 ZFP62Q8NB50 900 aaPredicted RBP14.14□□□□□ -0.15
TMEM53-208ENST00000476724 C18orf12Q96KH6 178 aa14.14□□□□□ -0.15
TMEM53-208ENST00000476724 FBXO9Q9UK97 447 aaPredicted RBP14.14□□□□□ -0.15
TMEM53-208ENST00000476724 NSG2Q9Y328 171 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms