RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 ELMOD2Q8IZ81 293 aa12.91□□□□□ -0.34
APOBEC3F-203ENST00000476513 OR2T29Q8NH02 315 aa12.91□□□□□ -0.34
APOBEC3F-203ENST00000476513 OR56B4Q8NH76 319 aa12.91□□□□□ -0.34
APOBEC3F-203ENST00000476513 ASB17Q8WXJ9 295 aa12.91□□□□□ -0.34
APOBEC3F-203ENST00000476513 CORO2AQ92828 525 aa12.91□□□□□ -0.34
APOBEC3F-203ENST00000476513 FEVQ99581 238 aa12.91□□□□□ -0.34
APOBEC3F-203ENST00000476513 TAS2R3Q9NYW6 316 aa12.91□□□□□ -0.34
APOBEC3F-203ENST00000476513 IKZF2Q9UKS7 526 aa12.91□□□□□ -0.34
APOBEC3F-203ENST00000476513 SLC7A11Q9UPY5 501 aa12.91□□□□□ -0.34
APOBEC3F-203ENST00000476513 LINC01548A6NM66 108 aa12.9□□□□□ -0.34
APOBEC3F-203ENST00000476513 FGF16O43320 207 aa12.9□□□□□ -0.34
APOBEC3F-203ENST00000476513 E2F6O75461 281 aa12.9□□□□□ -0.34
APOBEC3F-203ENST00000476513 LY86O95711 162 aa12.9□□□□□ -0.34
APOBEC3F-203ENST00000476513 ATP6V1B2P21281 511 aa12.9□□□□□ -0.34
APOBEC3F-203ENST00000476513 UBE2V2Q15819 145 aa12.9□□□□□ -0.34
APOBEC3F-203ENST00000476513 ZNF260Q3ZCT1 412 aa12.9□□□□□ -0.34
APOBEC3F-203ENST00000476513 BCL2L15Q5TBC7 163 aa12.9□□□□□ -0.34
APOBEC3F-203ENST00000476513 TEX38Q6PEX7 206 aa12.9□□□□□ -0.34
APOBEC3F-203ENST00000476513 MEPCEQ7L2J0 689 aaKnown RBP12.9□□□□□ -0.34
APOBEC3F-203ENST00000476513 FOXRED2Q8IWF2 684 aa12.9□□□□□ -0.34
APOBEC3F-203ENST00000476513 RPEQ96AT9 228 aa12.9□□□□□ -0.34
APOBEC3F-203ENST00000476513 CCDC134Q9H6E4 229 aa12.9□□□□□ -0.34
APOBEC3F-203ENST00000476513 MOB1AQ9H8S9 216 aa12.9□□□□□ -0.34
APOBEC3F-203ENST00000476513 RBFOX1Q9NWB1 397 aaKnown RBP12.9□□□□□ -0.34
APOBEC3F-203ENST00000476513 GLS2Q9UI32 602 aa12.9□□□□□ -0.34
APOBEC3F-203ENST00000476513 OR52A1Q9UKL2 312 aa12.9□□□□□ -0.34
APOBEC3F-203ENST00000476513 A0A087X0M5 115 aa12.89□□□□□ -0.35
APOBEC3F-203ENST00000476513 A0A1B0GX30 115 aa12.89□□□□□ -0.35
APOBEC3F-203ENST00000476513 MAGEB4O15481 346 aaPredicted RBP12.89□□□□□ -0.35
APOBEC3F-203ENST00000476513 HMGN1P05114 100 aa12.89□□□□□ -0.35
APOBEC3F-203ENST00000476513 CALCBP10092 127 aa12.89□□□□□ -0.35
APOBEC3F-203ENST00000476513 TMEM11P17152 192 aa12.89□□□□□ -0.35
APOBEC3F-203ENST00000476513 GLIPR1P48060 266 aa12.89□□□□□ -0.35
APOBEC3F-203ENST00000476513 NPBWR2P48146 333 aa12.89□□□□□ -0.35
APOBEC3F-203ENST00000476513 HES1Q14469 280 aa12.89□□□□□ -0.35
APOBEC3F-203ENST00000476513 HNF4GQ14541 408 aa12.89□□□□□ -0.35
APOBEC3F-203ENST00000476513 KPNB1Q14974 876 aaKnown RBP12.89□□□□□ -0.35
APOBEC3F-203ENST00000476513 ZNF146Q15072 292 aa12.89□□□□□ -0.35
APOBEC3F-203ENST00000476513 PNLIPRP3Q17RR3 467 aa12.89□□□□□ -0.35
APOBEC3F-203ENST00000476513 OVCH2Q7RTZ1 564 aa12.89□□□□□ -0.35
APOBEC3F-203ENST00000476513 Q8IYB0 196 aa12.89□□□□□ -0.35
APOBEC3F-203ENST00000476513 PGAM4Q8N0Y7 254 aa12.89□□□□□ -0.35
APOBEC3F-203ENST00000476513 DRAM1Q8N682 238 aa12.89□□□□□ -0.35
APOBEC3F-203ENST00000476513 TOMM40LQ969M1 308 aa12.89□□□□□ -0.35
APOBEC3F-203ENST00000476513 CITED4Q96RK1 184 aa12.89□□□□□ -0.35
APOBEC3F-203ENST00000476513 APOL4Q9BPW4 351 aa12.89□□□□□ -0.35
APOBEC3F-203ENST00000476513 PCDHB16Q9NRJ7 776 aa12.89□□□□□ -0.35
APOBEC3F-203ENST00000476513 TMEM14AQ9Y6G1 99 aa12.89□□□□□ -0.35
APOBEC3F-203ENST00000476513 R4GMQ9 66 aa12.89□□□□□ -0.35
APOBEC3F-203ENST00000476513 TCRBV5S2A0A599 114 aa12.88□□□□□ -0.35
APOBEC3F-203ENST00000476513 CCDC182A6NF36 153 aa12.88□□□□□ -0.35
APOBEC3F-203ENST00000476513 SIRPB1O00241 398 aa12.88□□□□□ -0.35
APOBEC3F-203ENST00000476513 ENTPD6O75354 484 aa12.88□□□□□ -0.35
APOBEC3F-203ENST00000476513 BCL3P20749 454 aa12.88□□□□□ -0.35
APOBEC3F-203ENST00000476513 CCL1P22362 96 aa12.88□□□□□ -0.35
APOBEC3F-203ENST00000476513 CDX1P47902 265 aaPredicted RBP12.88□□□□□ -0.35
APOBEC3F-203ENST00000476513 FUT6P51993 359 aa12.88□□□□□ -0.35
APOBEC3F-203ENST00000476513 SNU13P55769 128 aaKnown RBP12.88□□□□□ -0.35
APOBEC3F-203ENST00000476513 CDK5Q00535 292 aa12.88□□□□□ -0.35
APOBEC3F-203ENST00000476513 AESQ08117 197 aa12.88□□□□□ -0.35
APOBEC3F-203ENST00000476513 CXorf66Q5JRM2 361 aaPredicted RBP12.88□□□□□ -0.35
APOBEC3F-203ENST00000476513 PLEKHG7Q6ZR37 379 aa12.88□□□□□ -0.35
APOBEC3F-203ENST00000476513 FAM58AQ8N1B3 248 aa12.88□□□□□ -0.35
APOBEC3F-203ENST00000476513 OR4D6Q8NGJ1 314 aa12.88□□□□□ -0.35
APOBEC3F-203ENST00000476513 GIPC3Q8TF64 312 aa12.88□□□□□ -0.35
APOBEC3F-203ENST00000476513 MAGIXQ9H6Y5 334 aa12.88□□□□□ -0.35
APOBEC3F-203ENST00000476513 LYSTQ99698 3801 aa12.87□□□□□ -0.35
APOBEC3F-203ENST00000476513 TRBV2A0A0J9YWF9 115 aa12.87□□□□□ -0.35
APOBEC3F-203ENST00000476513 A0A1W2PPI3 338 aa12.87□□□□□ -0.35
APOBEC3F-203ENST00000476513 SASH3O75995 380 aa12.87□□□□□ -0.35
APOBEC3F-203ENST00000476513 PRKACAP17612 351 aa12.87□□□□□ -0.35
APOBEC3F-203ENST00000476513 PTGFRP43088 359 aa12.87□□□□□ -0.35
APOBEC3F-203ENST00000476513 CDC42P60953 191 aa12.87□□□□□ -0.35
APOBEC3F-203ENST00000476513 FHL3Q13643 280 aa12.87□□□□□ -0.35
APOBEC3F-203ENST00000476513 KIAA2026Q5HYC2 2103 aa12.87□□□□□ -0.35
APOBEC3F-203ENST00000476513 ZNF322Q6U7Q0 402 aaPredicted RBP12.87□□□□□ -0.35
APOBEC3F-203ENST00000476513 ADAMTSL5Q6ZMM2 481 aa12.87□□□□□ -0.35
APOBEC3F-203ENST00000476513 OR9G1Q8NH87 305 aa12.87□□□□□ -0.35
APOBEC3F-203ENST00000476513 BORCS8Q96FH0 119 aa12.87□□□□□ -0.35
APOBEC3F-203ENST00000476513 PLEKHA1Q9HB21 404 aa12.87□□□□□ -0.35
APOBEC3F-203ENST00000476513 ACTR3BQ9P1U1 418 aa12.87□□□□□ -0.35
APOBEC3F-203ENST00000476513 ODAMA1E959 279 aa12.86□□□□□ -0.35
APOBEC3F-203ENST00000476513 FUOMA2VDF0 154 aa12.86□□□□□ -0.35
APOBEC3F-203ENST00000476513 H3BSH0 61 aa12.86□□□□□ -0.35
APOBEC3F-203ENST00000476513 AP4M1O00189 453 aa12.86□□□□□ -0.35
APOBEC3F-203ENST00000476513 CCRL2O00421 344 aa12.86□□□□□ -0.35
APOBEC3F-203ENST00000476513 OR2H2O95918 312 aa12.86□□□□□ -0.35
APOBEC3F-203ENST00000476513 NFYBP25208 207 aa12.86□□□□□ -0.35
APOBEC3F-203ENST00000476513 FOXE3Q13461 319 aa12.86□□□□□ -0.35
APOBEC3F-203ENST00000476513 GPR50Q13585 617 aa12.86□□□□□ -0.35
APOBEC3F-203ENST00000476513 DIAPH2-AS1Q14236 149 aa12.86□□□□□ -0.35
APOBEC3F-203ENST00000476513 C17orf58Q2M2W7 97 aa12.86□□□□□ -0.35
APOBEC3F-203ENST00000476513 SPIN3Q5JUX0 258 aa12.86□□□□□ -0.35
APOBEC3F-203ENST00000476513 RNF152Q8N8N0 203 aa12.86□□□□□ -0.35
APOBEC3F-203ENST00000476513 HRASLS5Q96KN8 279 aa12.86□□□□□ -0.35
APOBEC3F-203ENST00000476513 ZMAT4Q9H898 229 aa12.86□□□□□ -0.35
APOBEC3F-203ENST00000476513 SNX5Q9Y5X3 404 aa12.86□□□□□ -0.35
APOBEC3F-203ENST00000476513 SIRT4Q9Y6E7 314 aaPredicted RBP12.86□□□□□ -0.35
APOBEC3F-203ENST00000476513 SH2D1BO14796 132 aa12.85□□□□□ -0.35
APOBEC3F-203ENST00000476513 GATBO75879 557 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms