RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 ACBD6Q9BR61 282 aa3.07□□□□□ -1.92
VPS50-212ENST00000476413 ANGPTL4Q9BY76 406 aa3.07□□□□□ -1.92
VPS50-212ENST00000476413 TSGA10Q9BZW7 698 aa3.07□□□□□ -1.92
VPS50-212ENST00000476413 MFSD1Q9H3U5 465 aa3.07□□□□□ -1.92
VPS50-212ENST00000476413 VSIRQ9H7M9 311 aa3.07□□□□□ -1.92
VPS50-212ENST00000476413 SNX24Q9Y343 169 aa3.07□□□□□ -1.92
VPS50-212ENST00000476413 USH1CQ9Y6N9 552 aa3.07□□□□□ -1.92
VPS50-212ENST00000476413 NRCAMQ92823 1304 aa3.07□□□□□ -1.92
VPS50-212ENST00000476413 IGKV1D-17A0A075B6S4 117 aa3.06□□□□□ -1.92
VPS50-212ENST00000476413 ISLRO14498 428 aa3.06□□□□□ -1.92
VPS50-212ENST00000476413 SGCEO43556 437 aa3.06□□□□□ -1.92
VPS50-212ENST00000476413 COX7A2P2O60397 106 aa3.06□□□□□ -1.92
VPS50-212ENST00000476413 NPPAP01160 153 aa3.06□□□□□ -1.92
VPS50-212ENST00000476413 PFN1P07737 140 aaKnown RBP3.06□□□□□ -1.92
VPS50-212ENST00000476413 NOS1P29475 1434 aa3.06□□□□□ -1.92
VPS50-212ENST00000476413 OR10A3P58181 314 aa3.06□□□□□ -1.92
VPS50-212ENST00000476413 BSXQ3C1V8 233 aa3.06□□□□□ -1.92
VPS50-212ENST00000476413 ZNF773Q6PK81 442 aa3.06□□□□□ -1.92
VPS50-212ENST00000476413 C1orf64Q8NEQ6 169 aa3.06□□□□□ -1.92
VPS50-212ENST00000476413 NELFBQ8WX92 580 aa3.06□□□□□ -1.92
VPS50-212ENST00000476413 SERPINB11Q96P15 392 aa3.06□□□□□ -1.92
VPS50-212ENST00000476413 CATSPER2Q96P56 530 aa3.06□□□□□ -1.92
VPS50-212ENST00000476413 ZNF436Q9C0F3 470 aaPredicted RBP3.06□□□□□ -1.92
VPS50-212ENST00000476413 SLC22A14Q9Y267 594 aa3.06□□□□□ -1.92
VPS50-212ENST00000476413 TMEM94Q12767 1356 aa3.05□□□□□ -1.92
VPS50-212ENST00000476413 GOLGA6L4A6NEF3 574 aa3.05□□□□□ -1.92
VPS50-212ENST00000476413 IGLL5B9A064 214 aa3.05□□□□□ -1.92
VPS50-212ENST00000476413 HSBP1L1C9JCN9 74 aa3.05□□□□□ -1.92
VPS50-212ENST00000476413 GP1BAP07359 652 aa3.05□□□□□ -1.92
VPS50-212ENST00000476413 SLC35E2BP0CK96 405 aa3.05□□□□□ -1.92
VPS50-212ENST00000476413 INAFM2P0DMQ5 153 aa3.05□□□□□ -1.92
VPS50-212ENST00000476413 NQO2P16083 231 aa3.05□□□□□ -1.92
VPS50-212ENST00000476413 MAGEA6P43360 314 aa3.05□□□□□ -1.92
VPS50-212ENST00000476413 CCL23P55773 120 aa3.05□□□□□ -1.92
VPS50-212ENST00000476413 BNIP2Q12982 314 aa3.05□□□□□ -1.92
VPS50-212ENST00000476413 TRIP13Q15645 432 aaPredicted RBP3.05□□□□□ -1.92
VPS50-212ENST00000476413 UBE2NLQ5JXB2 153 aa3.05□□□□□ -1.92
VPS50-212ENST00000476413 ERICH5Q6P6B1 374 aa3.05□□□□□ -1.92
VPS50-212ENST00000476413 TMEM144Q7Z5S9 345 aa3.05□□□□□ -1.92
VPS50-212ENST00000476413 OR2M3Q8NG83 312 aa3.05□□□□□ -1.92
VPS50-212ENST00000476413 OR4C13Q8NGP0 309 aa3.05□□□□□ -1.92
VPS50-212ENST00000476413 OR8S1Q8NH09 359 aa3.05□□□□□ -1.92
VPS50-212ENST00000476413 YPEL4Q96NS1 127 aa3.05□□□□□ -1.92
VPS50-212ENST00000476413 OR52A5Q9H2C5 316 aa3.05□□□□□ -1.92
VPS50-212ENST00000476413 DIABLOQ9NR28 239 aa3.05□□□□□ -1.92
VPS50-212ENST00000476413 SHANK1Q9Y566 2161 aa3.05□□□□□ -1.92
VPS50-212ENST00000476413 BAZ1BQ9UIG0 1483 aaKnown RBP3.04□□□□□ -1.92
VPS50-212ENST00000476413 SEC16AO15027 2179 aa3.04□□□□□ -1.92
VPS50-212ENST00000476413 NUP205Q92621 2012 aa3.04□□□□□ -1.92
VPS50-212ENST00000476413 IGKV1OR2-108A0A075B7D4 117 aa3.04□□□□□ -1.92
VPS50-212ENST00000476413 LINC00854A0A1B0GVQ3 168 aa3.04□□□□□ -1.92
VPS50-212ENST00000476413 A0A1B0GX12 115 aa3.04□□□□□ -1.92
VPS50-212ENST00000476413 GMNCA6NCL1 334 aa3.04□□□□□ -1.92
VPS50-212ENST00000476413 IGHG2P01859 326 aa3.04□□□□□ -1.92
VPS50-212ENST00000476413 HLA-DMAP28067 261 aa3.04□□□□□ -1.92
VPS50-212ENST00000476413 SPAM1P38567 509 aa3.04□□□□□ -1.92
VPS50-212ENST00000476413 RPS11P62280 158 aaKnown RBP eCLIP3.04□□□□□ -1.92
VPS50-212ENST00000476413 TMEM215Q68D42 235 aa3.04□□□□□ -1.92
VPS50-212ENST00000476413 MARCH3Q86UD3 253 aa3.04□□□□□ -1.92
VPS50-212ENST00000476413 OR8A1Q8NGG7 326 aa3.04□□□□□ -1.92
VPS50-212ENST00000476413 OR6K3Q8NGY3 331 aa3.04□□□□□ -1.92
VPS50-212ENST00000476413 ZNF721Q8TF20 911 aa3.04□□□□□ -1.92
VPS50-212ENST00000476413 RBPMSQ93062 196 aaKnown RBP3.04□□□□□ -1.92
VPS50-212ENST00000476413 SUCNR1Q9BXA5 334 aa3.04□□□□□ -1.92
VPS50-212ENST00000476413 INIPQ9NRY2 104 aa3.04□□□□□ -1.92
VPS50-212ENST00000476413 NRBP2Q9NSY0 501 aa3.04□□□□□ -1.92
VPS50-212ENST00000476413 ZNF492Q9P255 531 aa3.04□□□□□ -1.92
VPS50-212ENST00000476413 ZNF780BQ9Y6R6 833 aa3.04□□□□□ -1.92
VPS50-212ENST00000476413 PGPA6NDG6 321 aa3.03□□□□□ -1.92
VPS50-212ENST00000476413 CD300LBA8K4G0 201 aa3.03□□□□□ -1.92
VPS50-212ENST00000476413 IQCF5A8MTL0 148 aa3.03□□□□□ -1.92
VPS50-212ENST00000476413 H3BP45 60 aa3.03□□□□□ -1.92
VPS50-212ENST00000476413 CA2P00918 260 aa3.03□□□□□ -1.92
VPS50-212ENST00000476413 RPA3P35244 121 aaPredicted RBP3.03□□□□□ -1.92
VPS50-212ENST00000476413 PLTPP55058 493 aa3.03□□□□□ -1.92
VPS50-212ENST00000476413 USF2Q15853 346 aaPredicted RBP3.03□□□□□ -1.92
VPS50-212ENST00000476413 SELENOHQ8IZQ5 122 aaKnown RBP3.03□□□□□ -1.92
VPS50-212ENST00000476413 ZNF680Q8NEM1 530 aa3.03□□□□□ -1.92
VPS50-212ENST00000476413 RORBQ92753 470 aa3.03□□□□□ -1.92
VPS50-212ENST00000476413 YIPF5Q969M3 257 aa3.03□□□□□ -1.92
VPS50-212ENST00000476413 LINC01587Q99440 93 aa3.03□□□□□ -1.92
VPS50-212ENST00000476413 SLC25A31Q9H0C2 315 aa3.03□□□□□ -1.92
VPS50-212ENST00000476413 METTL8Q9H825 291 aaKnown RBP3.03□□□□□ -1.92
VPS50-212ENST00000476413 TRIM45Q9H8W5 580 aaPredicted RBP3.03□□□□□ -1.92
VPS50-212ENST00000476413 CHMP5Q9NZZ3 219 aa3.03□□□□□ -1.92
VPS50-212ENST00000476413 ADGRL1O94910 1474 aa3.03□□□□□ -1.93
VPS50-212ENST00000476413 TRAV8-3A0A0A6YYJ7 113 aa3.02□□□□□ -1.93
VPS50-212ENST00000476413 IGHV3-43A0A0B4J1X8 118 aa3.02□□□□□ -1.93
VPS50-212ENST00000476413 OR6C70A6NIJ9 312 aa3.02□□□□□ -1.93
VPS50-212ENST00000476413 PDCD6O75340 191 aa3.02□□□□□ -1.93
VPS50-212ENST00000476413 SOD3P08294 240 aa3.02□□□□□ -1.93
VPS50-212ENST00000476413 PRTN3P24158 256 aa3.02□□□□□ -1.93
VPS50-212ENST00000476413 CASQ1P31415 396 aa3.02□□□□□ -1.93
VPS50-212ENST00000476413 PRKCDQ05655 676 aa3.02□□□□□ -1.93
VPS50-212ENST00000476413 OR10J3Q5JRS4 329 aa3.02□□□□□ -1.93
VPS50-212ENST00000476413 ZNF470Q6ECI4 717 aa3.02□□□□□ -1.93
VPS50-212ENST00000476413 KRTAP5-5Q701N2 237 aaPredicted RBP3.02□□□□□ -1.93
VPS50-212ENST00000476413 MRPL52Q86TS9 123 aaKnown RBP3.02□□□□□ -1.93
VPS50-212ENST00000476413 SYCE1Q8N0S2 351 aa3.02□□□□□ -1.93
VPS50-212ENST00000476413 ZFP82Q8N141 532 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms