RNA–Protein interactions for RNA: ENST00000476231.1

SYF2-204, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 1 (best)

Gene SYF2, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-204ENST00000476231 CCDC120Q96HB5 630 aa16.37■□□□□ 0.21
SYF2-204ENST00000476231 BARX1Q9HBU1 254 aaPredicted RBP16.37■□□□□ 0.21
SYF2-204ENST00000476231 ANXA10Q9UJ72 324 aa16.37■□□□□ 0.21
SYF2-204ENST00000476231 TMA7Q9Y2S6 64 aaKnown RBP16.37■□□□□ 0.21
SYF2-204ENST00000476231 CACNA1GO43497 2377 aa16.36■□□□□ 0.21
SYF2-204ENST00000476231 ZNF850A8MQ14 1090 aa16.36■□□□□ 0.21
SYF2-204ENST00000476231 SDCBPO00560 298 aaPredicted RBP16.36■□□□□ 0.21
SYF2-204ENST00000476231 CBR1P16152 277 aa16.36■□□□□ 0.21
SYF2-204ENST00000476231 GLRA1P23415 457 aa16.36■□□□□ 0.21
SYF2-204ENST00000476231 SLC9A3R2Q15599 337 aa16.36■□□□□ 0.21
SYF2-204ENST00000476231 DHRS11Q6UWP2 260 aa16.36■□□□□ 0.21
SYF2-204ENST00000476231 BEND4Q6ZU67 534 aa16.36■□□□□ 0.21
SYF2-204ENST00000476231 PIK3IP1Q96FE7 263 aa16.36■□□□□ 0.21
SYF2-204ENST00000476231 LINC00052Q96N35 136 aa16.36■□□□□ 0.21
SYF2-204ENST00000476231 PAPOLGQ9BWT3 736 aaKnown RBP16.36■□□□□ 0.21
SYF2-204ENST00000476231 SHARPINQ9H0F6 387 aa16.36■□□□□ 0.21
SYF2-204ENST00000476231 ZNF701Q9NV72 531 aaPredicted RBP16.36■□□□□ 0.21
SYF2-204ENST00000476231 MEMO1Q9Y316 297 aa16.36■□□□□ 0.21
SYF2-204ENST00000476231 URB1O60287 2271 aaKnown RBP16.36■□□□□ 0.21
SYF2-204ENST00000476231 F5H0A9 414 aaPredicted RBP16.35■□□□□ 0.21
SYF2-204ENST00000476231 Q8NA96 180 aa16.35■□□□□ 0.21
SYF2-204ENST00000476231 DCUN1D4Q92564 292 aa16.35■□□□□ 0.21
SYF2-204ENST00000476231 OPN3Q9H1Y3 402 aaPredicted RBP16.35■□□□□ 0.21
SYF2-204ENST00000476231 CDH20Q9HBT6 801 aa16.35■□□□□ 0.21
SYF2-204ENST00000476231 ZNF71Q9NQZ8 489 aaPredicted RBP16.35■□□□□ 0.21
SYF2-204ENST00000476231 C1orf123Q9NWV4 160 aa16.35■□□□□ 0.21
SYF2-204ENST00000476231 A0A1W2PR80 420 aa16.35■□□□□ 0.21
SYF2-204ENST00000476231 IFNA2P01563 188 aa16.35■□□□□ 0.21
SYF2-204ENST00000476231 IDH3GP51553 393 aaPredicted RBP16.35■□□□□ 0.21
SYF2-204ENST00000476231 PDZK1IP1Q13113 114 aa16.35■□□□□ 0.21
SYF2-204ENST00000476231 PRDX4Q13162 271 aa16.35■□□□□ 0.21
SYF2-204ENST00000476231 ATXN7L3Q14CW9 347 aaPredicted RBP16.35■□□□□ 0.21
SYF2-204ENST00000476231 TSC22D1Q15714 1073 aa16.35■□□□□ 0.21
SYF2-204ENST00000476231 TUSC1Q2TAM9 212 aa16.35■□□□□ 0.21
SYF2-204ENST00000476231 CXorf67Q86X51 503 aaPredicted RBP16.35■□□□□ 0.21
SYF2-204ENST00000476231 OSR2Q8N2R0 312 aa16.35■□□□□ 0.21
SYF2-204ENST00000476231 STPG2Q8N412 459 aa16.35■□□□□ 0.21
SYF2-204ENST00000476231 WDR31Q8NA23 367 aa16.35■□□□□ 0.21
SYF2-204ENST00000476231 POC1AQ8NBT0 407 aa16.35■□□□□ 0.21
SYF2-204ENST00000476231 GALNT11Q8NCW6 608 aa16.35■□□□□ 0.21
SYF2-204ENST00000476231 Q8NFD4 153 aa16.35■□□□□ 0.21
SYF2-204ENST00000476231 AQP10Q96PS8 301 aa16.35■□□□□ 0.21
SYF2-204ENST00000476231 OBP2BQ9NPH6 170 aa16.35■□□□□ 0.21
SYF2-204ENST00000476231 NECAP2Q9NVZ3 263 aa16.35■□□□□ 0.21
SYF2-204ENST00000476231 GPR160Q9UJ42 338 aa16.35■□□□□ 0.21
SYF2-204ENST00000476231 CD300LBA8K4G0 201 aa16.34■□□□□ 0.21
SYF2-204ENST00000476231 PRSS44E7EML9 344 aa16.34■□□□□ 0.21
SYF2-204ENST00000476231 BET1O15155 118 aa16.34■□□□□ 0.21
SYF2-204ENST00000476231 SPRY1O43609 319 aaPredicted RBP16.34■□□□□ 0.21
SYF2-204ENST00000476231 CELA3BP08861 270 aa16.34■□□□□ 0.21
SYF2-204ENST00000476231 PGAM2P15259 253 aa16.34■□□□□ 0.21
SYF2-204ENST00000476231 TDGF1P3P51864 188 aa16.34■□□□□ 0.21
SYF2-204ENST00000476231 NKAPLQ5M9Q1 402 aa16.34■□□□□ 0.21
SYF2-204ENST00000476231 ZDHHC23Q8IYP9 409 aa16.34■□□□□ 0.21
SYF2-204ENST00000476231 RELL2Q8NC24 303 aaPredicted RBP16.34■□□□□ 0.21
SYF2-204ENST00000476231 CMSS1Q9BQ75 279 aaKnown RBP16.34■□□□□ 0.21
SYF2-204ENST00000476231 GTF3C1Q12789 2109 aa16.34■□□□□ 0.21
SYF2-204ENST00000476231 APC2O95996 2303 aa16.33■□□□□ 0.21
SYF2-204ENST00000476231 IGKV1D-8A0A087WSZ0 117 aa16.33■□□□□ 0.21
SYF2-204ENST00000476231 H0YIZ8 118 aa16.33■□□□□ 0.21
SYF2-204ENST00000476231 TPD52L2O43399 206 aaKnown RBP16.33■□□□□ 0.21
SYF2-204ENST00000476231 ANGPTL7O43827 346 aa16.33■□□□□ 0.21
SYF2-204ENST00000476231 IGKV3-15P01624 115 aa16.33■□□□□ 0.21
SYF2-204ENST00000476231 TPT1P13693 172 aaKnown RBP16.33■□□□□ 0.21
SYF2-204ENST00000476231 TAF9Q16594 264 aa16.33■□□□□ 0.21
SYF2-204ENST00000476231 CEACAM21Q3KPI0 293 aa16.33■□□□□ 0.21
SYF2-204ENST00000476231 MYPOPQ86VE0 399 aaPredicted RBP16.33■□□□□ 0.21
SYF2-204ENST00000476231 SGPP2Q8IWX5 399 aa16.33■□□□□ 0.21
SYF2-204ENST00000476231 CYYR1Q96J86 154 aa16.33■□□□□ 0.21
SYF2-204ENST00000476231 ZNF2Q9BSG1 426 aaPredicted RBP16.33■□□□□ 0.21
SYF2-204ENST00000476231 METTL8Q9H825 291 aaKnown RBP16.33■□□□□ 0.21
SYF2-204ENST00000476231 AK3Q9UIJ7 227 aa16.33■□□□□ 0.21
SYF2-204ENST00000476231 PQLC2LA1A4F0 135 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 FAM90A10PA6NDY2 464 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 FAM90A18PA6NE21 464 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 FAM90A16PA6NEW6 464 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 FAM90A20PA6NIJ5 464 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 FAM90A8PA6NJQ4 464 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 FAM90A7PA6NKC0 464 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 FAM90A22PA8MWA6 464 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 FAM90A12PA8MX19 464 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 FAM90A5PA8MXJ8 464 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 FAM90A23PA8MXZ1 464 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 FGF16O43320 207 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 ADAP1O75689 374 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 FAM90A15PP0C7V4 464 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 FAM90A13PP0C7W8 464 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 FAM90A14PP0C7W9 464 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 FAM90A24PP0C7X0 464 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 OR5H8P0DN80 308 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 PI3P19957 117 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 RBMXP38159 391 aaKnown RBP16.33■□□□□ 0.2
SYF2-204ENST00000476231 BEX5Q5H9J7 111 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 UQCC3Q6UW78 93 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 CISD2Q8N5K1 135 aaKnown RBP16.33■□□□□ 0.2
SYF2-204ENST00000476231 NAXEQ8NCW5 288 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 MAFIPQ8WZ33 124 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 FAAP24Q9BTP7 215 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 RAXQ9Y2V3 346 aa16.33■□□□□ 0.2
SYF2-204ENST00000476231 SPEF1Q9Y4P9 236 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms