RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 MYH11P35749 1972 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 SMG1Q96Q15 3661 aaKnown RBP2.54□□□□□ -2
PTCD3-211ENST00000476215 USP24Q9UPU5 2620 aa2.54□□□□□ -2
PTCD3-211ENST00000476215 ZFYVE26Q68DK2 2539 aa2.53□□□□□ -2
PTCD3-211ENST00000476215 KNL1Q8NG31 2342 aa2.53□□□□□ -2
PTCD3-211ENST00000476215 ATG2BQ96BY7 2078 aa2.53□□□□□ -2
PTCD3-211ENST00000476215 FANCMQ8IYD8 2048 aa2.53□□□□□ -2
PTCD3-211ENST00000476215 FAM92AA1XBS5 289 aa2.53□□□□□ -2
PTCD3-211ENST00000476215 ZNF98A6NK75 572 aa2.53□□□□□ -2
PTCD3-211ENST00000476215 F8VP50 259 aa2.53□□□□□ -2
PTCD3-211ENST00000476215 ERI3O43414 337 aaKnown RBP2.53□□□□□ -2
PTCD3-211ENST00000476215 GATBO75879 557 aaKnown RBP2.53□□□□□ -2
PTCD3-211ENST00000476215 OXTP01178 125 aa2.53□□□□□ -2
PTCD3-211ENST00000476215 FGF4P08620 206 aa2.53□□□□□ -2
PTCD3-211ENST00000476215 TNNC1P63316 161 aa2.53□□□□□ -2
PTCD3-211ENST00000476215 IRF8Q02556 426 aa2.53□□□□□ -2
PTCD3-211ENST00000476215 TFDP2Q14188 446 aa2.53□□□□□ -2
PTCD3-211ENST00000476215 RWDD4Q6NW29 188 aaKnown RBP2.53□□□□□ -2
PTCD3-211ENST00000476215 TMPRSS11AQ6ZMR5 421 aa2.53□□□□□ -2
PTCD3-211ENST00000476215 UNC93AQ86WB7 457 aa2.53□□□□□ -2
PTCD3-211ENST00000476215 TMEM25Q86YD3 366 aa2.53□□□□□ -2
PTCD3-211ENST00000476215 KATNAL2Q8IYT4 538 aa2.53□□□□□ -2
PTCD3-211ENST00000476215 COMMD1Q8N668 190 aa2.53□□□□□ -2
PTCD3-211ENST00000476215 C12orf29Q8N999 325 aa2.53□□□□□ -2
PTCD3-211ENST00000476215 CA5BP1Q8WTZ4 195 aa2.53□□□□□ -2
PTCD3-211ENST00000476215 CDS1Q92903 461 aa2.53□□□□□ -2
PTCD3-211ENST00000476215 CPNE4Q96A23 557 aaPredicted RBP2.53□□□□□ -2
PTCD3-211ENST00000476215 WDR34Q96EX3 536 aa2.53□□□□□ -2
PTCD3-211ENST00000476215 IP6K3Q96PC2 410 aa2.53□□□□□ -2
PTCD3-211ENST00000476215 MED10Q9BTT4 135 aa2.53□□□□□ -2
PTCD3-211ENST00000476215 FRMD8P1Q9BZ68 369 aaPredicted RBP2.53□□□□□ -2
PTCD3-211ENST00000476215 MAP1BP46821 2468 aaKnown RBP2.53□□□□□ -2
PTCD3-211ENST00000476215 IGHV3OR16-8A0A075B7F1 116 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 TRAV25A0A0B4J276 109 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 A0A1W2PRD5 423 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 PCNX2A6NKB5 2137 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 GOLGA8TH3BQL2 631 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 COCHO43405 550 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 XRCC2O43543 280 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 CALUO43852 315 aaPredicted RBP2.52□□□□□ -2.01
PTCD3-211ENST00000476215 KRTAP5-8O75690 187 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 ASS1P00966 412 aaKnown RBP2.52□□□□□ -2.01
PTCD3-211ENST00000476215 HLA-DRAP01903 254 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 RPN2P04844 631 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 APODP05090 189 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 TPM2P07951 284 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 GTF2H1P32780 548 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 PCK1P35558 622 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 GCLMP48507 274 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 GDI2P50395 445 aaKnown RBP2.52□□□□□ -2.01
PTCD3-211ENST00000476215 AP1S2P56377 157 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 MAP3K7CLP57077 242 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 GBE1Q04446 702 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 NAB1Q13506 487 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 GABRA6Q16445 453 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 N4BP2L1Q5TBK1 243 aaPredicted RBP2.52□□□□□ -2.01
PTCD3-211ENST00000476215 SPOPLQ6IQ16 392 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 CLEC2AQ6UVW9 174 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 BBS7Q8IWZ6 715 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 SLC35G3Q8N808 338 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 TSTD1Q8NFU3 115 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 APH1AQ96BI3 265 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 OTUB2Q96DC9 234 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 C9orf72Q96LT7 481 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 C18orf15Q96N68 181 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 OPALINQ96PE5 141 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 OR4K3Q96R72 315 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 RHOXF2Q9BQY4 288 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 MARVELD1Q9BSK0 173 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 FBXO44Q9H4M3 255 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 CYP3A43Q9HB55 503 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 CSNK1G1Q9HCP0 422 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 AHSPQ9NZD4 102 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 FARSAQ9Y285 508 aaKnown RBP2.52□□□□□ -2.01
PTCD3-211ENST00000476215 CAB39Q9Y376 341 aaPredicted RBP2.52□□□□□ -2.01
PTCD3-211ENST00000476215 LRRC42Q9Y546 428 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 IGF2RP11717 2491 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 SPEGQ15772 3267 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 CACNA1EQ15878 2313 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 MIA3Q5JRA6 1907 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 ANK1P16157 1881 aa2.52□□□□□ -2.01
PTCD3-211ENST00000476215 PDCD11Q14690 1871 aaKnown RBP2.52□□□□□ -2.01
PTCD3-211ENST00000476215 MYO18AQ92614 2054 aaKnown RBP2.51□□□□□ -2.01
PTCD3-211ENST00000476215 CELSR3Q9NYQ7 3312 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 IGSF10Q6WRI0 2623 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 TICRRQ7Z2Z1 1910 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 CEACAM18A8MTB9 384 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 SUPT3HB4E1H0 165 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 CETN3O15182 167 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 STX10O60499 249 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 CTAG2O75638 210 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 P2RY2P41231 377 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 ZNF33AQ06730 810 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 INCA1Q0VD86 236 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 RPEL1Q2QD12 228 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 KLHL12Q53G59 568 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 SPINT4Q6UDR6 99 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 ANGPTL8Q6UXH0 198 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 CASP12Q6UXS9 341 aa2.51□□□□□ -2.01
PTCD3-211ENST00000476215 Q6ZSR6 202 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms