RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 TAF15Q92804 592 aaKnown RBP eCLIP19.63■□□□□ 0.732e-6■□□□□ 8.3
CPNE1-223ENST00000475146 GHSRQ92847 366 aa19.63■□□□□ 0.73
CPNE1-223ENST00000475146 FAM192AQ9GZU8 254 aa19.63■□□□□ 0.73
CPNE1-223ENST00000475146 HEXA-AS1Q9H8Q6 139 aa19.63■□□□□ 0.73
CPNE1-223ENST00000475146 RHOFQ9HBH0 211 aa19.63■□□□□ 0.73
CPNE1-223ENST00000475146 FAM181BA6NEQ2 426 aa19.62■□□□□ 0.73
CPNE1-223ENST00000475146 PSPNO60542 156 aa19.62■□□□□ 0.73
CPNE1-223ENST00000475146 CRYBA1P05813 215 aa19.62■□□□□ 0.73
CPNE1-223ENST00000475146 COX7A1P24310 79 aa19.62■□□□□ 0.73
CPNE1-223ENST00000475146 TAS2R43P59537 309 aa19.62■□□□□ 0.73
CPNE1-223ENST00000475146 ERVFRD-1P60508 538 aa19.62■□□□□ 0.73
CPNE1-223ENST00000475146 ZNF782Q6ZMW2 699 aaPredicted RBP19.62■□□□□ 0.73
CPNE1-223ENST00000475146 TPRX1Q8N7U7 411 aa19.62■□□□□ 0.73
CPNE1-223ENST00000475146 OR4S1Q8NGB4 309 aa19.62■□□□□ 0.73
CPNE1-223ENST00000475146 TNFAIP8L1Q8WVP5 186 aa19.62■□□□□ 0.73
CPNE1-223ENST00000475146 BTBD17A6NE02 478 aa19.61■□□□□ 0.73
CPNE1-223ENST00000475146 H0YHG0 523 aa19.61■□□□□ 0.73
CPNE1-223ENST00000475146 GABRPO00591 440 aa19.61■□□□□ 0.73
CPNE1-223ENST00000475146 MGST3O14880 152 aa19.61■□□□□ 0.73
CPNE1-223ENST00000475146 OR2H2O95918 312 aa19.61■□□□□ 0.73
CPNE1-223ENST00000475146 ZNF728P0DKX0 622 aa19.61■□□□□ 0.73
CPNE1-223ENST00000475146 ZNF44P15621 663 aa19.61■□□□□ 0.73
CPNE1-223ENST00000475146 IER3P46695 156 aa19.61■□□□□ 0.73
CPNE1-223ENST00000475146 OR3A1P47881 315 aa19.61■□□□□ 0.73
CPNE1-223ENST00000475146 WNT4P56705 351 aa19.61■□□□□ 0.73
CPNE1-223ENST00000475146 SCN1BQ07699 218 aa19.61■□□□□ 0.73
CPNE1-223ENST00000475146 C11orf42Q8N5U0 333 aa19.61■□□□□ 0.73
CPNE1-223ENST00000475146 NKX3-1Q99801 234 aaPredicted RBP19.61■□□□□ 0.73
CPNE1-223ENST00000475146 DPAGT1Q9H3H5 408 aa19.61■□□□□ 0.73
CPNE1-223ENST00000475146 ZNRD1Q9P1U0 126 aa19.61■□□□□ 0.73
CPNE1-223ENST00000475146 hADV38S2A0JD32 116 aa19.6■□□□□ 0.73
CPNE1-223ENST00000475146 H0YJX3 145 aa19.6■□□□□ 0.73
CPNE1-223ENST00000475146 OMGP23515 440 aa19.6■□□□□ 0.73
CPNE1-223ENST00000475146 DLX6P56179 175 aa19.6■□□□□ 0.73
CPNE1-223ENST00000475146 MEF2CQ06413 473 aaPredicted RBP19.6■□□□□ 0.73
CPNE1-223ENST00000475146 MIDNQ504T8 468 aa19.6■□□□□ 0.73
CPNE1-223ENST00000475146 YIF1BQ5BJH7 314 aa19.6■□□□□ 0.73
CPNE1-223ENST00000475146 DDI2Q5TDH0 399 aa19.6■□□□□ 0.73
CPNE1-223ENST00000475146 ORAI1Q96D31 301 aa19.6■□□□□ 0.73
CPNE1-223ENST00000475146 PGLYRP3Q96LB9 341 aa19.6■□□□□ 0.73
CPNE1-223ENST00000475146 ZNF714Q96N38 554 aa19.6■□□□□ 0.73
CPNE1-223ENST00000475146 VCX3BQ9H321 246 aa19.6■□□□□ 0.73
CPNE1-223ENST00000475146 TMEM138Q9NPI0 162 aa19.6■□□□□ 0.73
CPNE1-223ENST00000475146 FKBP14Q9NWM8 211 aa19.6■□□□□ 0.73
CPNE1-223ENST00000475146 ERGIC3Q9Y282 383 aa19.6■□□□□ 0.73
CPNE1-223ENST00000475146 TRBV5-5A0A0J9YX44 114 aa19.59■□□□□ 0.73
CPNE1-223ENST00000475146 C17orf98A8MV24 154 aa19.59■□□□□ 0.73
CPNE1-223ENST00000475146 MTNR1BP49286 362 aa19.59■□□□□ 0.73
CPNE1-223ENST00000475146 Q499Y3 187 aa19.59■□□□□ 0.73
CPNE1-223ENST00000475146 C6orf141Q5SZD1 244 aa19.59■□□□□ 0.73
CPNE1-223ENST00000475146 TCF23Q7RTU1 214 aa19.59■□□□□ 0.73
CPNE1-223ENST00000475146 PXT1Q8NFP0 134 aa19.59■□□□□ 0.73
CPNE1-223ENST00000475146 PPA2Q9H2U2 334 aa19.59■□□□□ 0.73
CPNE1-223ENST00000475146 PTGES3LE9PB15 166 aa19.58■□□□□ 0.72
CPNE1-223ENST00000475146 CDK1P06493 297 aa19.58■□□□□ 0.72
CPNE1-223ENST00000475146 BDKRB2P30411 391 aa19.58■□□□□ 0.72
CPNE1-223ENST00000475146 BMXP51813 675 aa19.58■□□□□ 0.72
CPNE1-223ENST00000475146 P2RX3P56373 397 aa19.58■□□□□ 0.72
CPNE1-223ENST00000475146 RIPK1Q13546 671 aa19.58■□□□□ 0.72
CPNE1-223ENST00000475146 TRAPPC6BQ86SZ2 158 aa19.58■□□□□ 0.72
CPNE1-223ENST00000475146 C17orf50Q8WW18 174 aa19.58■□□□□ 0.72
CPNE1-223ENST00000475146 DYRK2Q92630 601 aa19.58■□□□□ 0.72
CPNE1-223ENST00000475146 NR1H4Q96RI1 486 aaPredicted RBP19.58■□□□□ 0.72
CPNE1-223ENST00000475146 SCN3BQ9NY72 215 aa19.58■□□□□ 0.72
CPNE1-223ENST00000475146 CKLFQ9UBR5 152 aa19.58■□□□□ 0.72
CPNE1-223ENST00000475146 LINC00312Q9Y6C7 94 aa19.58■□□□□ 0.72
CPNE1-223ENST00000475146 DEGS1O15121 323 aa19.57■□□□□ 0.72
CPNE1-223ENST00000475146 GPR137BO60478 399 aa19.57■□□□□ 0.72
CPNE1-223ENST00000475146 ALDOBP05062 364 aa19.57■□□□□ 0.72
CPNE1-223ENST00000475146 CELP19835 753 aa19.57■□□□□ 0.72
CPNE1-223ENST00000475146 ZNF93P35789 620 aaPredicted RBP19.57■□□□□ 0.72
CPNE1-223ENST00000475146 OR3A4PP47883 348 aa19.57■□□□□ 0.72
CPNE1-223ENST00000475146 LGALS4P56470 323 aa19.57■□□□□ 0.72
CPNE1-223ENST00000475146 RPS11P62280 158 aaKnown RBP eCLIP19.57■□□□□ 0.72
CPNE1-223ENST00000475146 RSU1Q15404 277 aa19.57■□□□□ 0.72
CPNE1-223ENST00000475146 NANOGP1Q8N7R0 232 aa19.57■□□□□ 0.72
CPNE1-223ENST00000475146 CHST4Q8NCG5 386 aa19.57■□□□□ 0.72
CPNE1-223ENST00000475146 OR10K1Q8NGX5 313 aa19.57■□□□□ 0.72
CPNE1-223ENST00000475146 MYDGFQ969H8 173 aa19.57■□□□□ 0.72
CPNE1-223ENST00000475146 OR14A2Q96R54 314 aa19.57■□□□□ 0.72
CPNE1-223ENST00000475146 FUOMA2VDF0 154 aa19.56■□□□□ 0.72
CPNE1-223ENST00000475146 RBP4P02753 201 aa19.56■□□□□ 0.72
CPNE1-223ENST00000475146 IGHV1-8P0DP01 117 aa19.56■□□□□ 0.72
CPNE1-223ENST00000475146 LMO1P25800 156 aa19.56■□□□□ 0.72
CPNE1-223ENST00000475146 ERP29P30040 261 aaKnown RBP19.56■□□□□ 0.72
CPNE1-223ENST00000475146 RAG2P55895 527 aa19.56■□□□□ 0.72
CPNE1-223ENST00000475146 TAF9Q16594 264 aa19.56■□□□□ 0.72
CPNE1-223ENST00000475146 ELP2Q6IA86 826 aa19.56■□□□□ 0.72
CPNE1-223ENST00000475146 Q6P435 159 aa19.56■□□□□ 0.72
CPNE1-223ENST00000475146 OR13D1Q8NGV5 346 aa19.56■□□□□ 0.72
CPNE1-223ENST00000475146 MND1Q9BWT6 205 aa19.56■□□□□ 0.72
CPNE1-223ENST00000475146 ING3Q9NXR8 418 aa19.56■□□□□ 0.72
CPNE1-223ENST00000475146 ING4Q9UNL4 249 aa19.56■□□□□ 0.72
CPNE1-223ENST00000475146 DSCAML1Q8TD84 2053 aa19.55■□□□□ 0.72
CPNE1-223ENST00000475146 A0A0G2JK05 382 aa19.55■□□□□ 0.72
CPNE1-223ENST00000475146 A0A1W2PPK0 400 aa19.55■□□□□ 0.72
CPNE1-223ENST00000475146 SLC33A1O00400 549 aaPredicted RBP19.55■□□□□ 0.72
CPNE1-223ENST00000475146 HTR3BO95264 441 aa19.55■□□□□ 0.72
CPNE1-223ENST00000475146 IGFBP3P17936 291 aaPredicted RBP19.55■□□□□ 0.72
CPNE1-223ENST00000475146 MDKP21741 143 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms