RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 ANOS1P23352 680 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 LOXP28300 417 aaPredicted RBP3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 HSD11B1P28845 292 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 ZNF93P35789 620 aaPredicted RBP3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 LUMP51884 338 aaPredicted RBP3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 FOXG1P55316 489 aaPredicted RBP3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 PCBD1P61457 104 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 MRPS34P82930 218 aaKnown RBP3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 SRSF3P84103 164 aaKnown RBP3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 BSPH1Q075Z2 132 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 PDZK1IP1Q13113 114 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 DHRS2Q13268 280 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 MPPED2Q15777 294 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 HIKESHIQ53FT3 197 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 AVPI1Q5T686 147 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 LIN54Q6MZP7 749 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 FOXL2NBQ6ZUU3 175 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 RHOUQ7L0Q8 258 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 TRAPPC6BQ86SZ2 158 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 RTN4RL2Q86UN3 420 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 COMMD2Q86X83 199 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 ZNF101Q8IZC7 436 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 SPAG16Q8N0X2 631 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 SLC22A24Q8N4F4 322 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 EIF4E3Q8N5X7 224 aaKnown RBP3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 OR13C8Q8NGS7 320 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 OR2AJ1Q8NGZ0 328 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 NUDCD2Q8WVJ2 157 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 AQP3Q92482 292 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 PTX4Q96A99 478 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 ZNF251Q9BRH9 671 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 PAPOLGQ9BWT3 736 aaKnown RBP3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 TMEM231Q9H6L2 316 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 ASH1LQ9NR48 2969 aaKnown RBP3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 ZNF319Q9P2F9 582 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 ASH2LQ9UBL3 628 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 GHRLQ9UBU3 117 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 VSIG4Q9Y279 399 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 LHFPL6Q9Y693 200 aa3.59□□□□□ -1.83
GAPVD1-216ENST00000474637 PTPN13Q12923 2485 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 RELNP78509 3460 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 A0A096LPE4 126 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 A0A0A6YYH2 397 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 A0A1W2PPZ6 126 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 MEX3AA1L020 520 aaKnown RBP3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 DPRXA6NFQ7 191 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 A6NJ64 397 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 VSTM5A8MXK1 200 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 CCSO14618 274 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 HS3ST1O14792 307 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 SIAH2O43255 324 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 KCNAB3O43448 404 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 SNAPINO95295 136 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 IGLV1-44P01699 117 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 HLA-AP01891 365 aaKnown RBP3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 PMP2P02689 132 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 ERCC1P07992 297 aaPredicted RBP3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 CST2P09228 141 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 H2AFB1P0C5Y9 115 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 B4GALT1P15291 398 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 AKR1C4P17516 323 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 ADCYAP1P18509 176 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 RAB6AP20340 208 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 CD40P25942 277 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 CD34P28906 385 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 CALCRP30988 508 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 HRH1P35367 487 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 NPBWR1P48145 328 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 ZNF83P51522 516 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 IL13RA1P78552 427 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 QRFPP83859 136 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 RBM39Q14498 530 aaKnown RBP3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 SMCO1Q147U7 214 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 ATXN7L3Q14CW9 347 aaPredicted RBP3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 GFOD2Q3B7J2 385 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 ZNF672Q499Z4 452 aaPredicted RBP3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 RNASE10Q5GAN6 216 aaKnown RBP3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 AWAT2Q6E213 333 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 RAB12Q6IQ22 244 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 ALKBH2Q6NS38 261 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 GLIPR1L1Q6UWM5 242 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 C22orf34Q6ZV56 151 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 SLC16A14Q7RTX9 510 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 NAA40Q86UY6 237 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 NKAIN3Q8N8D7 197 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 TMEM104Q8NE00 496 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 MRGPRFQ96AM1 343 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 CPNE2Q96FN4 548 aaPredicted RBP3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 CYYR1Q96J86 154 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 ZNF75AQ96N20 296 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 PFDN5Q99471 154 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 NICN1Q9BSH3 213 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 ZNF471Q9BX82 626 aaPredicted RBP3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 CST11Q9H112 138 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 TLNRD1Q9H1K6 362 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 WDR13Q9H1Z4 485 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 SLC25A32Q9H2D1 315 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 NELFAQ9H3P2 528 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 BANF2Q9H503 90 aa3.59□□□□□ -1.84
GAPVD1-216ENST00000474637 PLEKHF2Q9H8W4 249 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms