RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 Q6P435 159 aa14.97□□□□□ -0.01
COL7A1-209ENST00000474432 ZNF676Q8N7Q3 588 aa14.97□□□□□ -0.01
COL7A1-209ENST00000474432 COMMD4Q9H0A8 199 aa14.97□□□□□ -0.01
COL7A1-209ENST00000474432 ZCCHC4Q9H5U6 513 aa14.97□□□□□ -0.01
COL7A1-209ENST00000474432 ZNF702PQ9H963 129 aa14.97□□□□□ -0.01
COL7A1-209ENST00000474432 GSTK1Q9Y2Q3 226 aa14.97□□□□□ -0.01
COL7A1-209ENST00000474432 SESN1Q9Y6P5 492 aa14.97□□□□□ -0.01
COL7A1-209ENST00000474432 PRKDCP78527 4128 aaKnown RBP14.97□□□□□ -0.01
COL7A1-209ENST00000474432 MPZL2O60487 215 aa14.96□□□□□ -0.01
COL7A1-209ENST00000474432 WBP4O75554 376 aaKnown RBP14.96□□□□□ -0.01
COL7A1-209ENST00000474432 ALX3O95076 343 aa14.96□□□□□ -0.01
COL7A1-209ENST00000474432 FADS2O95864 444 aaKnown RBP14.96□□□□□ -0.01
COL7A1-209ENST00000474432 CYB5AP00167 134 aa14.96□□□□□ -0.01
COL7A1-209ENST00000474432 LIMS3P0CW19 117 aa14.96□□□□□ -0.01
COL7A1-209ENST00000474432 LIMS4P0CW20 117 aa14.96□□□□□ -0.01
COL7A1-209ENST00000474432 RAB40BQ12829 278 aa14.96□□□□□ -0.01
COL7A1-209ENST00000474432 HERPUD1Q15011 391 aa14.96□□□□□ -0.01
COL7A1-209ENST00000474432 FAM189A2Q15884 450 aa14.96□□□□□ -0.01
COL7A1-209ENST00000474432 PDLIM3Q53GG5 364 aaPredicted RBP14.96□□□□□ -0.01
COL7A1-209ENST00000474432 LIAT1Q6ZQX7 453 aa14.96□□□□□ -0.01
COL7A1-209ENST00000474432 ZBTB49Q6ZSB9 765 aa14.96□□□□□ -0.01
COL7A1-209ENST00000474432 SAXO1Q8IYX7 474 aa14.96□□□□□ -0.01
COL7A1-209ENST00000474432 Q8N2B8 174 aa14.96□□□□□ -0.01
COL7A1-209ENST00000474432 PARP16Q8N5Y8 322 aa14.96□□□□□ -0.01
COL7A1-209ENST00000474432 OR4C13Q8NGP0 309 aa14.96□□□□□ -0.01
COL7A1-209ENST00000474432 RGP1Q92546 391 aaPredicted RBP14.96□□□□□ -0.01
COL7A1-209ENST00000474432 PDCD1LG2Q9BQ51 273 aa14.96□□□□□ -0.01
COL7A1-209ENST00000474432 TMEM133Q9H2Q1 129 aa14.96□□□□□ -0.01
COL7A1-209ENST00000474432 RAB18Q9NP72 206 aa14.96□□□□□ -0.01
COL7A1-209ENST00000474432 INPP5EQ9NRR6 644 aa14.96□□□□□ -0.01
COL7A1-209ENST00000474432 SERTAD4Q9NUC0 356 aa14.96□□□□□ -0.01
COL7A1-209ENST00000474432 IGHV2-26A0A0B4J1V2 119 aa14.95□□□□□ -0.02
COL7A1-209ENST00000474432 A0A0G2JK05 382 aa14.95□□□□□ -0.02
COL7A1-209ENST00000474432 GDNFP39905 211 aa14.95□□□□□ -0.02
COL7A1-209ENST00000474432 DYNLT3P51808 116 aa14.95□□□□□ -0.02
COL7A1-209ENST00000474432 GTF2A1P52655 376 aaPredicted RBP14.95□□□□□ -0.02
COL7A1-209ENST00000474432 IL18R1Q13478 541 aa14.95□□□□□ -0.02
COL7A1-209ENST00000474432 HABP2Q14520 560 aaPredicted RBP14.95□□□□□ -0.02
COL7A1-209ENST00000474432 CDK5R1Q15078 307 aa14.95□□□□□ -0.02
COL7A1-209ENST00000474432 SMN1Q16637 294 aaKnown RBP14.95□□□□□ -0.02
COL7A1-209ENST00000474432 XAF1Q6GPH4 301 aa14.95□□□□□ -0.02
COL7A1-209ENST00000474432 ZNF529Q6P280 563 aa14.95□□□□□ -0.02
COL7A1-209ENST00000474432 WIPF2Q8TF74 440 aaPredicted RBP14.95□□□□□ -0.02
COL7A1-209ENST00000474432 CORO2AQ92828 525 aa14.95□□□□□ -0.02
COL7A1-209ENST00000474432 FOXRED1Q96CU9 486 aaPredicted RBP14.95□□□□□ -0.02
COL7A1-209ENST00000474432 COQ2Q96H96 371 aa14.95□□□□□ -0.02
COL7A1-209ENST00000474432 Q96MT0 163 aa14.95□□□□□ -0.02
COL7A1-209ENST00000474432 JAM3Q9BX67 310 aa14.95□□□□□ -0.02
COL7A1-209ENST00000474432 CDCA4Q9BXL8 241 aa14.95□□□□□ -0.02
COL7A1-209ENST00000474432 FGF20Q9NP95 211 aaPredicted RBP14.95□□□□□ -0.02
COL7A1-209ENST00000474432 UBE2J1Q9Y385 318 aaPredicted RBP14.95□□□□□ -0.02
COL7A1-209ENST00000474432 SH2D1BO14796 132 aa14.94□□□□□ -0.02
COL7A1-209ENST00000474432 GLIPR1P48060 266 aa14.94□□□□□ -0.02
COL7A1-209ENST00000474432 AESQ08117 197 aa14.94□□□□□ -0.02
COL7A1-209ENST00000474432 DYNC1I2Q13409 638 aaKnown RBP14.94□□□□□ -0.02
COL7A1-209ENST00000474432 KISS1Q15726 138 aa14.94□□□□□ -0.02
COL7A1-209ENST00000474432 UTF1Q5T230 341 aa14.94□□□□□ -0.02
COL7A1-209ENST00000474432 MINOS1Q5TGZ0 78 aa14.94□□□□□ -0.02
COL7A1-209ENST00000474432 C11orf88Q6PI97 169 aa14.94□□□□□ -0.02
COL7A1-209ENST00000474432 Q6ZS46 218 aa14.94□□□□□ -0.02
COL7A1-209ENST00000474432 TMEM219Q86XT9 240 aa14.94□□□□□ -0.02
COL7A1-209ENST00000474432 C10orf67Q8IYJ2 551 aa14.94□□□□□ -0.02
COL7A1-209ENST00000474432 KLHDC1Q8N7A1 406 aa14.94□□□□□ -0.02
COL7A1-209ENST00000474432 OR4P4Q8NGL7 312 aa14.94□□□□□ -0.02
COL7A1-209ENST00000474432 OR5AK2Q8NH90 309 aa14.94□□□□□ -0.02
COL7A1-209ENST00000474432 OR2T6Q8NHC8 308 aa14.94□□□□□ -0.02
COL7A1-209ENST00000474432 RPS4Y2Q8TD47 263 aa14.94□□□□□ -0.02
COL7A1-209ENST00000474432 NPFFR1Q9GZQ6 430 aa14.94□□□□□ -0.02
COL7A1-209ENST00000474432 EXOSC4Q9NPD3 245 aaKnown RBP14.94□□□□□ -0.02
COL7A1-209ENST00000474432 MINOS1-NBL1R4GNA1 71 aa14.94□□□□□ -0.02
COL7A1-209ENST00000474432 TMEM212A6NML5 194 aa14.93□□□□□ -0.02
COL7A1-209ENST00000474432 FAM90A22PA8MWA6 464 aa14.93□□□□□ -0.02
COL7A1-209ENST00000474432 SLC33A1O00400 549 aaPredicted RBP14.93□□□□□ -0.02
COL7A1-209ENST00000474432 SULT1B1O43704 296 aa14.93□□□□□ -0.02
COL7A1-209ENST00000474432 SERPINA12Q8IW75 414 aa14.93□□□□□ -0.02
COL7A1-209ENST00000474432 C11orf44Q8N8P7 122 aa14.93□□□□□ -0.02
COL7A1-209ENST00000474432 OR51A2Q8NGJ7 313 aa14.93□□□□□ -0.02
COL7A1-209ENST00000474432 FAM110DQ8TAY7 271 aaPredicted RBP14.93□□□□□ -0.02
COL7A1-209ENST00000474432 MRPL48Q96GC5 212 aaKnown RBP14.93□□□□□ -0.02
COL7A1-209ENST00000474432 CLEC7AQ9BXN2 247 aa14.93□□□□□ -0.02
COL7A1-209ENST00000474432 RHOFQ9HBH0 211 aa14.93□□□□□ -0.02
COL7A1-209ENST00000474432 RPL36Q9Y3U8 105 aaKnown RBP14.93□□□□□ -0.02
COL7A1-209ENST00000474432 HILPDAQ9Y5L2 63 aa14.93□□□□□ -0.02
COL7A1-209ENST00000474432 CSN2P05814 226 aa14.92□□□□□ -0.02
COL7A1-209ENST00000474432 MRPL28Q13084 256 aaKnown RBP14.92□□□□□ -0.02
COL7A1-209ENST00000474432 C2orf68Q2NKX9 166 aa14.92□□□□□ -0.02
COL7A1-209ENST00000474432 FBLN7Q53RD9 439 aa14.92□□□□□ -0.02
COL7A1-209ENST00000474432 PRAMEF5Q5TYX0 476 aa14.92□□□□□ -0.02
COL7A1-209ENST00000474432 LPCAT4Q643R3 524 aa14.92□□□□□ -0.02
COL7A1-209ENST00000474432 HEPN1Q6WQI6 88 aa14.92□□□□□ -0.02
COL7A1-209ENST00000474432 Q6ZTK2 550 aa14.92□□□□□ -0.02
COL7A1-209ENST00000474432 OR5D14Q8NGL3 314 aa14.92□□□□□ -0.02
COL7A1-209ENST00000474432 NKX3-1Q99801 234 aaPredicted RBP14.92□□□□□ -0.02
COL7A1-209ENST00000474432 GLS2Q9UI32 602 aa14.92□□□□□ -0.02
COL7A1-209ENST00000474432 SIRT4Q9Y6E7 314 aaPredicted RBP14.92□□□□□ -0.02
COL7A1-209ENST00000474432 EBAG9O00559 213 aa14.91□□□□□ -0.02
COL7A1-209ENST00000474432 PLXNB1O43157 2135 aa14.91□□□□□ -0.02
COL7A1-209ENST00000474432 IGLV1-47P01700 117 aa14.91□□□□□ -0.02
COL7A1-209ENST00000474432 CSF1P09603 554 aa14.91□□□□□ -0.02
COL7A1-209ENST00000474432 CCDC159P0C7I6 412 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms