RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 GIPP09681 153 aaPredicted RBP5.73□□□□□ -1.49
CKS1B-205ENST00000473344 CTLA4P16410 223 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 SPI1P17947 270 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 RAB4AP20338 218 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 PVALBP20472 110 aaPredicted RBP5.73□□□□□ -1.49
CKS1B-205ENST00000473344 AZGP1P25311 298 aaKnown RBP5.73□□□□□ -1.49
CKS1B-205ENST00000473344 SLC6A1P30531 599 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 KDELR2P33947 212 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 RPS19P39019 145 aaKnown RBP5.73□□□□□ -1.49
CKS1B-205ENST00000473344 PSMB10P40306 273 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 RPL35P42766 123 aaKnown RBP5.73□□□□□ -1.49
CKS1B-205ENST00000473344 PROK1P58294 105 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 SMIM11AP58511 58 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 KRTAP10-3P60369 221 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 SELENOWP63302 87 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 OPCMLQ14982 345 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 TRAM2Q15035 370 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 OR8B8Q15620 311 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 TRAM1Q15629 374 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 MESTQ5EB52 335 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 OTPQ5XKR4 325 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 HIST2H2BDQ6DRA6 164 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 SFRP4Q6FHJ7 346 aaPredicted RBP5.73□□□□□ -1.49
CKS1B-205ENST00000473344 DHRS7BQ6IAN0 325 aaPredicted RBP5.73□□□□□ -1.49
CKS1B-205ENST00000473344 HAGHLQ6PII5 290 aaPredicted RBP5.73□□□□□ -1.49
CKS1B-205ENST00000473344 DNM1P34Q6PK57 102 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 ZNF841Q6ZN19 808 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 PTCHD4Q6ZW05 846 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 CBLL1Q75N03 491 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 KRT77Q7Z794 578 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.73□□□□□ -1.49
CKS1B-205ENST00000473344 LAX1Q8IWV1 398 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 MS4A15Q8N5U1 240 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 DTX3Q8N9I9 347 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 BOLLQ8N9W6 283 aaKnown RBP5.73□□□□□ -1.49
CKS1B-205ENST00000473344 LRRC75AQ8NAA5 344 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 OR52N1Q8NH53 320 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 OR56B4Q8NH76 319 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 SPRYD4Q8WW59 207 aaPredicted RBP5.73□□□□□ -1.49
CKS1B-205ENST00000473344 ACOT11Q8WXI4 607 aaPredicted RBP5.73□□□□□ -1.49
CKS1B-205ENST00000473344 Q96M85 177 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 OR5M11Q96RB7 305 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 SOSTQ9BQB4 213 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 GINS4Q9BRT9 223 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 TEX12Q9BXU0 123 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 NKX6-2Q9C056 277 aaPredicted RBP5.73□□□□□ -1.49
CKS1B-205ENST00000473344 SYT4Q9H2B2 425 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 OPA3Q9H6K4 179 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 FN3KRPQ9HA64 309 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 NMNAT1Q9HAN9 279 aaPredicted RBP5.73□□□□□ -1.49
CKS1B-205ENST00000473344 BABAM2Q9NXR7 383 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 RHCGQ9UBD6 479 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 RNF7Q9UBF6 113 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 A4GNTQ9UNA3 340 aa5.73□□□□□ -1.49
CKS1B-205ENST00000473344 COA3Q9Y2R0 106 aaPredicted RBP5.73□□□□□ -1.49
CKS1B-205ENST00000473344 EXOSC1Q9Y3B2 195 aaKnown RBP5.73□□□□□ -1.49
CKS1B-205ENST00000473344 NOP16Q9Y3C1 178 aaKnown RBP5.73□□□□□ -1.49
CKS1B-205ENST00000473344 KMT2CQ8NEZ4 4911 aaKnown RBP5.72□□□□□ -1.49
CKS1B-205ENST00000473344 TRAV38-1A0A0B4J264 116 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 A0A0U1RQK1 487 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 RAB19A4D1S5 217 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 C5orf63A6NC05 138 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 ANKRD61A6NGH8 418 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 F5H5K5 113 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 TNFRSF11BO00300 401 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 IMPA2O14732 288 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 PIN1P1O15428 100 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 SSNA1O43805 119 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 ENTPD6O75354 484 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 GPX5O75715 221 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 LCATP04180 440 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 FBP1P09467 338 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 UBBP0CG47 229 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 UBCP0CG48 685 aaKnown RBP5.72□□□□□ -1.49
CKS1B-205ENST00000473344 SULT1A3P0DMM9 295 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 SULT1A4P0DMN0 295 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 MMP9P14780 707 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 CPEP16870 476 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 BTF3P20290 206 aaKnown RBP5.72□□□□□ -1.49
CKS1B-205ENST00000473344 PRKACGP22612 351 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 C21orf33P30042 268 aaPredicted RBP5.72□□□□□ -1.49
CKS1B-205ENST00000473344 SDHAP31040 664 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 GABRA5P31644 462 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 PMELP40967 661 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 CD200P41217 278 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 GPR4P46093 362 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 IER3P46695 156 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 GZMMP51124 257 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 ARF6P62330 175 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 RPS27AP62979 156 aaKnown RBP5.72□□□□□ -1.49
CKS1B-205ENST00000473344 DYRK1AQ13627 763 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 GK2Q14410 553 aaPredicted RBP5.72□□□□□ -1.49
CKS1B-205ENST00000473344 FCN2Q15485 313 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 OR8G1Q15617 311 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 CLEC12AQ5QGZ9 265 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 PRAMEF6Q5VXH4 476 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 TMPRSS11FQ6ZWK6 438 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 MBOAT2Q6ZWT7 520 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 BTN2A1Q7KYR7 527 aa5.72□□□□□ -1.49
CKS1B-205ENST00000473344 MRPL21Q7Z2W9 205 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms