RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 MCFD2Q8NI22 146 aa14.09□□□□□ -0.15
CCM2-205ENST00000472223 NEK7Q8TDX7 302 aa14.09□□□□□ -0.15
CCM2-205ENST00000472223 S100A16Q96FQ6 103 aaKnown RBP14.09□□□□□ -0.15
CCM2-205ENST00000472223 CMTM3Q96MX0 182 aa14.09□□□□□ -0.15
CCM2-205ENST00000472223 PATZ1Q9HBE1 687 aaKnown RBP14.09□□□□□ -0.15
CCM2-205ENST00000472223 DIABLOQ9NR28 239 aa14.09□□□□□ -0.15
CCM2-205ENST00000472223 KAAG1Q9UBP8 84 aa14.09□□□□□ -0.15
CCM2-205ENST00000472223 IGKV1D-17A0A075B6S4 117 aa14.08□□□□□ -0.16
CCM2-205ENST00000472223 FUOMA2VDF0 154 aa14.08□□□□□ -0.16
CCM2-205ENST00000472223 CEACAM18A8MTB9 384 aa14.08□□□□□ -0.16
CCM2-205ENST00000472223 MCRIP1C9JLW8 97 aa14.08□□□□□ -0.16
CCM2-205ENST00000472223 SIRPB1O00241 398 aa14.08□□□□□ -0.16
CCM2-205ENST00000472223 OR2H2O95918 312 aa14.08□□□□□ -0.16
CCM2-205ENST00000472223 UNC119Q13432 240 aa14.08□□□□□ -0.16
CCM2-205ENST00000472223 ARL6IP1Q15041 203 aa14.08□□□□□ -0.16
CCM2-205ENST00000472223 ESCO2Q56NI9 601 aa14.08□□□□□ -0.16
CCM2-205ENST00000472223 UBE2NLQ5JXB2 153 aa14.08□□□□□ -0.16
CCM2-205ENST00000472223 ZNF788Q6ZQV5 615 aa14.08□□□□□ -0.16
CCM2-205ENST00000472223 TMEM185AQ8NFB2 350 aa14.08□□□□□ -0.16
CCM2-205ENST00000472223 RAB40AQ8WXH6 277 aa14.08□□□□□ -0.16
CCM2-205ENST00000472223 SDSLQ96GA7 329 aa14.08□□□□□ -0.16
CCM2-205ENST00000472223 SNX22Q96L94 193 aa14.08□□□□□ -0.16
CCM2-205ENST00000472223 Q96M66 194 aa14.08□□□□□ -0.16
CCM2-205ENST00000472223 TM2D1Q9BX74 207 aa14.08□□□□□ -0.16
CCM2-205ENST00000472223 C6orf62Q9GZU0 229 aaPredicted RBP14.08□□□□□ -0.16
CCM2-205ENST00000472223 FAM234AQ9H0X4 552 aa14.08□□□□□ -0.16
CCM2-205ENST00000472223 KCNK15Q9H427 330 aa14.08□□□□□ -0.16
CCM2-205ENST00000472223 RHBDL2Q9NX52 303 aa14.08□□□□□ -0.16
CCM2-205ENST00000472223 IL36RNQ9UBH0 155 aa14.08□□□□□ -0.16
CCM2-205ENST00000472223 FAM25AB3EWG3 89 aa14.07□□□□□ -0.16
CCM2-205ENST00000472223 FAM25CB3EWG5 89 aa14.07□□□□□ -0.16
CCM2-205ENST00000472223 FAM25GB3EWG6 89 aa14.07□□□□□ -0.16
CCM2-205ENST00000472223 LDLRAD4O15165 306 aa14.07□□□□□ -0.16
CCM2-205ENST00000472223 GPR37O15354 613 aa14.07□□□□□ -0.16
CCM2-205ENST00000472223 SIGLEC5O15389 551 aa14.07□□□□□ -0.16
CCM2-205ENST00000472223 FUT3P21217 361 aa14.07□□□□□ -0.16
CCM2-205ENST00000472223 BLVRBP30043 206 aaPredicted RBP14.07□□□□□ -0.16
CCM2-205ENST00000472223 S100A5P33763 92 aa14.07□□□□□ -0.16
CCM2-205ENST00000472223 TALDO1P37837 337 aa14.07□□□□□ -0.16
CCM2-205ENST00000472223 CEBPDP49716 269 aaPredicted RBP14.07□□□□□ -0.16
CCM2-205ENST00000472223 VEGFCP49767 419 aa14.07□□□□□ -0.16
CCM2-205ENST00000472223 GNB2P62879 340 aa14.07□□□□□ -0.16
CCM2-205ENST00000472223 PAN3Q58A45 887 aaKnown RBP14.07□□□□□ -0.16
CCM2-205ENST00000472223 NKAPLQ5M9Q1 402 aa14.07□□□□□ -0.16
CCM2-205ENST00000472223 GDPD3Q7L5L3 318 aa14.07□□□□□ -0.16
CCM2-205ENST00000472223 CD177Q8N6Q3 437 aa14.07□□□□□ -0.16
CCM2-205ENST00000472223 CLDND2Q8NHS1 167 aa14.07□□□□□ -0.16
CCM2-205ENST00000472223 REG4Q9BYZ8 158 aa14.07□□□□□ -0.16
CCM2-205ENST00000472223 LPAR5Q9H1C0 372 aa14.07□□□□□ -0.16
CCM2-205ENST00000472223 IFT22Q9H7X7 185 aa14.07□□□□□ -0.16
CCM2-205ENST00000472223 PLEKHJ1Q9NW61 149 aa14.07□□□□□ -0.16
CCM2-205ENST00000472223 SLC25A10Q9UBX3 287 aaPredicted RBP14.07□□□□□ -0.16
CCM2-205ENST00000472223 CLN8Q9UBY8 286 aa14.07□□□□□ -0.16
CCM2-205ENST00000472223 PEX16Q9Y5Y5 336 aa14.07□□□□□ -0.16
CCM2-205ENST00000472223 A0A0A6YYH2 397 aa14.06□□□□□ -0.16
CCM2-205ENST00000472223 A6NJ64 397 aa14.06□□□□□ -0.16
CCM2-205ENST00000472223 RNF223E7ERA6 249 aa14.06□□□□□ -0.16
CCM2-205ENST00000472223 GLAP06280 429 aa14.06□□□□□ -0.16
CCM2-205ENST00000472223 WNT2P09544 360 aa14.06□□□□□ -0.16
CCM2-205ENST00000472223 NDUFB7P17568 137 aa14.06□□□□□ -0.16
CCM2-205ENST00000472223 LMO1P25800 156 aa14.06□□□□□ -0.16
CCM2-205ENST00000472223 KCNJ3P48549 501 aa14.06□□□□□ -0.16
CCM2-205ENST00000472223 MRPS15P82914 257 aaKnown RBP14.06□□□□□ -0.16
CCM2-205ENST00000472223 PDCD1Q15116 288 aa14.06□□□□□ -0.16
CCM2-205ENST00000472223 FOXB2Q5VYV0 432 aa14.06□□□□□ -0.16
CCM2-205ENST00000472223 CD276Q5ZPR3 534 aa14.06□□□□□ -0.16
CCM2-205ENST00000472223 LYPD2Q6UXB3 125 aa14.06□□□□□ -0.16
CCM2-205ENST00000472223 Q6ZTK2 550 aa14.06□□□□□ -0.16
CCM2-205ENST00000472223 ZNRF1Q8ND25 227 aa14.06□□□□□ -0.16
CCM2-205ENST00000472223 OR5H6Q8NGV6 325 aa14.06□□□□□ -0.16
CCM2-205ENST00000472223 GAFA1Q96PS6 74 aa14.06□□□□□ -0.16
CCM2-205ENST00000472223 MMP27Q9H306 513 aa14.06□□□□□ -0.16
CCM2-205ENST00000472223 ZNF222Q9UK12 451 aa14.06□□□□□ -0.16
CCM2-205ENST00000472223 A0A075B6Q4 140 aa14.05□□□□□ -0.16
CCM2-205ENST00000472223 DVL1O14640 695 aa14.05□□□□□ -0.16
CCM2-205ENST00000472223 PDCD6O75340 191 aa14.05□□□□□ -0.16
CCM2-205ENST00000472223 FOXH1O75593 365 aa14.05□□□□□ -0.16
CCM2-205ENST00000472223 IGHV2-5P01817 119 aa14.05□□□□□ -0.16
CCM2-205ENST00000472223 APOA1P02647 267 aa14.05□□□□□ -0.16
CCM2-205ENST00000472223 TK1P04183 234 aa14.05□□□□□ -0.16
CCM2-205ENST00000472223 LOXL1Q08397 574 aaPredicted RBP14.05□□□□□ -0.16
CCM2-205ENST00000472223 GRK1Q15835 563 aa14.05□□□□□ -0.16
CCM2-205ENST00000472223 Q6P435 159 aa14.05□□□□□ -0.16
CCM2-205ENST00000472223 FAM89BQ8N5H3 189 aa14.05□□□□□ -0.16
CCM2-205ENST00000472223 FAM216BQ8N7L0 139 aa14.05□□□□□ -0.16
CCM2-205ENST00000472223 SUMF2Q8NBJ7 301 aa14.05□□□□□ -0.16
CCM2-205ENST00000472223 WFDC11Q8NEX6 87 aa14.05□□□□□ -0.16
CCM2-205ENST00000472223 OR10R2Q8NGX6 335 aa14.05□□□□□ -0.16
CCM2-205ENST00000472223 ST8SIA4Q92187 359 aa14.05□□□□□ -0.16
CCM2-205ENST00000472223 RAB3CQ96E17 227 aa14.05□□□□□ -0.16
CCM2-205ENST00000472223 DPCDQ9BVM2 203 aaPredicted RBP14.05□□□□□ -0.16
CCM2-205ENST00000472223 SSBP3Q9BWW4 388 aaPredicted RBP14.05□□□□□ -0.16
CCM2-205ENST00000472223 A3GALT2U3KPV4 340 aa14.05□□□□□ -0.16
CCM2-205ENST00000472223 PDZD2O15018 2839 aa14.05□□□□□ -0.16
CCM2-205ENST00000472223 IGHV4-61A0A0C4DH41 118 aa14.04□□□□□ -0.16
CCM2-205ENST00000472223 H7C1Q1 480 aa14.04□□□□□ -0.16
CCM2-205ENST00000472223 K7N7A8 449 aa14.04□□□□□ -0.16
CCM2-205ENST00000472223 SLC33A1O00400 549 aaPredicted RBP14.04□□□□□ -0.16
CCM2-205ENST00000472223 HSPB6O14558 160 aa14.04□□□□□ -0.16
CCM2-205ENST00000472223 TNFRSF13BO14836 293 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms