RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 LIN9Q5TKA1 542 aa1.78□□□□□ -2.12
PTCD3-209ENST00000472044 ZNF660Q6AZW8 331 aaPredicted RBP1.78□□□□□ -2.12
PTCD3-209ENST00000472044 HCP5Q6MZN7 132 aa1.78□□□□□ -2.12
PTCD3-209ENST00000472044 PAGE2Q7Z2X7 111 aa1.78□□□□□ -2.12
PTCD3-209ENST00000472044 RBM45Q8IUH3 476 aaKnown RBP1.78□□□□□ -2.12
PTCD3-209ENST00000472044 SPICQ8N5J4 248 aa1.78□□□□□ -2.12
PTCD3-209ENST00000472044 CMTM2Q8TAZ6 248 aa1.78□□□□□ -2.12
PTCD3-209ENST00000472044 BLNKQ8WV28 456 aa1.78□□□□□ -2.12
PTCD3-209ENST00000472044 CCL17Q92583 94 aa1.78□□□□□ -2.12
PTCD3-209ENST00000472044 LRRC39Q96DD0 335 aa1.78□□□□□ -2.12
PTCD3-209ENST00000472044 HINT2Q9BX68 163 aa1.78□□□□□ -2.12
PTCD3-209ENST00000472044 ABCG5Q9H222 651 aa1.78□□□□□ -2.12
PTCD3-209ENST00000472044 DIABLOQ9NR28 239 aa1.78□□□□□ -2.12
PTCD3-209ENST00000472044 ASF1BQ9NVP2 202 aa1.78□□□□□ -2.12
PTCD3-209ENST00000472044 SLC22A14Q9Y267 594 aa1.78□□□□□ -2.12
PTCD3-209ENST00000472044 CARHSP1Q9Y2V2 147 aaKnown RBP1.78□□□□□ -2.12
PTCD3-209ENST00000472044 IGHV3-21A0A0B4J1V1 117 aa1.77□□□□□ -2.13
PTCD3-209ENST00000472044 MYBPHLA2RUH7 354 aa1.77□□□□□ -2.13
PTCD3-209ENST00000472044 RBFOX3A6NFN3 312 aa1.77□□□□□ -2.13
PTCD3-209ENST00000472044 CPSF4O95639 269 aaKnown RBP1.77□□□□□ -2.13
PTCD3-209ENST00000472044 HLA-AP01891 365 aaKnown RBP1.77□□□□□ -2.13
PTCD3-209ENST00000472044 ELK4P28324 431 aa1.77□□□□□ -2.13
PTCD3-209ENST00000472044 GCLMP48507 274 aa1.77□□□□□ -2.13
PTCD3-209ENST00000472044 TTPAP49638 278 aa1.77□□□□□ -2.13
PTCD3-209ENST00000472044 CCL23P55773 120 aa1.77□□□□□ -2.13
PTCD3-209ENST00000472044 SLC9A3R2Q15599 337 aa1.77□□□□□ -2.13
PTCD3-209ENST00000472044 TTMPQ5BVD1 217 aa1.77□□□□□ -2.13
PTCD3-209ENST00000472044 ZNF773Q6PK81 442 aa1.77□□□□□ -2.13
PTCD3-209ENST00000472044 Q6ZQT7 251 aa1.77□□□□□ -2.13
PTCD3-209ENST00000472044 GALNT10Q86SR1 603 aa1.77□□□□□ -2.13
PTCD3-209ENST00000472044 CPNE9Q8IYJ1 553 aa1.77□□□□□ -2.13
PTCD3-209ENST00000472044 ZFP82Q8N141 532 aa1.77□□□□□ -2.13
PTCD3-209ENST00000472044 DRAXINQ8NBI3 349 aaPredicted RBP1.77□□□□□ -2.13
PTCD3-209ENST00000472044 OR2M3Q8NG83 312 aa1.77□□□□□ -2.13
PTCD3-209ENST00000472044 OR2K2Q8NGT1 345 aa1.77□□□□□ -2.13
PTCD3-209ENST00000472044 LRRC20Q8TCA0 184 aa1.77□□□□□ -2.13
PTCD3-209ENST00000472044 PYURFQ96I23 114 aa1.77□□□□□ -2.13
PTCD3-209ENST00000472044 ZNF396Q96N95 335 aaPredicted RBP1.77□□□□□ -2.13
PTCD3-209ENST00000472044 BIRC8Q96P09 236 aa1.77□□□□□ -2.13
PTCD3-209ENST00000472044 BEX2Q9BXY8 128 aa1.77□□□□□ -2.13
PTCD3-209ENST00000472044 RBM12B-AS1Q9P1G2 102 aa1.77□□□□□ -2.13
PTCD3-209ENST00000472044 CLEC2DQ9UHP7 191 aa1.77□□□□□ -2.13
PTCD3-209ENST00000472044 RBMX2Q9Y388 322 aaKnown RBP1.77□□□□□ -2.13
PTCD3-209ENST00000472044 ZNF706Q9Y5V0 76 aaPredicted RBP1.77□□□□□ -2.13
PTCD3-209ENST00000472044 SYNRGQ9UMZ2 1314 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 PGPA6NDG6 321 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 MGAT4DA6NG13 374 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 LEUTXA8MZ59 168 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 hCG_2039718K7EN88 272 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 K7ERS5 55 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 CBR3O75828 277 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 MYO1DO94832 1006 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 IGHV3-53P01767 116 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 SOD3P08294 240 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 MLNP12872 115 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 CCL2P13500 99 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 PRTN3P24158 256 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 IL12BP29460 328 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 GTF2H1P32780 548 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 RANBP1P43487 201 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 VSNL1P62760 191 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 PSG3Q16557 428 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 ACTL9Q8TC94 416 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 NELFBQ8WX92 580 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 FXYD5Q96DB9 178 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 FMC1Q96HJ9 113 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 TXNIPQ9H3M7 391 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 XKR8Q9H6D3 395 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 RHOFQ9HBH0 211 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 C14orf166Q9Y224 244 aaKnown RBP1.76□□□□□ -2.13
PTCD3-209ENST00000472044 ICOSQ9Y6W8 199 aa1.76□□□□□ -2.13
PTCD3-209ENST00000472044 ATRNO75882 1429 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 LTBP2Q14767 1821 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 RAB19A4D1S5 217 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 ZNF729A6NN14 1252 aaPredicted RBP1.75□□□□□ -2.13
PTCD3-209ENST00000472044 BOLA2-SMG1P6H3BVE0 249 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 TRGV3P03979 118 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 SCGB1C2P0DMR2 95 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 M6PRP20645 277 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 LGALS7P47929 136 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 TSPAN5P62079 268 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 BAXQ07812 192 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 TMEM241Q24JQ0 296 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 ERICH5Q6P6B1 374 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 SMARCD3Q6STE5 483 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 Q6ZT83 130 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 SSX6Q7RTT6 188 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 ACBD4Q8NC06 268 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 LY6G5BQ8NDX9 201 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 BPIFB6Q8NFQ5 453 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 OR8G5Q8NG78 346 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 OR4K17Q8NGC6 315 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 OR2Y1Q8NGV0 311 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 OR6K3Q8NGY3 331 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 CLHC1Q8NHS4 586 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 SCGB1C1Q8TD33 95 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 CPB2Q96IY4 423 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 OLFM3Q96PB7 478 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 PITX2Q99697 317 aa1.75□□□□□ -2.13
PTCD3-209ENST00000472044 SIKE1Q9BRV8 207 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms