RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 ING4Q9UNL4 249 aa14.61□□□□□ -0.07
VPS72-204ENST00000471423 MRPS28Q9Y2Q9 187 aaKnown RBP14.61□□□□□ -0.07
VPS72-204ENST00000471423 SH2D1BO14796 132 aa14.6□□□□□ -0.07
VPS72-204ENST00000471423 PSPNO60542 156 aa14.6□□□□□ -0.07
VPS72-204ENST00000471423 HTR3BO95264 441 aa14.6□□□□□ -0.07
VPS72-204ENST00000471423 IFNA2P01563 188 aa14.6□□□□□ -0.07
VPS72-204ENST00000471423 IGHV4-38-2P0DP08 117 aa14.6□□□□□ -0.07
VPS72-204ENST00000471423 ZNF44P15621 663 aa14.6□□□□□ -0.07
VPS72-204ENST00000471423 RPL31P62899 125 aaKnown RBP14.6□□□□□ -0.07
VPS72-204ENST00000471423 FABP5Q01469 135 aa14.6□□□□□ -0.07
VPS72-204ENST00000471423 SCN1BQ07699 218 aa14.6□□□□□ -0.07
VPS72-204ENST00000471423 PDCD1Q15116 288 aa14.6□□□□□ -0.07
VPS72-204ENST00000471423 PIGYQ3MUY2 71 aa14.6□□□□□ -0.07
VPS72-204ENST00000471423 LRRTM1Q86UE6 522 aa14.6□□□□□ -0.07
VPS72-204ENST00000471423 LYPD6Q86Y78 171 aa14.6□□□□□ -0.07
VPS72-204ENST00000471423 CDH26Q8IXH8 852 aa14.6□□□□□ -0.07
VPS72-204ENST00000471423 OR8H2Q8N162 312 aa14.6□□□□□ -0.07
VPS72-204ENST00000471423 KIR3DL3Q8N743 410 aa14.6□□□□□ -0.07
VPS72-204ENST00000471423 OR4M1Q8NGD0 313 aa14.6□□□□□ -0.07
VPS72-204ENST00000471423 OR4D6Q8NGJ1 314 aa14.6□□□□□ -0.07
VPS72-204ENST00000471423 PHYHIPQ92561 330 aa14.6□□□□□ -0.07
VPS72-204ENST00000471423 IL36GQ9NZH8 169 aa14.6□□□□□ -0.07
VPS72-204ENST00000471423 KPTNQ9Y664 436 aa14.6□□□□□ -0.07
VPS72-204ENST00000471423 SRMP19623 302 aa14.59□□□□□ -0.07
VPS72-204ENST00000471423 SERPINA2P20848 420 aa14.59□□□□□ -0.07
VPS72-204ENST00000471423 SCGB2A2Q13296 93 aa14.59□□□□□ -0.07
VPS72-204ENST00000471423 EDDM3AQ14507 147 aa14.59□□□□□ -0.07
VPS72-204ENST00000471423 GRK1Q15835 563 aa14.59□□□□□ -0.07
VPS72-204ENST00000471423 SLC22A6Q4U2R8 563 aa14.59□□□□□ -0.07
VPS72-204ENST00000471423 AWAT2Q6E213 333 aa14.59□□□□□ -0.07
VPS72-204ENST00000471423 Q6P435 159 aa14.59□□□□□ -0.07
VPS72-204ENST00000471423 GDPD3Q7L5L3 318 aa14.59□□□□□ -0.07
VPS72-204ENST00000471423 VMO1Q7Z5L0 202 aa14.59□□□□□ -0.07
VPS72-204ENST00000471423 CMTM4Q8IZR5 234 aa14.59□□□□□ -0.07
VPS72-204ENST00000471423 Q8NFD4 153 aa14.59□□□□□ -0.07
VPS72-204ENST00000471423 OR4S1Q8NGB4 309 aa14.59□□□□□ -0.07
VPS72-204ENST00000471423 C22orf15Q8WYQ4 148 aa14.59□□□□□ -0.07
VPS72-204ENST00000471423 DMRTB1Q96MA1 342 aa14.59□□□□□ -0.07
VPS72-204ENST00000471423 NUP50Q9UKX7 468 aa14.59□□□□□ -0.07
VPS72-204ENST00000471423 A0A1W2PP11 408 aa14.58□□□□□ -0.08
VPS72-204ENST00000471423 MEGF11A6BM72 1044 aa14.58□□□□□ -0.08
VPS72-204ENST00000471423 CCRL2O00421 344 aa14.58□□□□□ -0.08
VPS72-204ENST00000471423 ARL6IP5O75915 188 aa14.58□□□□□ -0.08
VPS72-204ENST00000471423 TNFAIP8O95379 198 aa14.58□□□□□ -0.08
VPS72-204ENST00000471423 CSTBP04080 98 aaKnown RBP14.58□□□□□ -0.08
VPS72-204ENST00000471423 CALRP27797 417 aaKnown RBP14.58□□□□□ -0.08
VPS72-204ENST00000471423 OR3A1P47881 315 aa14.58□□□□□ -0.08
VPS72-204ENST00000471423 EDDM3BP56851 147 aa14.58□□□□□ -0.08
VPS72-204ENST00000471423 IL13RA2Q14627 380 aa14.58□□□□□ -0.08
VPS72-204ENST00000471423 GLIPR1L1Q6UWM5 242 aa14.58□□□□□ -0.08
VPS72-204ENST00000471423 OSR2Q8N2R0 312 aa14.58□□□□□ -0.08
VPS72-204ENST00000471423 OR51T1Q8NGJ9 327 aa14.58□□□□□ -0.08
VPS72-204ENST00000471423 OR5D13Q8NGL4 314 aa14.58□□□□□ -0.08
VPS72-204ENST00000471423 UQCC2Q9BRT2 126 aa14.58□□□□□ -0.08
VPS72-204ENST00000471423 SLITRK2Q9H156 845 aa14.58□□□□□ -0.08
VPS72-204ENST00000471423 PPA2Q9H2U2 334 aa14.58□□□□□ -0.08
VPS72-204ENST00000471423 OCEL1Q9H607 264 aa14.58□□□□□ -0.08
VPS72-204ENST00000471423 SIRT7Q9NRC8 400 aa14.58□□□□□ -0.08
VPS72-204ENST00000471423 ZNF69Q9UC07 566 aa14.58□□□□□ -0.08
VPS72-204ENST00000471423 MEX3AA1L020 520 aaKnown RBP14.57□□□□□ -0.08
VPS72-204ENST00000471423 SLC33A1O00400 549 aaPredicted RBP14.57□□□□□ -0.08
VPS72-204ENST00000471423 DEGS1O15121 323 aa14.57□□□□□ -0.08
VPS72-204ENST00000471423 ZNF780AO75290 641 aaPredicted RBP14.57□□□□□ -0.08
VPS72-204ENST00000471423 LMO1P25800 156 aa14.57□□□□□ -0.08
VPS72-204ENST00000471423 RBM11P57052 281 aaKnown RBP14.57□□□□□ -0.08
VPS72-204ENST00000471423 PRB3Q04118 309 aaPredicted RBP14.57□□□□□ -0.08
VPS72-204ENST00000471423 ZNF273Q14593 569 aa14.57□□□□□ -0.08
VPS72-204ENST00000471423 NEDD8Q15843 81 aa14.57□□□□□ -0.08
VPS72-204ENST00000471423 GLT8D1Q68CQ7 371 aa14.57□□□□□ -0.08
VPS72-204ENST00000471423 TMEM200BQ69YZ2 307 aa14.57□□□□□ -0.08
VPS72-204ENST00000471423 Q8N7P7 452 aa14.57□□□□□ -0.08
VPS72-204ENST00000471423 TPRX1Q8N7U7 411 aa14.57□□□□□ -0.08
VPS72-204ENST00000471423 CHST4Q8NCG5 386 aa14.57□□□□□ -0.08
VPS72-204ENST00000471423 PPP1R35Q8TAP8 253 aa14.57□□□□□ -0.08
VPS72-204ENST00000471423 SLC6A7Q99884 636 aa14.57□□□□□ -0.08
VPS72-204ENST00000471423 ST3GAL6Q9Y274 331 aa14.57□□□□□ -0.08
VPS72-204ENST00000471423 A0A0G2JK05 382 aa14.56□□□□□ -0.08
VPS72-204ENST00000471423 M0R1W7 72 aa14.56□□□□□ -0.08
VPS72-204ENST00000471423 HSPB6O14558 160 aa14.56□□□□□ -0.08
VPS72-204ENST00000471423 MGST3O14880 152 aa14.56□□□□□ -0.08
VPS72-204ENST00000471423 DLX1P56177 255 aa14.56□□□□□ -0.08
VPS72-204ENST00000471423 NHLRC3Q5JS37 347 aa14.56□□□□□ -0.08
VPS72-204ENST00000471423 GPR157Q5UAW9 335 aa14.56□□□□□ -0.08
VPS72-204ENST00000471423 CD200R1LQ6Q8B3 271 aa14.56□□□□□ -0.08
VPS72-204ENST00000471423 BRD3OSQ6XYD6 125 aa14.56□□□□□ -0.08
VPS72-204ENST00000471423 PDZD9Q8IXQ8 264 aa14.56□□□□□ -0.08
VPS72-204ENST00000471423 BPIFB2Q8N4F0 458 aa14.56□□□□□ -0.08
VPS72-204ENST00000471423 TBC1D15Q8TC07 691 aa14.56□□□□□ -0.08
VPS72-204ENST00000471423 LHX4Q969G2 390 aa14.56□□□□□ -0.08
VPS72-204ENST00000471423 FOXRED1Q96CU9 486 aaPredicted RBP14.56□□□□□ -0.08
VPS72-204ENST00000471423 C1orf147Q96MC9 270 aaPredicted RBP14.56□□□□□ -0.08
VPS72-204ENST00000471423 GFI1Q99684 422 aa14.56□□□□□ -0.08
VPS72-204ENST00000471423 PCDHB16Q9NRJ7 776 aa14.56□□□□□ -0.08
VPS72-204ENST00000471423 ZNF581Q9P0T4 197 aa14.56□□□□□ -0.08
VPS72-204ENST00000471423 CENPVL3A0A0U1RRI6 287 aa14.55□□□□□ -0.08
VPS72-204ENST00000471423 GEMIN2O14893 280 aaKnown RBP14.55□□□□□ -0.08
VPS72-204ENST00000471423 GTF2F2P13984 249 aa14.55□□□□□ -0.08
VPS72-204ENST00000471423 CCL3L1P16619 93 aa14.55□□□□□ -0.08
VPS72-204ENST00000471423 BLMHQ13867 455 aa14.55□□□□□ -0.08
VPS72-204ENST00000471423 GPR176Q14439 515 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms