RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 A0A087WUJ7 227 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 A0A096LNT2 108 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 A0A0G2JMP0 313 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 A0A0X1KG70 313 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 SMCO3A2RU48 225 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 B4DXG7 233 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 C5orf58C9J3I9 102 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 E9PLD3 99 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.02□□□□□ -2.09
UBXN4-206ENST00000470687 CLDN34H7C241 214 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 H7C423 109 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 M0R1B8 84 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 M0R233 179 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 HMGN4O00479 90 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 NDUFAB1O14561 156 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 POLR3GO15318 223 aaPredicted RBP2.02□□□□□ -2.09
UBXN4-206ENST00000470687 RGS16O15492 202 aaPredicted RBP2.02□□□□□ -2.09
UBXN4-206ENST00000470687 H6PDO95479 791 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 STAMBPO95630 424 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 SNAP29O95721 258 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 SERPINA3P01011 423 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 IGF1P05019 195 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 SERPINA5P05154 406 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 OR4A8P0C604 315 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 CCDC159P0C7I6 412 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 OR12D1P0DN82 309 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 ZNF35P13682 527 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 GPX2P18283 190 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 SRP14P37108 136 aaKnown RBP2.02□□□□□ -2.09
UBXN4-206ENST00000470687 ZNF83P51522 516 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 ARHGDIBP52566 201 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 KRTAP10-1P60331 282 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 PCBD1P61457 104 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 RND3P61587 244 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 MRPS25P82663 173 aaKnown RBP2.02□□□□□ -2.09
UBXN4-206ENST00000470687 EWSR1Q01844 656 aaKnown RBP eCLIP2.02□□□□□ -2.09
UBXN4-206ENST00000470687 COX10Q12887 443 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 IL18R1Q13478 541 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 CHI3L2Q15782 390 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 TOMM34Q15785 309 aaPredicted RBP2.02□□□□□ -2.09
UBXN4-206ENST00000470687 KCTD19Q17RG1 926 aaPredicted RBP2.02□□□□□ -2.09
UBXN4-206ENST00000470687 GSG1Q2KHT4 349 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 SLC36A2Q495M3 483 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 TCTEX1D4Q5JR98 221 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 ZNF506Q5JVG8 444 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 CCNJQ5T5M9 372 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 TSPO2Q5TGU0 170 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 PRAMEF5Q5TYX0 476 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 C1orf140Q5VVS0 124 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 PRAMEF6Q5VXH4 476 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 PYHIN1Q6K0P9 492 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 REEP3Q6NUK4 255 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 CASP12Q6UXS9 341 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 C12orf54Q6X4T0 127 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 ZCCHC23Q6ZST2 131 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 RPS27LQ71UM5 84 aaKnown RBP2.02□□□□□ -2.09
UBXN4-206ENST00000470687 PHC2Q8IXK0 858 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 SLC35F2Q8IXU6 374 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 ZIC4Q8N9L1 334 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 GATSQ8NAP1 163 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 ATP6V1C2Q8NEY4 427 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 OR4M2Q8NGB6 313 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 OR9K2Q8NGE7 335 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 OR4D5Q8NGN0 318 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 OR52P1PQ8NH57 321 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 OR51F2Q8NH61 342 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 OR6X1Q8NH79 312 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 PIGCQ92535 297 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 RAB1CQ92928 201 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 POP5Q969H6 163 aaKnown RBP2.02□□□□□ -2.09
UBXN4-206ENST00000470687 AURKBQ96GD4 344 aaPredicted RBP2.02□□□□□ -2.09
UBXN4-206ENST00000470687 SLC25A44Q96H78 314 aaPredicted RBP2.02□□□□□ -2.09
UBXN4-206ENST00000470687 FOXN4Q96NZ1 517 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 OR5M11Q96RB7 305 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 CLCC1Q96S66 551 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 SUCNR1Q9BXA5 334 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 NDEL1Q9GZM8 345 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 SLITRK2Q9H156 845 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 PPDPFQ9H3Y8 114 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 NCOR1P1Q9H4R4 102 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 TMEM38AQ9H6F2 299 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 TMEM185BQ9H7F4 350 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 ISG20L2Q9H9L3 353 aaKnown RBP2.02□□□□□ -2.09
UBXN4-206ENST00000470687 TPT1P8Q9HAU6 139 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 DYNLRB1Q9NP97 96 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 CTPS2Q9NRF8 586 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 SLC7A10Q9NS82 523 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 SLC2A8Q9NY64 477 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 NKIRAS1Q9NYS0 192 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 DPM3Q9P2X0 92 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 RABL2AQ9UBK7 228 aaPredicted RBP2.02□□□□□ -2.09
UBXN4-206ENST00000470687 MLXQ9UH92 298 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 SLC7A8Q9UHI5 535 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 IKZF2Q9UKS7 526 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 PYCARDQ9ULZ3 195 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 SAMD4AQ9UPU9 718 aaKnown RBP2.02□□□□□ -2.09
UBXN4-206ENST00000470687 MOKQ9UQ07 419 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 POFUT2Q9Y2G5 429 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 FLNAP21333 2647 aaKnown RBP2.02□□□□□ -2.09
UBXN4-206ENST00000470687 PRR14LQ5THK1 2151 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms