RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 ZNF83P51522 516 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 IDH3GP51553 393 aaPredicted RBP3.09□□□□□ -1.91
COL9A1-206ENST00000470652 ARHGDIAP52565 204 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 SMSP52788 366 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 ESRRGP62508 458 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 ZNF85Q03923 595 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 MFGE8Q08431 387 aaPredicted RBP3.09□□□□□ -1.91
COL9A1-206ENST00000470652 GABRA6Q16445 453 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 HIST3H3Q16695 136 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 TP53I3Q53FA7 332 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 RIPPLY2Q5TAB7 128 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 OR2G6Q5TZ20 316 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 PET117Q6UWS5 81 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 AHSA2Q719I0 299 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 MDP1Q86V88 176 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 ERI1Q8IV48 349 aaKnown RBP3.09□□□□□ -1.91
COL9A1-206ENST00000470652 ZNF786Q8N393 782 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 GPR137CQ8N3F9 429 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 ZNF433Q8N7K0 673 aaPredicted RBP3.09□□□□□ -1.91
COL9A1-206ENST00000470652 SLC26A10Q8NG04 563 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 OR51G2Q8NGK0 314 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 OR52I1Q8NGK6 324 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 OR1K1Q8NGR3 316 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 OR1B1Q8NGR6 318 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 OR13C5Q8NGS8 318 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 OR6K3Q8NGY3 331 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 OR6N2Q8NGY6 317 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 OR6F1Q8NGZ6 308 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 C8orf46Q8TAG6 207 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 PCNPQ8WW12 178 aaKnown RBP3.09□□□□□ -1.91
COL9A1-206ENST00000470652 DNAJC9Q8WXX5 260 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 NRGNQ92686 78 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 GGHQ92820 318 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 BCL2L2Q92843 193 aaPredicted RBP3.09□□□□□ -1.91
COL9A1-206ENST00000470652 TMEM45BQ96B21 275 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 SLC25A44Q96H78 314 aaPredicted RBP3.09□□□□□ -1.91
COL9A1-206ENST00000470652 CYYR1Q96J86 154 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 WFIKKN1Q96NZ8 548 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 ZNF184Q99676 751 aaPredicted RBP3.09□□□□□ -1.91
COL9A1-206ENST00000470652 APOL4Q9BPW4 351 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 ZNF649Q9BS31 505 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 ATG101Q9BSB4 218 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 ALG12Q9BV10 488 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 ZNF416Q9BWM5 594 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 ISG20L2Q9H9L3 353 aaKnown RBP3.09□□□□□ -1.91
COL9A1-206ENST00000470652 PLEKHA3Q9HB20 300 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 ADGRL4Q9HBW9 690 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 FANCFQ9NPI8 374 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 TIGARQ9NQ88 270 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 POLE4Q9NR33 117 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 TMEM38BQ9NVV0 291 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 SLCO1C1Q9NYB5 712 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 ZNF319Q9P2F9 582 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 FZR1Q9UM11 496 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 SPATA2Q9UM82 520 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 N6AMT1Q9Y5N5 214 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 COMMD3-BMI1R4GMX3 469 aa3.09□□□□□ -1.91
COL9A1-206ENST00000470652 DOPEY1Q5JWR5 2465 aa3.09□□□□□ -1.92
COL9A1-206ENST00000470652 ASH1LQ9NR48 2969 aaKnown RBP3.09□□□□□ -1.92
COL9A1-206ENST00000470652 TRAV34A0A0B4J273 112 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 IGHV3-64DA0A0J9YX35 117 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 LOC102725191A0A1B0GVB3 256 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 A0A1W2PQL4 384 aaPredicted RBP3.08□□□□□ -1.92
COL9A1-206ENST00000470652 J3QRE1 110 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 M0R1B8 84 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 ZNF593O00488 134 aaPredicted RBP3.08□□□□□ -1.92
COL9A1-206ENST00000470652 XKRYO14609 159 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 CLN5O75503 358 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 RPP14O95059 124 aaKnown RBP3.08□□□□□ -1.92
COL9A1-206ENST00000470652 FADS2O95864 444 aaKnown RBP3.08□□□□□ -1.92
COL9A1-206ENST00000470652 PTHP01270 115 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 IGF2P01344 180 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 RPSAP08865 295 aaKnown RBP3.08□□□□□ -1.92
COL9A1-206ENST00000470652 MMP7P09237 267 aaPredicted RBP3.08□□□□□ -1.92
COL9A1-206ENST00000470652 CD79AP11912 226 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 GABRA1P14867 456 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 ZNF3P17036 446 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 COX5AP20674 150 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 LOXP28300 417 aaPredicted RBP3.08□□□□□ -1.92
COL9A1-206ENST00000470652 CALCRP30988 508 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 UGT2B10P36537 528 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 TGFBR1P36897 503 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 IER3P46695 156 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 GTF2A1P52655 376 aaPredicted RBP3.08□□□□□ -1.92
COL9A1-206ENST00000470652 SLC25A1P53007 311 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 PRPS1P60891 318 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 PSG4Q00888 419 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 GLO1Q04760 184 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 SCN1BQ07699 218 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 EIF2B1Q14232 305 aaKnown RBP3.08□□□□□ -1.92
COL9A1-206ENST00000470652 INSL4Q14641 139 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 PDK3Q15120 406 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 RSPO1Q2MKA7 263 aaPredicted RBP3.08□□□□□ -1.92
COL9A1-206ENST00000470652 ALKBH6Q3KRA9 238 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 CCDC92Q53HC0 331 aaPredicted RBP3.08□□□□□ -1.92
COL9A1-206ENST00000470652 SPRNQ5BIV9 151 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 PABPC1L2AQ5JQF8 200 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 ZNF506Q5JVG8 444 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 SPATA46Q5T0L3 261 aa3.08□□□□□ -1.92
COL9A1-206ENST00000470652 FBXW9Q5XUX1 488 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms