RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 SHARPINQ9H0F6 387 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 ATG5Q9H1Y0 275 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 DNAJB11Q9UBS4 358 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 EDARQ9UNE0 448 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 TACC2O95359 2948 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 CSMD2Q7Z408 3487 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 ITPR2Q14571 2701 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 IGHV4-30-2A0A087WSY4 118 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 SLC33A1O00400 549 aaPredicted RBP9.38□□□□□ -0.91
SREBF1-209ENST00000470247 SH2D1BO14796 132 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 DEGS1O15121 323 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 RGS5O15539 181 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 PSPNO60542 156 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 OR7C1O76099 320 aaPredicted RBP9.38□□□□□ -0.91
SREBF1-209ENST00000470247 HLA-DQB1P01920 261 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 SELLP14151 372 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 CPT2P23786 658 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 GABRR1P24046 479 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 BLVRBP30043 206 aaPredicted RBP9.38□□□□□ -0.91
SREBF1-209ENST00000470247 MDH2P40926 338 aaKnown RBP9.38□□□□□ -0.91
SREBF1-209ENST00000470247 GPR6P46095 362 aaPredicted RBP9.38□□□□□ -0.91
SREBF1-209ENST00000470247 PITPNBP48739 271 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 COL10A1Q03692 680 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 CARTPTQ16568 116 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 TMEM155Q4W5P6 130 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 CNIH2Q6PI25 160 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 BRICD5Q6PL45 260 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 C17orf107Q6ZR85 190 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 LINC00596Q86U02 117 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 CCDC190Q86UF4 302 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 OR4M1Q8NGD0 313 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 OR10R2Q8NGX6 335 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 RAB1CQ92928 201 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 CCL13Q99616 98 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 BPESC1Q9GZL8 116 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 KAAG1Q9UBP8 84 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 CTSZQ9UBR2 303 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 OR14J1Q9UGF5 321 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 PEX16Q9Y5Y5 336 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 MALRD1Q5VYJ5 2156 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 NOTCH2Q04721 2471 aa9.38□□□□□ -0.91
SREBF1-209ENST00000470247 FLNBO75369 2602 aaKnown RBP9.37□□□□□ -0.91
SREBF1-209ENST00000470247 A0A096LNT2 108 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 A0A0A6YYH2 397 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 METTL21EPA6NDL7 271 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 A6NJ64 397 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 CEACAM18A8MTB9 384 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 NDUFS8O00217 210 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 SIRPB1O00241 398 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 SIGLEC5O15389 551 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 XRCC3O43542 346 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 PDCD6O75340 191 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 WNT2P09544 360 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 CSF3P09919 207 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 FUT3P21217 361 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 GABRA2P47869 451 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 SCN1BQ07699 218 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 IKZF1Q13422 519 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 ZNF260Q3ZCT1 412 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 FIP1L1Q6UN15 594 aaKnown RBP9.37□□□□□ -0.91
SREBF1-209ENST00000470247 PRSS57Q6UWY2 283 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 ZNF841Q6ZN19 808 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 DCDC5Q6ZRR9 648 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 C6orf201Q7Z4U5 140 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 PEG10Q86TG7 708 aaKnown RBP9.37□□□□□ -0.91
SREBF1-209ENST00000470247 IZUMO1Q8IYV9 350 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 FGFRL1Q8N441 504 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 SUMF2Q8NBJ7 301 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 ZNRF1Q8ND25 227 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 OR4S1Q8NGB4 309 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 OR56B1Q8NGI3 324 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 FAM168AQ92567 244 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 S100A16Q96FQ6 103 aaKnown RBP9.37□□□□□ -0.91
SREBF1-209ENST00000470247 TIMD4Q96H15 378 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 ARHGAP5-AS1Q96IT6 56 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 SULT4A1Q9BR01 284 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 NUDT16L1Q9BRJ7 211 aaKnown RBP9.37□□□□□ -0.91
SREBF1-209ENST00000470247 PECRQ9BY49 303 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 DNTTIP1Q9H147 329 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 ZNF665Q9H7R5 613 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 EXTL2Q9UBQ6 330 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 ELF5Q9UKW6 265 aaPredicted RBP9.37□□□□□ -0.91
SREBF1-209ENST00000470247 HSF4Q9ULV5 492 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 PDZD2O15018 2839 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 ANKRD17O75179 2603 aaKnown RBP9.37□□□□□ -0.91
SREBF1-209ENST00000470247 CCDC168Q8NDH2 2452 aa9.37□□□□□ -0.91
SREBF1-209ENST00000470247 TRAV18A0A075B6X5 111 aa9.36□□□□□ -0.91
SREBF1-209ENST00000470247 FAM25AB3EWG3 89 aa9.36□□□□□ -0.91
SREBF1-209ENST00000470247 FAM25CB3EWG5 89 aa9.36□□□□□ -0.91
SREBF1-209ENST00000470247 FAM25GB3EWG6 89 aa9.36□□□□□ -0.91
SREBF1-209ENST00000470247 F5H0A9 414 aaPredicted RBP9.36□□□□□ -0.91
SREBF1-209ENST00000470247 K7N7A8 449 aa9.36□□□□□ -0.91
SREBF1-209ENST00000470247 MFNGO00587 321 aa9.36□□□□□ -0.91
SREBF1-209ENST00000470247 NDUFA2O43678 99 aa9.36□□□□□ -0.91
SREBF1-209ENST00000470247 MELTFP08582 738 aa9.36□□□□□ -0.91
SREBF1-209ENST00000470247 PTHLHP12272 177 aa9.36□□□□□ -0.91
SREBF1-209ENST00000470247 ZNF44P15621 663 aa9.36□□□□□ -0.91
SREBF1-209ENST00000470247 HIST1H1DP16402 221 aaKnown RBP9.36□□□□□ -0.91
SREBF1-209ENST00000470247 ETV6P41212 452 aa9.36□□□□□ -0.91
SREBF1-209ENST00000470247 MNDAP41218 407 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms