RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 IGHV3-13P01766 116 aa11.4□□□□□ -0.58
LINC00173-201ENST00000470091 HLA-DQB1P01920 261 aa11.4□□□□□ -0.58
LINC00173-201ENST00000470091 VEGFCP49767 419 aa11.4□□□□□ -0.58
LINC00173-201ENST00000470091 RPS27AP62979 156 aaKnown RBP11.4□□□□□ -0.58
LINC00173-201ENST00000470091 ACTG1P63261 375 aa11.4□□□□□ -0.58
LINC00173-201ENST00000470091 PCGF3Q3KNV8 242 aa11.4□□□□□ -0.58
LINC00173-201ENST00000470091 TRIQKQ629K1 86 aa11.4□□□□□ -0.58
LINC00173-201ENST00000470091 HAGHLQ6PII5 290 aaPredicted RBP11.4□□□□□ -0.58
LINC00173-201ENST00000470091 ZNF573Q86YE8 665 aa11.4□□□□□ -0.58
LINC00173-201ENST00000470091 ZSCAN4Q8NAM6 433 aaPredicted RBP11.4□□□□□ -0.58
LINC00173-201ENST00000470091 CCL17Q92583 94 aa11.4□□□□□ -0.58
LINC00173-201ENST00000470091 SELENOIQ9C0D9 397 aa11.4□□□□□ -0.58
LINC00173-201ENST00000470091 OR51I2Q9H344 312 aa11.4□□□□□ -0.58
LINC00173-201ENST00000470091 IL36GQ9NZH8 169 aa11.4□□□□□ -0.58
LINC00173-201ENST00000470091 RABL2AQ9UBK7 228 aaPredicted RBP11.4□□□□□ -0.58
LINC00173-201ENST00000470091 RABL2BQ9UNT1 228 aa11.4□□□□□ -0.58
LINC00173-201ENST00000470091 PKD1L1Q8TDX9 2849 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 A0A0A6YYH2 397 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 A0A0A6YYJ9 748 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 IGHV3-64DA0A0J9YX35 117 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 LINC00854A0A1B0GVQ3 168 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 A6NJ64 397 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 F5H5P2 479 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 J3QT63 122 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 RAB27BO00194 218 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 CTDSPLO15194 276 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 LANCL1O43813 399 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 SFTPBP07988 381 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 BCL3P20749 454 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 ZNF81P51508 661 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 PEG10Q86TG7 708 aaKnown RBP11.39□□□□□ -0.59
LINC00173-201ENST00000470091 SAXO1Q8IYX7 474 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 CHST4Q8NCG5 386 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 OR51T1Q8NGJ9 327 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 OR13G1Q8NGZ3 307 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 OR52I2Q8NH67 350 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 SMIM4Q8WVI0 70 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 TRIM63Q969Q1 353 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 Q96M66 194 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 URM1Q9BTM9 101 aaKnown RBP11.39□□□□□ -0.59
LINC00173-201ENST00000470091 PKIBQ9C010 78 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 SLC22A4Q9H015 551 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 PCDHB10Q9UN67 800 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 WIPI2Q9Y4P8 454 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 MGAM2Q2M2H8 2515 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 ARHGAP32A7KAX9 2087 aa11.39□□□□□ -0.59
LINC00173-201ENST00000470091 A0A1B0GWJ7 208 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 TMEM210A6NLX4 147 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 SOCS1O15524 211 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 GSTZ1O43708 216 aaPredicted RBP11.38□□□□□ -0.59
LINC00173-201ENST00000470091 SCGNO76038 276 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 CSTBP04080 98 aaKnown RBP11.38□□□□□ -0.59
LINC00173-201ENST00000470091 GRPP07492 148 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 CD3GP09693 182 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 EPHA1P21709 976 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 NPBWR2P48146 333 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 GUCA2AQ02747 115 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 ZNF154Q13106 437 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 SCGB2A2Q13296 93 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 GPR176Q14439 515 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 HFEQ30201 348 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 PIGYQ3MUY2 71 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 PRAMEF6Q5VXH4 476 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 RAB12Q6IQ22 244 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 MKXQ8IYA7 352 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 C3orf56Q8N813 242 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 OR2Z1Q8NG97 314 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 OR10R2Q8NGX6 335 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 RAB1CQ92928 201 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 CYYR1Q96J86 154 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 ZNF488Q96MN9 340 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 TM2D1Q9BX74 207 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 ZMAT3Q9HA38 289 aaKnown RBP11.38□□□□□ -0.59
LINC00173-201ENST00000470091 SAP30LQ9HAJ7 183 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 RBFOX1Q9NWB1 397 aaKnown RBP11.38□□□□□ -0.59
LINC00173-201ENST00000470091 NKIRAS2Q9NYR9 191 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 MTCH1Q9NZJ7 389 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 TBC1D24Q9ULP9 559 aa11.38□□□□□ -0.59
LINC00173-201ENST00000470091 PLSCR5A0PG75 271 aa11.37□□□□□ -0.59
LINC00173-201ENST00000470091 MEIOCA2RUB1 952 aa11.37□□□□□ -0.59
LINC00173-201ENST00000470091 ISPDA4D126 451 aa11.37□□□□□ -0.59
LINC00173-201ENST00000470091 TMEM235A6NFC5 223 aa11.37□□□□□ -0.59
LINC00173-201ENST00000470091 F8VVB4 439 aa11.37□□□□□ -0.59
LINC00173-201ENST00000470091 F8VWA3 439 aa11.37□□□□□ -0.59
LINC00173-201ENST00000470091 TRAPPC2LH3BP13 241 aa11.37□□□□□ -0.59
LINC00173-201ENST00000470091 GABARAPH6UMI1 98 aa11.37□□□□□ -0.59
LINC00173-201ENST00000470091 ZNF780AO75290 641 aaPredicted RBP11.37□□□□□ -0.59
LINC00173-201ENST00000470091 RHBDL1O75783 438 aa11.37□□□□□ -0.59
LINC00173-201ENST00000470091 TPPPO94811 219 aa11.37□□□□□ -0.59
LINC00173-201ENST00000470091 CYB5AP00167 134 aa11.37□□□□□ -0.59
LINC00173-201ENST00000470091 GTF2F2P13984 249 aa11.37□□□□□ -0.59
LINC00173-201ENST00000470091 CPT2P23786 658 aa11.37□□□□□ -0.59
LINC00173-201ENST00000470091 GABRR1P24046 479 aa11.37□□□□□ -0.59
LINC00173-201ENST00000470091 MPZP25189 248 aa11.37□□□□□ -0.59
LINC00173-201ENST00000470091 RBMXP38159 391 aaKnown RBP11.37□□□□□ -0.59
LINC00173-201ENST00000470091 SNU13P55769 128 aaKnown RBP11.37□□□□□ -0.59
LINC00173-201ENST00000470091 MRPS10P82664 201 aaKnown RBP11.37□□□□□ -0.59
LINC00173-201ENST00000470091 IL24Q13007 206 aa11.37□□□□□ -0.59
LINC00173-201ENST00000470091 RGS21Q2M5E4 152 aa11.37□□□□□ -0.59
LINC00173-201ENST00000470091 DCAF12L2Q5VW00 463 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms