RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 GPR31O00270 319 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 HSPB6O14558 160 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 LRP3O75074 770 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 DIRAS3O95661 229 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 MT-CO3P00414 261 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 RPL12P30050 165 aaKnown RBP12.62□□□□□ -0.39
CBWD3-205ENST00000469687 MEOX1P50221 254 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 MOB3AQ96BX8 217 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 ADAT1Q9BUB4 502 aaKnown RBP12.62□□□□□ -0.39
CBWD3-205ENST00000469687 ZNF552Q9H707 407 aaPredicted RBP12.62□□□□□ -0.39
CBWD3-205ENST00000469687 PLA2G2EQ9NZK7 142 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 STARD10Q9Y365 291 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 TMEM218A2RU14 115 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 K7EPK0 472 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 LILRA1O75019 489 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 IFNA21P01568 189 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 MBPP02686 304 aaPredicted RBP12.62□□□□□ -0.39
CBWD3-205ENST00000469687 RAB1AP62820 205 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 IGFBP7Q16270 282 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 PLA2G2CQ5R387 149 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 FAM71E2Q8N5Q1 922 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 OR5T2Q8NGG2 359 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 GLYATL2Q8WU03 294 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 ERGIC1Q969X5 290 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 PRRX2Q99811 253 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 OR51B6Q9H340 312 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 TAF9BQ9HBM6 251 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 LPAR3Q9UBY5 353 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 FBXL17Q9UF56 701 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 PRSS50Q9UI38 385 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 AMDHD2Q9Y303 409 aa12.62□□□□□ -0.39
CBWD3-205ENST00000469687 FBXO24O75426 580 aa12.61□□□□□ -0.39
CBWD3-205ENST00000469687 DUSP1P28562 367 aa12.61□□□□□ -0.39
CBWD3-205ENST00000469687 GUCA2BQ16661 112 aa12.61□□□□□ -0.39
CBWD3-205ENST00000469687 MRPL21Q7Z2W9 205 aaKnown RBP12.61□□□□□ -0.39
CBWD3-205ENST00000469687 CCDC36Q8IYA8 594 aa12.61□□□□□ -0.39
CBWD3-205ENST00000469687 OR52M1Q8NGK5 317 aa12.61□□□□□ -0.39
CBWD3-205ENST00000469687 EXTL1Q92935 676 aa12.61□□□□□ -0.39
CBWD3-205ENST00000469687 APH1AQ96BI3 265 aa12.61□□□□□ -0.39
CBWD3-205ENST00000469687 MSI2Q96DH6 328 aaKnown RBP12.61□□□□□ -0.39
CBWD3-205ENST00000469687 GALNT14Q96FL9 552 aa12.61□□□□□ -0.39
CBWD3-205ENST00000469687 TECTBQ96PL2 329 aa12.61□□□□□ -0.39
CBWD3-205ENST00000469687 GPHA2Q96T91 129 aa12.61□□□□□ -0.39
CBWD3-205ENST00000469687 HRH4Q9H3N8 390 aa12.61□□□□□ -0.39
CBWD3-205ENST00000469687 C12orf49Q9H741 205 aa12.61□□□□□ -0.39
CBWD3-205ENST00000469687 MTCH1Q9NZJ7 389 aa12.61□□□□□ -0.39
CBWD3-205ENST00000469687 ABI3Q9P2A4 366 aa12.61□□□□□ -0.39
CBWD3-205ENST00000469687 KCNIP3Q9Y2W7 256 aa12.61□□□□□ -0.39
CBWD3-205ENST00000469687 R4GN57 208 aa12.61□□□□□ -0.39
CBWD3-205ENST00000469687 ZNF732B4DXR9 585 aa12.6□□□□□ -0.39
CBWD3-205ENST00000469687 TNFSF15O95150 251 aa12.6□□□□□ -0.39
CBWD3-205ENST00000469687 NME2P22392 152 aa12.6□□□□□ -0.39
CBWD3-205ENST00000469687 TMEM33P57088 247 aa12.6□□□□□ -0.39
CBWD3-205ENST00000469687 TMEM211Q6ICI0 200 aa12.6□□□□□ -0.39
CBWD3-205ENST00000469687 UQCC3Q6UW78 93 aa12.6□□□□□ -0.39
CBWD3-205ENST00000469687 VASH2Q86V25 355 aa12.6□□□□□ -0.39
CBWD3-205ENST00000469687 ARL11Q969Q4 196 aa12.6□□□□□ -0.39
CBWD3-205ENST00000469687 TP53RKQ96S44 253 aa12.6□□□□□ -0.39
CBWD3-205ENST00000469687 NKX6-2Q9C056 277 aaPredicted RBP12.6□□□□□ -0.39
CBWD3-205ENST00000469687 ATPIF1Q9UII2 106 aa12.6□□□□□ -0.39
CBWD3-205ENST00000469687 SYNGR1O43759 233 aa12.6□□□□□ -0.39
CBWD3-205ENST00000469687 ATG12O94817 140 aa12.6□□□□□ -0.39
CBWD3-205ENST00000469687 F12P00748 615 aaPredicted RBP12.6□□□□□ -0.39
CBWD3-205ENST00000469687 SP1P08047 785 aa12.6□□□□□ -0.39
CBWD3-205ENST00000469687 ID4P47928 161 aa12.6□□□□□ -0.39
CBWD3-205ENST00000469687 HIKESHIQ53FT3 197 aa12.6□□□□□ -0.39
CBWD3-205ENST00000469687 HES3Q5TGS1 186 aa12.6□□□□□ -0.39
CBWD3-205ENST00000469687 ZDHHC23Q8IYP9 409 aa12.6□□□□□ -0.39
CBWD3-205ENST00000469687 C18orf12Q96KH6 178 aa12.6□□□□□ -0.39
CBWD3-205ENST00000469687 POM121L2Q96KW2 1035 aa12.6□□□□□ -0.39
CBWD3-205ENST00000469687 ZNF488Q96MN9 340 aa12.6□□□□□ -0.39
CBWD3-205ENST00000469687 FAM96BQ9Y3D0 163 aa12.6□□□□□ -0.39
CBWD3-205ENST00000469687 CDK2AP1O14519 115 aa12.59□□□□□ -0.39
CBWD3-205ENST00000469687 PHF1O43189 567 aaPredicted RBP12.59□□□□□ -0.39
CBWD3-205ENST00000469687 SS18L1O75177 396 aaPredicted RBP12.59□□□□□ -0.39
CBWD3-205ENST00000469687 PPYP01298 95 aa12.59□□□□□ -0.39
CBWD3-205ENST00000469687 SCTP09683 121 aa12.59□□□□□ -0.39
CBWD3-205ENST00000469687 LPAR6P43657 344 aa12.59□□□□□ -0.39
CBWD3-205ENST00000469687 SMCO1Q147U7 214 aa12.59□□□□□ -0.39
CBWD3-205ENST00000469687 TSC22D1Q15714 1073 aa12.59□□□□□ -0.39
CBWD3-205ENST00000469687 TMEM268Q5VZI3 342 aa12.59□□□□□ -0.39
CBWD3-205ENST00000469687 MEX3BQ6ZN04 569 aaKnown RBP12.59□□□□□ -0.39
CBWD3-205ENST00000469687 LIAT1Q6ZQX7 453 aa12.59□□□□□ -0.39
CBWD3-205ENST00000469687 PUSL1Q8N0Z8 303 aaKnown RBP12.59□□□□□ -0.39
CBWD3-205ENST00000469687 Q8NFD4 153 aa12.59□□□□□ -0.39
CBWD3-205ENST00000469687 APOBEC3DQ96AK3 386 aaPredicted RBP12.59□□□□□ -0.39
CBWD3-205ENST00000469687 DEFB127Q9H1M4 99 aa12.59□□□□□ -0.39
CBWD3-205ENST00000469687 MMP26Q9NRE1 261 aa12.59□□□□□ -0.39
CBWD3-205ENST00000469687 ZNF724A8MTY0 619 aa12.59□□□□□ -0.39
CBWD3-205ENST00000469687 WNT5AP41221 380 aa12.59□□□□□ -0.39
CBWD3-205ENST00000469687 GLP1RP43220 463 aa12.59□□□□□ -0.39
CBWD3-205ENST00000469687 FGF12P61328 243 aa12.59□□□□□ -0.39
CBWD3-205ENST00000469687 HERV-K104P61576 105 aa12.59□□□□□ -0.39
CBWD3-205ENST00000469687 CEACAM21Q3KPI0 293 aa12.59□□□□□ -0.39
CBWD3-205ENST00000469687 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.59□□□□□ -0.39
CBWD3-205ENST00000469687 MDS2Q8NDY4 140 aa12.59□□□□□ -0.39
CBWD3-205ENST00000469687 SMIM8Q96KF7 97 aa12.59□□□□□ -0.39
CBWD3-205ENST00000469687 TSNAXQ99598 290 aaKnown RBP12.59□□□□□ -0.39
CBWD3-205ENST00000469687 RSRP1Q9BUV0 290 aa12.59□□□□□ -0.39
CBWD3-205ENST00000469687 PCDHB16Q9NRJ7 776 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms