RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 SERPINA3P01011 423 aa9.75□□□□□ -0.85
HDAC3-204ENST00000469207 IGLV1-47P01700 117 aa9.75□□□□□ -0.85
HDAC3-204ENST00000469207 IGHV3-7P01780 117 aa9.75□□□□□ -0.85
HDAC3-204ENST00000469207 CCDC159P0C7I6 412 aa9.75□□□□□ -0.85
HDAC3-204ENST00000469207 AZGP1P25311 298 aaKnown RBP9.75□□□□□ -0.85
HDAC3-204ENST00000469207 RBP2P50120 134 aa9.75□□□□□ -0.85
HDAC3-204ENST00000469207 ATP1B3P54709 279 aa9.75□□□□□ -0.85
HDAC3-204ENST00000469207 MTCP1P56278 107 aa9.75□□□□□ -0.85
HDAC3-204ENST00000469207 P2RX3P56373 397 aa9.75□□□□□ -0.85
HDAC3-204ENST00000469207 SLC35A2P78381 396 aa9.75□□□□□ -0.85
HDAC3-204ENST00000469207 BDH1Q02338 343 aa9.75□□□□□ -0.85
HDAC3-204ENST00000469207 ZNF146Q15072 292 aa9.75□□□□□ -0.85
HDAC3-204ENST00000469207 OR10H4Q8NGA5 316 aa9.75□□□□□ -0.85
HDAC3-204ENST00000469207 FGGYQ96C11 551 aa9.75□□□□□ -0.85
HDAC3-204ENST00000469207 SLC7A6OSQ96CW6 309 aaPredicted RBP9.75□□□□□ -0.85
HDAC3-204ENST00000469207 RBM14Q96PK6 669 aaKnown RBP9.75□□□□□ -0.85
HDAC3-204ENST00000469207 LIN7BQ9HAP6 207 aa9.75□□□□□ -0.85
HDAC3-204ENST00000469207 HMG20AQ9NP66 347 aa9.75□□□□□ -0.85
HDAC3-204ENST00000469207 LINC00527Q9UJ94 153 aa9.75□□□□□ -0.85
HDAC3-204ENST00000469207 UBE2J1Q9Y385 318 aaPredicted RBP9.75□□□□□ -0.85
HDAC3-204ENST00000469207 TRBV2A0A0J9YWF9 115 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 LEUTXA8MZ59 168 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 G3V2T6 193 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 LY6LH3BQJ8 138 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 BUB1B-PAK6H3BSN5 160 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 GYG2O15488 501 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 GATBO75879 557 aaKnown RBP9.74□□□□□ -0.85
HDAC3-204ENST00000469207 OR2F2O95006 317 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 FAM107AO95990 144 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 ALDOBP05062 364 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 OR2T7P0C7T2 308 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 ATF1P18846 271 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 ERP29P30040 261 aaKnown RBP9.74□□□□□ -0.85
HDAC3-204ENST00000469207 BRS3P32247 399 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 OR3A4PP47883 348 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 NANOS3P60323 173 aaKnown RBP9.74□□□□□ -0.85
HDAC3-204ENST00000469207 ZNF85Q03923 595 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 PDZK1IP1Q13113 114 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 IL18R1Q13478 541 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 RBM39Q14498 530 aaKnown RBP9.74□□□□□ -0.85
HDAC3-204ENST00000469207 KPNB1Q14974 876 aaKnown RBP9.74□□□□□ -0.85
HDAC3-204ENST00000469207 C17orf58Q2M2W7 97 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 KDM4DQ6B0I6 523 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 HEPN1Q6WQI6 88 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 ETV3LQ6ZN32 361 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 ZBTB49Q6ZSB9 765 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 AMIGO2Q86SJ2 522 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 MRPL41Q8IXM3 137 aaKnown RBP9.74□□□□□ -0.85
HDAC3-204ENST00000469207 LINC00482Q8N8I6 264 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 OR5D18Q8NGL1 313 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 OR10AC1Q8NH08 325 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 CAPSLQ8WWF8 208 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 DNAJC9Q8WXX5 260 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 RCC1LQ96I51 464 aaKnown RBP9.74□□□□□ -0.85
HDAC3-204ENST00000469207 NOL4LQ96MY1 436 aaPredicted RBP9.74□□□□□ -0.85
HDAC3-204ENST00000469207 SEBOXQ9HB31 216 aaPredicted RBP9.74□□□□□ -0.85
HDAC3-204ENST00000469207 FRRS1LQ9P0K9 344 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 WARS2Q9UGM6 360 aaKnown RBP9.74□□□□□ -0.85
HDAC3-204ENST00000469207 GNG8Q9UK08 70 aa9.74□□□□□ -0.85
HDAC3-204ENST00000469207 TRGV10A0A0A0MS01 117 aa9.73□□□□□ -0.85
HDAC3-204ENST00000469207 H3BUI4 141 aa9.73□□□□□ -0.85
HDAC3-204ENST00000469207 SH2D1BO14796 132 aa9.73□□□□□ -0.85
HDAC3-204ENST00000469207 HTR1FP30939 366 aa9.73□□□□□ -0.85
HDAC3-204ENST00000469207 EGFEM1PQ0D2K5 195 aa9.73□□□□□ -0.85
HDAC3-204ENST00000469207 DIAPH2-AS1Q14236 149 aa9.73□□□□□ -0.85
HDAC3-204ENST00000469207 HLA-DRB5Q30154 266 aa9.73□□□□□ -0.85
HDAC3-204ENST00000469207 TPTE2P1Q5T6R2 138 aa9.73□□□□□ -0.85
HDAC3-204ENST00000469207 Q6P435 159 aa9.73□□□□□ -0.85
HDAC3-204ENST00000469207 GID4Q8IVV7 300 aa9.73□□□□□ -0.85
HDAC3-204ENST00000469207 ENTHD1Q8IYW4 607 aa9.73□□□□□ -0.85
HDAC3-204ENST00000469207 OR4X2Q8NGF9 303 aa9.73□□□□□ -0.85
HDAC3-204ENST00000469207 OR51A4Q8NGJ6 313 aa9.73□□□□□ -0.85
HDAC3-204ENST00000469207 ZNF596Q8TC21 504 aa9.73□□□□□ -0.85
HDAC3-204ENST00000469207 CORO2AQ92828 525 aa9.73□□□□□ -0.85
HDAC3-204ENST00000469207 LEAP2Q969E1 77 aa9.73□□□□□ -0.85
HDAC3-204ENST00000469207 EME1Q96AY2 570 aa9.73□□□□□ -0.85
HDAC3-204ENST00000469207 RBMXL1Q96E39 390 aaKnown RBP9.73□□□□□ -0.85
HDAC3-204ENST00000469207 COQ2Q96H96 371 aa9.73□□□□□ -0.85
HDAC3-204ENST00000469207 ZNF649Q9BS31 505 aa9.73□□□□□ -0.85
HDAC3-204ENST00000469207 PRRG3Q9BZD7 231 aa9.73□□□□□ -0.85
HDAC3-204ENST00000469207 PPIL3Q9H2H8 161 aaKnown RBP9.73□□□□□ -0.85
HDAC3-204ENST00000469207 EXOSC4Q9NPD3 245 aaKnown RBP9.73□□□□□ -0.85
HDAC3-204ENST00000469207 LINC01548A6NM66 108 aa9.72□□□□□ -0.85
HDAC3-204ENST00000469207 TOR1AO14656 332 aa9.72□□□□□ -0.85
HDAC3-204ENST00000469207 SULT1C4O75897 302 aa9.72□□□□□ -0.85
HDAC3-204ENST00000469207 CYB5AP00167 134 aa9.72□□□□□ -0.85
HDAC3-204ENST00000469207 SNRNP70P08621 437 aaKnown RBP9.72□□□□□ -0.85
HDAC3-204ENST00000469207 ZNF44P15621 663 aa9.72□□□□□ -0.85
HDAC3-204ENST00000469207 NFYBP25208 207 aa9.72□□□□□ -0.85
HDAC3-204ENST00000469207 LMO1P25800 156 aa9.72□□□□□ -0.85
HDAC3-204ENST00000469207 ATP6V1E1P36543 226 aa9.72□□□□□ -0.85
HDAC3-204ENST00000469207 ISL1P61371 349 aa9.72□□□□□ -0.85
HDAC3-204ENST00000469207 HNF4GQ14541 408 aa9.72□□□□□ -0.85
HDAC3-204ENST00000469207 ATXN7L3Q14CW9 347 aaPredicted RBP9.72□□□□□ -0.85
HDAC3-204ENST00000469207 KRBOX4Q5JUW0 171 aa9.72□□□□□ -0.85
HDAC3-204ENST00000469207 SPIN3Q5JUX0 258 aa9.72□□□□□ -0.85
HDAC3-204ENST00000469207 OR52W1Q6IF63 320 aa9.72□□□□□ -0.85
HDAC3-204ENST00000469207 C16orf82Q7Z2V1 217 aa9.72□□□□□ -0.85
HDAC3-204ENST00000469207 RTN4RL2Q86UN3 420 aa9.72□□□□□ -0.85
HDAC3-204ENST00000469207 Q8IYB0 196 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms