RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 GUCA1BQ9UMX6 200 aa2.47□□□□□ -2.01
XRN1-207ENST00000468894 NDUFAF1Q9Y375 327 aa2.47□□□□□ -2.01
XRN1-207ENST00000468894 FAM32AQ9Y421 112 aaKnown RBP2.47□□□□□ -2.01
XRN1-207ENST00000468894 V9GYY9 64 aa2.47□□□□□ -2.01
XRN1-207ENST00000468894 CNTLNQ9NXG0 1405 aa2.47□□□□□ -2.01
XRN1-207ENST00000468894 PCF11O94913 1555 aaKnown RBP2.47□□□□□ -2.01
XRN1-207ENST00000468894 DOCK3Q8IZD9 2030 aa2.47□□□□□ -2.01
XRN1-207ENST00000468894 SDK2Q58EX2 2172 aa2.47□□□□□ -2.01
XRN1-207ENST00000468894 EIF3AQ14152 1382 aaKnown RBP2.47□□□□□ -2.01
XRN1-207ENST00000468894 KIF24Q5T7B8 1368 aa2.47□□□□□ -2.01
XRN1-207ENST00000468894 KDM5BQ9UGL1 1544 aa2.47□□□□□ -2.01
XRN1-207ENST00000468894 COL5A1P20908 1838 aaPredicted RBP2.47□□□□□ -2.01
XRN1-207ENST00000468894 SEC16AO15027 2179 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.46□□□□□ -2.02
XRN1-207ENST00000468894 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.46□□□□□ -2.02
XRN1-207ENST00000468894 TVP23AA6NH52 213 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 SLC22A20A6NK97 555 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 SYCE1LA8MT33 242 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 F5H5T6 163 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 J3QLI3 93 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 M0QZ92 97 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 SULT1C2O00338 296 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 PRMT5O14744 637 aaPredicted RBP2.46□□□□□ -2.02
XRN1-207ENST00000468894 AZIN1O14977 448 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 CHST10O43529 356 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 SMIM24O75264 130 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 FKBP6O75344 327 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 SNAP29O95721 258 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 IGLV3-25P01717 112 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 CDK1P06493 297 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 NBEAP1P0C6P0 100 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 ERGP11308 486 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 IVDP26440 423 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 MAGEA3P43357 314 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 CLDN12P56749 244 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 MEF2BQ02080 365 aaPredicted RBP2.46□□□□□ -2.02
XRN1-207ENST00000468894 FLOT2Q14254 428 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 TCEAL5Q5H9L2 206 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 UBE2UQ5VVX9 321 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 C5orf46Q6UWT4 87 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 SSX6Q7RTT6 188 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 OR2W3Q7Z3T1 314 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 NPWQ8N729 165 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 TMEM105Q8N8V8 129 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 C12orf29Q8N999 325 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 OR11L1Q8NGX0 322 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 OR6K2Q8NGY2 324 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 PIGXQ8TBF5 258 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 IFT81Q8WYA0 676 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 RORBQ92753 470 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 TCEAL3Q969E4 200 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 BORCS5Q969J3 196 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 PPWD1Q96BP3 646 aaKnown RBP2.46□□□□□ -2.02
XRN1-207ENST00000468894 ZSCAN16Q9H4T2 348 aaPredicted RBP2.46□□□□□ -2.02
XRN1-207ENST00000468894 RETNQ9HD89 108 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 MYOZ1Q9NP98 299 aaPredicted RBP2.46□□□□□ -2.02
XRN1-207ENST00000468894 C1orf109Q9NX04 203 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 RWDD2AQ9UIY3 292 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 WNK3Q9BYP7 1800 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 PALLDQ8WX93 1383 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 RAB3GAP2Q9H2M9 1393 aa2.46□□□□□ -2.02
XRN1-207ENST00000468894 ZBED9Q6R2W3 1325 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 ADGRA3Q8IWK6 1321 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 NRCAMQ92823 1304 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 IGHV3OR16-8A0A075B7F1 116 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 UQCRHLA0A096LP55 91 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 A0A1B0GV90 55 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 C9J4A7 227 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 F5H768 121 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 KPNA3O00505 521 aaPredicted RBP2.45□□□□□ -2.02
XRN1-207ENST00000468894 ACOX3O15254 700 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 SLC31A1O15431 190 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 FGF16O43320 207 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 SLC22A5O76082 557 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 UQCRHP07919 91 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 KCNE1P15382 129 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 NQO1P15559 274 aaKnown RBP2.45□□□□□ -2.02
XRN1-207ENST00000468894 GPR1P46091 355 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 SLCO1A2P46721 670 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 CDK9P50750 372 aaKnown RBP2.45□□□□□ -2.02
XRN1-207ENST00000468894 CRYBA4P53673 196 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 OR10A3P58181 314 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 VSX2P58304 361 aaPredicted RBP2.45□□□□□ -2.02
XRN1-207ENST00000468894 AP1S1P61966 158 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 FAM3AP98173 230 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 MLLT11Q13015 90 aaPredicted RBP2.45□□□□□ -2.02
XRN1-207ENST00000468894 SKP2Q13309 424 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 PGGHGQ32M88 737 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 ACSM3Q53FZ2 586 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 RBM48Q5RL73 367 aaKnown RBP2.45□□□□□ -2.02
XRN1-207ENST00000468894 TPRG1LQ5T0D9 272 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 SDHAF4Q5VUM1 108 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 FAHD1Q6P587 224 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 DNM1P34Q6PK57 102 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 C4orf22Q6V702 233 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 DHFR2Q86XF0 187 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 PHF13Q86YI8 300 aaPredicted RBP2.45□□□□□ -2.02
XRN1-207ENST00000468894 BBS7Q8IWZ6 715 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 C11orf72Q8NBR9 251 aa2.45□□□□□ -2.02
XRN1-207ENST00000468894 TMEM35BQ8NCS4 154 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms