RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 EXOSC7Q15024 291 aaKnown RBP8.09□□□□□ -1.11
LCA5-203ENST00000467898 TMEM128Q5BJH2 165 aa8.09□□□□□ -1.11
LCA5-203ENST00000467898 LY6G5CQ5SRR4 150 aa8.09□□□□□ -1.11
LCA5-203ENST00000467898 ZNF776Q68DI1 518 aaPredicted RBP8.09□□□□□ -1.11
LCA5-203ENST00000467898 INO80CQ6PI98 192 aaPredicted RBP8.09□□□□□ -1.11
LCA5-203ENST00000467898 LRP11Q86VZ4 500 aa8.09□□□□□ -1.11
LCA5-203ENST00000467898 FAM219AQ8IW50 185 aa8.09□□□□□ -1.11
LCA5-203ENST00000467898 ZNF433Q8N7K0 673 aaPredicted RBP8.09□□□□□ -1.11
LCA5-203ENST00000467898 OR4N2Q8NGD1 307 aa8.09□□□□□ -1.11
LCA5-203ENST00000467898 OR13C9Q8NGT0 318 aa8.09□□□□□ -1.11
LCA5-203ENST00000467898 TMEM37Q8WXS4 190 aa8.09□□□□□ -1.11
LCA5-203ENST00000467898 HARBI1Q96MB7 349 aa8.09□□□□□ -1.11
LCA5-203ENST00000467898 PHF7Q9BWX1 381 aaPredicted RBP8.09□□□□□ -1.11
LCA5-203ENST00000467898 LINC00470Q9BZP3 86 aa8.09□□□□□ -1.11
LCA5-203ENST00000467898 KIAA1549LQ6ZVL6 1849 aa8.09□□□□□ -1.11
LCA5-203ENST00000467898 C2orf16Q68DN1 1984 aa8.09□□□□□ -1.12
LCA5-203ENST00000467898 A0A1W2PPK0 400 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 AESQ08117 197 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 PMPCAQ10713 525 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 CPSF6Q16630 551 aaKnown RBP eCLIP8.08□□□□□ -1.12
LCA5-203ENST00000467898 LTC4SQ16873 150 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 SPIN3Q5JUX0 258 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 TMEM164Q5U3C3 297 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 AMMECR1LQ6DCA0 310 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 ZNF880Q6PDB4 577 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 FGGYQ96C11 551 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 ZNF681Q96N22 645 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 RASL10BQ96S79 203 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 P2RX4Q99571 388 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 CITED1Q99966 193 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 RSG1Q9BU20 258 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 B4GALT6Q9UBX8 382 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 CRLS1Q9UJA2 301 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 WNT6Q9Y6F9 365 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 HEATR5AQ86XA9 2040 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 CDH23Q9H251 3354 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 A4D1N5 150 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 PIN1P1O15428 100 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 MT-ATP6P00846 226 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 MAS1P04201 325 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 SERPINA7P05543 415 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 CEBPBP17676 345 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 DUSP1P28562 367 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 SPINT3P49223 89 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 GUCA2AQ02747 115 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 ZFP36L1Q07352 338 aaKnown RBP8.08□□□□□ -1.12
LCA5-203ENST00000467898 PDGFRLQ15198 375 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 UFSP1Q6NVU6 142 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 RPTNQ6XPR3 784 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 STAC2Q6ZMT1 411 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 ATG4DQ86TL0 474 aaPredicted RBP8.08□□□□□ -1.12
LCA5-203ENST00000467898 ZNF440Q8IYI8 595 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 ZMYND19Q96E35 227 aaPredicted RBP8.08□□□□□ -1.12
LCA5-203ENST00000467898 TBX5Q99593 518 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 TRAV18A0A075B6X5 111 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 TRBV2A0A0J9YWF9 115 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 RAD51DO75771 328 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 STK17BO94768 372 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 CDS2O95674 445 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 CISD3P0C7P0 127 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 SOAT1P35610 550 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 LCN6P62502 163 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 GNMTQ14749 295 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 ZNF260Q3ZCT1 412 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 AMZ1Q400G9 498 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 FAM90A2PQ658T7 463 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 ANAPC16Q96DE5 110 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 SPATA25Q9BR10 227 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 EBPLQ9BY08 206 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 MMP25Q9NPA2 562 aa8.08□□□□□ -1.12
LCA5-203ENST00000467898 LRRK1Q38SD2 2015 aa8.07□□□□□ -1.12
LCA5-203ENST00000467898 BNIP3LO60238 219 aa8.07□□□□□ -1.12
LCA5-203ENST00000467898 NPIPB7O75200 414 aa8.07□□□□□ -1.12
LCA5-203ENST00000467898 DEDDO75618 318 aa8.07□□□□□ -1.12
LCA5-203ENST00000467898 SFT2D2O95562 160 aa8.07□□□□□ -1.12
LCA5-203ENST00000467898 GDF5P43026 501 aa8.07□□□□□ -1.12
LCA5-203ENST00000467898 GALR1P47211 349 aa8.07□□□□□ -1.12
LCA5-203ENST00000467898 DUSP3P51452 185 aaPredicted RBP8.07□□□□□ -1.12
LCA5-203ENST00000467898 HSD52Q0P140 79 aa8.07□□□□□ -1.12
LCA5-203ENST00000467898 CD300EQ496F6 205 aaPredicted RBP8.07□□□□□ -1.12
LCA5-203ENST00000467898 ALG10Q5BKT4 473 aa8.07□□□□□ -1.12
LCA5-203ENST00000467898 FRG2Q64ET8 278 aa8.07□□□□□ -1.12
LCA5-203ENST00000467898 LRRC69Q6ZNQ3 347 aa8.07□□□□□ -1.12
LCA5-203ENST00000467898 YRDCQ86U90 279 aaKnown RBP8.07□□□□□ -1.12
LCA5-203ENST00000467898 OR5AR1Q8NGP9 310 aa8.07□□□□□ -1.12
LCA5-203ENST00000467898 FAM213BQ8TBF2 198 aa8.07□□□□□ -1.12
LCA5-203ENST00000467898 FRG2BQ96QU4 278 aa8.07□□□□□ -1.12
LCA5-203ENST00000467898 AGMATQ9BSE5 352 aa8.07□□□□□ -1.12
LCA5-203ENST00000467898 PARP12Q9H0J9 701 aaKnown RBP8.07□□□□□ -1.12
LCA5-203ENST00000467898 LIPGQ9Y5X9 500 aa8.07□□□□□ -1.12
LCA5-203ENST00000467898 CHD9Q3L8U1 2897 aa8.07□□□□□ -1.12
LCA5-203ENST00000467898 ODAMA1E959 279 aa8.07□□□□□ -1.12
LCA5-203ENST00000467898 OR2AG2A6NM03 316 aa8.07□□□□□ -1.12
LCA5-203ENST00000467898 M0QYG6 137 aa8.07□□□□□ -1.12
LCA5-203ENST00000467898 SLC33A1O00400 549 aaPredicted RBP8.07□□□□□ -1.12
LCA5-203ENST00000467898 SLC17A3O00476 420 aa8.07□□□□□ -1.12
LCA5-203ENST00000467898 ATXN7O15265 892 aaPredicted RBP8.07□□□□□ -1.12
LCA5-203ENST00000467898 WIPF1O43516 503 aa8.07□□□□□ -1.12
LCA5-203ENST00000467898 CD5LO43866 347 aa8.07□□□□□ -1.12
LCA5-203ENST00000467898 GDF9O60383 454 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms