RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 SHFQ7M4L6 423 aa7.86□□□□□ -1.15
HDAC3-203ENST00000467533 ANGPTL5Q86XS5 388 aa7.86□□□□□ -1.15
HDAC3-203ENST00000467533 RNF148Q8N7C7 305 aa7.86□□□□□ -1.15
HDAC3-203ENST00000467533 Q8N9W7 124 aa7.86□□□□□ -1.15
HDAC3-203ENST00000467533 EMG1Q92979 244 aaKnown RBP7.86□□□□□ -1.15
HDAC3-203ENST00000467533 SLAMF9Q96A28 289 aa7.86□□□□□ -1.15
HDAC3-203ENST00000467533 CEP19Q96LK0 163 aa7.86□□□□□ -1.15
HDAC3-203ENST00000467533 ELOVL1Q9BW60 279 aa7.86□□□□□ -1.15
HDAC3-203ENST00000467533 PKIBQ9C010 78 aa7.86□□□□□ -1.15
HDAC3-203ENST00000467533 U3KQV3 271 aa7.86□□□□□ -1.15
HDAC3-203ENST00000467533 IGHV4OR15-8A0A075B7B6 117 aa7.85□□□□□ -1.15
HDAC3-203ENST00000467533 A0A087WW49 117 aa7.85□□□□□ -1.15
HDAC3-203ENST00000467533 A0A087X0M5 115 aa7.85□□□□□ -1.15
HDAC3-203ENST00000467533 IGHV3-72A0A0B4J1Y9 119 aa7.85□□□□□ -1.15
HDAC3-203ENST00000467533 A0A0U1RQV5 110 aa7.85□□□□□ -1.15
HDAC3-203ENST00000467533 A0A1B0GX30 115 aa7.85□□□□□ -1.15
HDAC3-203ENST00000467533 CXCR6O00574 342 aa7.85□□□□□ -1.15
HDAC3-203ENST00000467533 MRASO14807 208 aa7.85□□□□□ -1.15
HDAC3-203ENST00000467533 IGHV3-7P01780 117 aa7.85□□□□□ -1.15
HDAC3-203ENST00000467533 H2AFXP16104 143 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-203ENST00000467533 RHCEP18577 417 aa7.85□□□□□ -1.15
HDAC3-203ENST00000467533 ERP29P30040 261 aaKnown RBP7.85□□□□□ -1.15
HDAC3-203ENST00000467533 OR3A1P47881 315 aa7.85□□□□□ -1.15
HDAC3-203ENST00000467533 NUDT2P50583 147 aa7.85□□□□□ -1.15
HDAC3-203ENST00000467533 KIAA0141Q14154 515 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-203ENST00000467533 TRPM8Q7Z2W7 1104 aa7.85□□□□□ -1.15
HDAC3-203ENST00000467533 MOB3BQ86TA1 216 aa7.85□□□□□ -1.15
HDAC3-203ENST00000467533 SLC15A3Q8IY34 581 aa7.85□□□□□ -1.15
HDAC3-203ENST00000467533 THEM6Q8WUY1 208 aa7.85□□□□□ -1.15
HDAC3-203ENST00000467533 EAF1Q96JC9 268 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-203ENST00000467533 CHCHD6Q9BRQ6 235 aa7.85□□□□□ -1.15
HDAC3-203ENST00000467533 KRTAP4-5Q9BYR2 181 aa7.85□□□□□ -1.15
HDAC3-203ENST00000467533 GPR84Q9NQS5 396 aa7.85□□□□□ -1.15
HDAC3-203ENST00000467533 PLA2G2EQ9NZK7 142 aa7.85□□□□□ -1.15
HDAC3-203ENST00000467533 NDUFAF4Q9P032 175 aa7.85□□□□□ -1.15
HDAC3-203ENST00000467533 IL36RNQ9UBH0 155 aa7.85□□□□□ -1.15
HDAC3-203ENST00000467533 MRPS28Q9Y2Q9 187 aaKnown RBP7.85□□□□□ -1.15
HDAC3-203ENST00000467533 KLK5Q9Y337 293 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-203ENST00000467533 CDH10Q9Y6N8 788 aa7.85□□□□□ -1.15
HDAC3-203ENST00000467533 FAM230AA0A1W2PPH8 454 aa7.84□□□□□ -1.15
HDAC3-203ENST00000467533 FUOMA2VDF0 154 aa7.84□□□□□ -1.15
HDAC3-203ENST00000467533 J3QR06 171 aa7.84□□□□□ -1.15
HDAC3-203ENST00000467533 SIRPB1O00241 398 aa7.84□□□□□ -1.15
HDAC3-203ENST00000467533 GSTA4O15217 222 aa7.84□□□□□ -1.15
HDAC3-203ENST00000467533 IGF1P05019 195 aa7.84□□□□□ -1.15
HDAC3-203ENST00000467533 DUSP1P28562 367 aa7.84□□□□□ -1.15
HDAC3-203ENST00000467533 GSTT1P30711 240 aa7.84□□□□□ -1.15
HDAC3-203ENST00000467533 SOX6P35712 828 aa7.84□□□□□ -1.15
HDAC3-203ENST00000467533 GSSP48637 474 aa7.84□□□□□ -1.15
HDAC3-203ENST00000467533 GNG10P50151 68 aa7.84□□□□□ -1.15
HDAC3-203ENST00000467533 SNU13P55769 128 aaKnown RBP7.84□□□□□ -1.15
HDAC3-203ENST00000467533 ZNF91Q05481 1191 aa7.84□□□□□ -1.15
HDAC3-203ENST00000467533 CLVS2Q5SYC1 327 aa7.84□□□□□ -1.15
HDAC3-203ENST00000467533 LINC01590Q5TEZ4 76 aa7.84□□□□□ -1.15
HDAC3-203ENST00000467533 RPL13AP3Q6NVV1 102 aa7.84□□□□□ -1.15
HDAC3-203ENST00000467533 CEMP1Q6PRD7 247 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-203ENST00000467533 OR2T10Q8NGZ9 312 aa7.84□□□□□ -1.15
HDAC3-203ENST00000467533 RP9Q8TA86 221 aaKnown RBP7.84□□□□□ -1.15
HDAC3-203ENST00000467533 OR51E1Q8TCB6 317 aa7.84□□□□□ -1.15
HDAC3-203ENST00000467533 CORO2AQ92828 525 aa7.84□□□□□ -1.15
HDAC3-203ENST00000467533 LEAP2Q969E1 77 aa7.84□□□□□ -1.15
HDAC3-203ENST00000467533 FAM162AQ96A26 154 aa7.84□□□□□ -1.15
HDAC3-203ENST00000467533 FUZQ9BT04 418 aa7.84□□□□□ -1.15
HDAC3-203ENST00000467533 NMNAT2Q9BZQ4 307 aa7.84□□□□□ -1.15
HDAC3-203ENST00000467533 PLEKHA3Q9HB20 300 aa7.84□□□□□ -1.15
HDAC3-203ENST00000467533 ING3Q9NXR8 418 aa7.84□□□□□ -1.15
HDAC3-203ENST00000467533 GMPR2Q9P2T1 348 aaKnown RBP7.84□□□□□ -1.15
HDAC3-203ENST00000467533 SHISA3A0PJX4 238 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 ZNF729A6NN14 1252 aaPredicted RBP7.83□□□□□ -1.16
HDAC3-203ENST00000467533 HSD17B6O14756 317 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 DHRS3O75911 302 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 GADD45GO95257 159 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 NPPAP01160 153 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 LGALS1P09382 135 aaKnown RBP7.83□□□□□ -1.16
HDAC3-203ENST00000467533 IFNGR2P38484 337 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 GLIPR1P48060 266 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 REG1BP48304 166 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 RAB9AP51151 201 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 AESQ08117 197 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 TSPAN31Q12999 210 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 EBI3Q14213 229 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 LGALS9CQ6DKI2 356 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 IZUMO1Q8IYV9 350 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 ENTHD1Q8IYW4 607 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 Q8N6K4 173 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 ZNF454Q8N9F8 522 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 HAVCR2Q8TDQ0 301 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 GNPDA2Q8TDQ7 276 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 OTULINQ96BN8 352 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 KIRREL1Q96J84 757 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 DHRS1Q96LJ7 313 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 S1PR3Q99500 378 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 CADM1Q9BY67 442 aaKnown RBP7.83□□□□□ -1.16
HDAC3-203ENST00000467533 TOLLIPQ9H0E2 274 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 TAS2R1Q9NYW7 299 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 MTCH1Q9NZJ7 389 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 ZNF107Q9UII5 783 aaPredicted RBP7.83□□□□□ -1.16
HDAC3-203ENST00000467533 ZNF580Q9UK33 172 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 WSB1Q9Y6I7 421 aa7.83□□□□□ -1.16
HDAC3-203ENST00000467533 IGHV1-3A0A0C4DH29 117 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms