RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 IL36RNQ9UBH0 155 aa9.82□□□□□ -0.84
HPS1-208ENST00000467246 SHPKQ9UHJ6 478 aa9.82□□□□□ -0.84
HPS1-208ENST00000467246 ZNF175Q9Y473 711 aa9.82□□□□□ -0.84
HPS1-208ENST00000467246 SHANK1Q9Y566 2161 aa9.82□□□□□ -0.84
HPS1-208ENST00000467246 CD300LBA8K4G0 201 aa9.82□□□□□ -0.84
HPS1-208ENST00000467246 A8MXK9 166 aa9.82□□□□□ -0.84
HPS1-208ENST00000467246 ZNF732B4DXR9 585 aa9.82□□□□□ -0.84
HPS1-208ENST00000467246 BCL2L11O43521 198 aa9.82□□□□□ -0.84
HPS1-208ENST00000467246 FUT3P21217 361 aa9.82□□□□□ -0.84
HPS1-208ENST00000467246 DHRS11Q6UWP2 260 aa9.82□□□□□ -0.84
HPS1-208ENST00000467246 INO80EQ8NBZ0 244 aaPredicted RBP9.82□□□□□ -0.84
HPS1-208ENST00000467246 RRNAD1Q96FB5 475 aaKnown RBP9.82□□□□□ -0.84
HPS1-208ENST00000467246 ZNF471Q9BX82 626 aaPredicted RBP9.82□□□□□ -0.84
HPS1-208ENST00000467246 DECR2Q9NUI1 292 aa9.82□□□□□ -0.84
HPS1-208ENST00000467246 PFDN2Q9UHV9 154 aa9.82□□□□□ -0.84
HPS1-208ENST00000467246 MED12LQ86YW9 2145 aa9.82□□□□□ -0.84
HPS1-208ENST00000467246 ZNF292O60281 2723 aa9.82□□□□□ -0.84
HPS1-208ENST00000467246 RIF1Q5UIP0 2472 aaKnown RBP9.82□□□□□ -0.84
HPS1-208ENST00000467246 CST4P01036 141 aa9.81□□□□□ -0.84
HPS1-208ENST00000467246 APLNRP35414 380 aa9.81□□□□□ -0.84
HPS1-208ENST00000467246 CYCSP99999 105 aaKnown RBP9.81□□□□□ -0.84
HPS1-208ENST00000467246 MDP1Q86V88 176 aa9.81□□□□□ -0.84
HPS1-208ENST00000467246 CBLN2Q8IUK8 224 aa9.81□□□□□ -0.84
HPS1-208ENST00000467246 GCNT2Q8N0V5 402 aa9.81□□□□□ -0.84
HPS1-208ENST00000467246 DCUN1D4Q92564 292 aa9.81□□□□□ -0.84
HPS1-208ENST00000467246 MTCH1Q9NZJ7 389 aa9.81□□□□□ -0.84
HPS1-208ENST00000467246 BOD1L1Q8NFC6 3051 aa9.81□□□□□ -0.84
HPS1-208ENST00000467246 A0A1W2PR80 420 aa9.81□□□□□ -0.84
HPS1-208ENST00000467246 C3orf80F5H4A9 247 aa9.81□□□□□ -0.84
HPS1-208ENST00000467246 GPR31O00270 319 aa9.81□□□□□ -0.84
HPS1-208ENST00000467246 IFNA2P01563 188 aa9.81□□□□□ -0.84
HPS1-208ENST00000467246 CTSDP07339 412 aaPredicted RBP9.81□□□□□ -0.84
HPS1-208ENST00000467246 FXYD4P59646 89 aa9.81□□□□□ -0.84
HPS1-208ENST00000467246 UBA52P62987 128 aaKnown RBP9.81□□□□□ -0.84
HPS1-208ENST00000467246 IGFBP7Q16270 282 aa9.81□□□□□ -0.84
HPS1-208ENST00000467246 C5orf24Q7Z6I8 188 aa9.81□□□□□ -0.84
HPS1-208ENST00000467246 Q8NFD4 153 aa9.81□□□□□ -0.84
HPS1-208ENST00000467246 OR5AC2Q9NZP5 309 aa9.81□□□□□ -0.84
HPS1-208ENST00000467246 GSKIPQ9P0R6 139 aa9.81□□□□□ -0.84
HPS1-208ENST00000467246 ZMAT5Q9UDW3 170 aaKnown RBP9.81□□□□□ -0.84
HPS1-208ENST00000467246 DSPP15924 2871 aaKnown RBP9.81□□□□□ -0.84
HPS1-208ENST00000467246 TEX13DA0A0J9YY54 714 aaPredicted RBP9.8□□□□□ -0.84
HPS1-208ENST00000467246 SYNGR1O43759 233 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 CBR1P16152 277 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 FCGR2CP31995 323 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 SPATA46Q5T0L3 261 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 UNQ6126/PRO20091Q6UXV3 157 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 MYPOPQ86VE0 399 aaPredicted RBP9.8□□□□□ -0.84
HPS1-208ENST00000467246 ZFHX2Q9C0A1 2572 aaPredicted RBP9.8□□□□□ -0.84
HPS1-208ENST00000467246 TRBV6-7A0A0A0MS04 114 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 F5H0A9 414 aaPredicted RBP9.8□□□□□ -0.84
HPS1-208ENST00000467246 DUSP1P28562 367 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 RBMXP38159 391 aaKnown RBP9.8□□□□□ -0.84
HPS1-208ENST00000467246 ECI1P42126 302 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 PIGPP57054 158 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 RAB32Q13637 225 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 SP6Q3SY56 376 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 P4HA3Q7Z4N8 544 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 SGPP2Q8IWX5 399 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 PDZD9Q8IXQ8 264 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 CLRN3Q8NCR9 226 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 SLC30A7Q8NEW0 376 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 ZNF286AQ9HBT8 521 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 MSGN1A6NI15 193 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 CRYM-AS1A6NIL9 109 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 HSPB6O14558 160 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 CELA3BP08861 270 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 ZNF728P0DKX0 622 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 IL15RAQ13261 267 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 RBM39Q14498 530 aaKnown RBP9.8□□□□□ -0.84
HPS1-208ENST00000467246 OR2T2Q6IF00 324 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 POC1AQ8NBT0 407 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 EXTL1Q92935 676 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 C2orf50Q96LR7 162 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 ZNF488Q96MN9 340 aa9.8□□□□□ -0.84
HPS1-208ENST00000467246 TNRC6AQ8NDV7 1962 aaKnown RBP9.79□□□□□ -0.84
HPS1-208ENST00000467246 TRAV20A0A0B4J274 112 aa9.79□□□□□ -0.84
HPS1-208ENST00000467246 LINC00587B1AMM8 73 aa9.79□□□□□ -0.84
HPS1-208ENST00000467246 FGF2P09038 288 aa9.79□□□□□ -0.84
HPS1-208ENST00000467246 RD3LP0DJH9 198 aa9.79□□□□□ -0.84
HPS1-208ENST00000467246 GLI4P10075 376 aa9.79□□□□□ -0.84
HPS1-208ENST00000467246 KCNJ3P48549 501 aa9.79□□□□□ -0.84
HPS1-208ENST00000467246 FGF12P61328 243 aa9.79□□□□□ -0.84
HPS1-208ENST00000467246 PHLDA2Q53GA4 152 aa9.79□□□□□ -0.84
HPS1-208ENST00000467246 TMEM211Q6ICI0 200 aa9.79□□□□□ -0.84
HPS1-208ENST00000467246 HAGHLQ6PII5 290 aaPredicted RBP9.79□□□□□ -0.84
HPS1-208ENST00000467246 BPIFCQ8NFQ6 507 aa9.79□□□□□ -0.84
HPS1-208ENST00000467246 OR5A2Q8NGI9 324 aa9.79□□□□□ -0.84
HPS1-208ENST00000467246 OR5P3Q8WZ94 311 aa9.79□□□□□ -0.84
HPS1-208ENST00000467246 GMPPAQ96IJ6 420 aaPredicted RBP9.79□□□□□ -0.84
HPS1-208ENST00000467246 HIST1H2AAQ96QV6 131 aa9.79□□□□□ -0.84
HPS1-208ENST00000467246 C1orf123Q9NWV4 160 aa9.79□□□□□ -0.84
HPS1-208ENST00000467246 RASL12Q9NYN1 266 aa9.79□□□□□ -0.84
HPS1-208ENST00000467246 TMEM200AQ86VY9 491 aa9.79□□□□□ -0.84
HPS1-208ENST00000467246 FOXRED2Q8IWF2 684 aa9.79□□□□□ -0.84
HPS1-208ENST00000467246 TRIB1Q96RU8 372 aa9.79□□□□□ -0.84
HPS1-208ENST00000467246 MED9Q9NWA0 146 aa9.79□□□□□ -0.84
HPS1-208ENST00000467246 MLXQ9UH92 298 aa9.79□□□□□ -0.84
HPS1-208ENST00000467246 PRELID3BQ9Y3B1 194 aa9.79□□□□□ -0.84
HPS1-208ENST00000467246 TRBV23-1A0A0A0MS06 115 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms