RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 SLC9A3P48764 834 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 GNB1P62873 340 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 FAM3AP98173 230 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 KRR1Q13601 381 aaKnown RBP4.42□□□□□ -1.7
NCL-208ENST00000466274 HNF4GQ14541 408 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 TWIST1Q15672 202 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 MEP1BQ16820 701 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 DUSP7Q16829 419 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 MESTQ5EB52 335 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 SLC16A9Q7RTY1 509 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 CATSPERDQ86XM0 798 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 TGIF2LXQ8IUE1 241 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 NKAIN4Q8IVV8 208 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 CD177Q8N6Q3 437 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 ZNF491Q8N8L2 437 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 FAM156AQ8NDB6 213 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 OR52L1Q8NGH7 329 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 OSR1Q8TAX0 266 aaPredicted RBP4.42□□□□□ -1.7
NCL-208ENST00000466274 MYOZ3Q8TDC0 251 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 IFT81Q8WYA0 676 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 OR5P3Q8WZ94 311 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 Q96M85 177 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 OR5B12Q96R08 314 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 RASL11BQ9BPW5 248 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 COPS4Q9BT78 406 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 NUAK2Q9H093 628 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 ABCG5Q9H222 651 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 VIPAS39Q9H9C1 493 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 GNB4Q9HAV0 340 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 LIN7CQ9NUP9 197 aaKnown RBP4.42□□□□□ -1.7
NCL-208ENST00000466274 CYB5R1Q9UHQ9 305 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 MRM2Q9UI43 246 aaKnown RBP4.42□□□□□ -1.7
NCL-208ENST00000466274 RHBDD3Q9Y3P4 386 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 LINC00312Q9Y6C7 94 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 SORL1Q92673 2214 aa4.42□□□□□ -1.7
NCL-208ENST00000466274 PKHD1P08F94 4074 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 TRAV27A0A087WT01 109 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 FAM90A10PA6NDY2 464 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 ZNF850A8MQ14 1090 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 EFCAB9A8MZ26 197 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 C16orf90A8MZG2 172 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 M0QX08 132 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 MPZL2O60487 215 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 RGS11O94810 467 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 CST4P01036 141 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 APOC1P02654 83 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 INAFM2P0DMQ5 153 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 TROVE2P10155 538 aaKnown RBP eCLIP4.41□□□□□ -1.7
NCL-208ENST00000466274 IDO1P14902 403 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 DCTDP32321 178 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 GPR4P46093 362 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 GNG3P63215 75 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 ZNF45Q02386 682 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 PRDX4Q13162 271 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 SOHLH1Q5JUK2 328 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 TRMT10CQ7L0Y3 403 aaKnown RBP4.41□□□□□ -1.7
NCL-208ENST00000466274 RBM45Q8IUH3 476 aaKnown RBP4.41□□□□□ -1.7
NCL-208ENST00000466274 LINC00346Q8IVM7 164 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 MSRB3Q8IXL7 192 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 Q8N402 240 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 GVQW1Q8N7I0 195 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 ASCC1Q8N9N2 400 aaKnown RBP4.41□□□□□ -1.7
NCL-208ENST00000466274 C11orf65Q8NCR3 313 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 OR4D11Q8NGI4 311 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 OR56B4Q8NH76 319 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 TOMM40LQ969M1 308 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 REEP6Q96HR9 211 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 KCTD7Q96MP8 289 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 BARHL1Q9BZE3 327 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 GAL3ST2Q9H3Q3 398 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 RGCCQ9H4X1 137 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 PLEKHA3Q9HB20 300 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 PNRC2Q9NPJ4 139 aaKnown RBP4.41□□□□□ -1.7
NCL-208ENST00000466274 SLC2A8Q9NY64 477 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 ENPP5Q9UJA9 477 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 RIMS3Q9UJD0 308 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 SLC22A13Q9Y226 551 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 ADAM18Q9Y3Q7 739 aa4.41□□□□□ -1.7
NCL-208ENST00000466274 AMMECR1Q9Y4X0 333 aaPredicted RBP4.41□□□□□ -1.7
NCL-208ENST00000466274 hCG_38984A0A1B0GV85 526 aa4.4□□□□□ -1.71
NCL-208ENST00000466274 NXPH2O95156 264 aa4.4□□□□□ -1.71
NCL-208ENST00000466274 IGLV1-47P01700 117 aa4.4□□□□□ -1.71
NCL-208ENST00000466274 HSPB1P04792 205 aaKnown RBP4.4□□□□□ -1.71
NCL-208ENST00000466274 TFAP2AP05549 437 aa4.4□□□□□ -1.71
NCL-208ENST00000466274 ANXA2P07355 339 aaKnown RBP4.4□□□□□ -1.71
NCL-208ENST00000466274 OTX1P32242 354 aaPredicted RBP4.4□□□□□ -1.71
NCL-208ENST00000466274 BMI1P35226 326 aa4.4□□□□□ -1.71
NCL-208ENST00000466274 SLC15A1P46059 708 aa4.4□□□□□ -1.71
NCL-208ENST00000466274 OR1E2P47887 323 aa4.4□□□□□ -1.71
NCL-208ENST00000466274 GLIPR1P48060 266 aa4.4□□□□□ -1.71
NCL-208ENST00000466274 RPL14P50914 215 aaKnown RBP4.4□□□□□ -1.71
NCL-208ENST00000466274 RAB7AP51149 207 aa4.4□□□□□ -1.71
NCL-208ENST00000466274 RAB9AP51151 201 aa4.4□□□□□ -1.71
NCL-208ENST00000466274 GPM6AP51674 278 aa4.4□□□□□ -1.71
NCL-208ENST00000466274 RPS6KA3P51812 740 aa4.4□□□□□ -1.71
NCL-208ENST00000466274 PRKXP51817 358 aa4.4□□□□□ -1.71
NCL-208ENST00000466274 POLR2JP52435 117 aaKnown RBP4.4□□□□□ -1.71
NCL-208ENST00000466274 CD81P60033 236 aa4.4□□□□□ -1.71
NCL-208ENST00000466274 NANOS2P60321 138 aaKnown RBP4.4□□□□□ -1.71
NCL-208ENST00000466274 CFHR3Q02985 330 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 185.4 ms