RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 PQLC2LA1A4F0 135 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 MEX3AA1L020 520 aaKnown RBP3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 ANKRD61A6NGH8 418 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 OR4C45A6NMZ5 311 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 J3QLI3 93 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 J3QLW9 94 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 IFNL4K9M1U5 179 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 PHYHO14832 338 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 CASQ2O14958 399 aaPredicted RBP3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 FOXH1O75593 365 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 SULT1C4O75897 302 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 KRT8P05787 483 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 CALCBP10092 127 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 PSG2P11465 335 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 IRF2P14316 349 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 ZNF19P17023 458 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 HNF1AP20823 631 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 CFL1P23528 166 aaKnown RBP3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 HAAOP46952 286 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 TGM4P49221 684 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 FGF12P61328 243 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 ERVK11-1P61568 191 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 ARF6P62330 175 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 IL5RAQ01344 420 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 CFHR3Q02985 330 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 TMED1Q13445 227 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 CNN3Q15417 329 aaKnown RBP3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 DGUOKQ16854 277 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 CLVS2Q5SYC1 327 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 MEDAGQ5VYS4 303 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 HAGHLQ6PII5 290 aaPredicted RBP3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 BTN2A1Q7KYR7 527 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 PDZD9Q8IXQ8 264 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 CD177Q8N6Q3 437 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 Q8N7P7 452 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 SIGLECL1Q8N7X8 197 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 ZDHHC22Q8N966 263 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 ZNRF1Q8ND25 227 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 OR8B3Q8NGG8 313 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 OR5A2Q8NGI9 324 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 TRUB1Q8WWH5 349 aaKnown RBP3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 CYGBQ8WWM9 190 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 ST8SIA4Q92187 359 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 SGCDQ92629 289 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 GGHQ92820 318 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 CYYR1Q96J86 154 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 C4orf36Q96KX1 117 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 TECTBQ96PL2 329 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 SPACA5Q96QH8 159 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 OR8B2Q96RD0 313 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 MICU1Q9BPX6 476 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 PDCD1LG2Q9BQ51 273 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 C19orf24Q9BVV8 132 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 RTL8AQ9BWD3 113 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 SIRPDQ9H106 197 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 VCXQ9H320 206 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 RNPEPL1Q9HAU8 725 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 TRIM36Q9NQ86 728 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 SMPD3Q9NY59 655 aaPredicted RBP3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 MTCH1Q9NZJ7 389 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 ERVK-18Q9QC07 812 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 KAAG1Q9UBP8 84 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 DNAJB11Q9UBS4 358 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 CLN8Q9UBY8 286 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 CLEC2DQ9UHP7 191 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 ENPP5Q9UJA9 477 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 ZNF391Q9UJN7 358 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 MAB21L2Q9Y586 359 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 PCDHGB5Q9Y5G0 923 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 ORC6Q9Y5N6 252 aa3.93□□□□□ -1.78
EXOSC3-204ENST00000465860 TRAV38-1A0A0B4J264 116 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 TRAV40A0A0B4J280 105 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 IGKV1-12A0A0C4DH73 117 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 CENPVL3A0A0U1RRI6 287 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 FAM230AA0A1W2PPH8 454 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 TMEM210A6NLX4 147 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 ANXA2P2A6NMY6 339 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 OR2AT4A6NND4 320 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 SYT7O43581 403 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 SPRY1O43609 319 aaPredicted RBP3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 TCF21O43680 179 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 XPNPEP2O43895 674 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 IFNA2P01563 188 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 IGKV1D-12P01611 117 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 HTR1AP08908 422 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 ACAA1P09110 424 aaPredicted RBP3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 PGA5P0DJD9 388 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 ATP6V1B1P15313 513 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 MUC1P15941 1255 aaPredicted RBP3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 GLRA1P23415 457 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 MPZP25189 248 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 PAX6P26367 422 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 ATP6V1E1P36543 226 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 NPBWR2P48146 333 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 HILS1P60008 231 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 GNG3P63215 75 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 KLRD1Q13241 179 aa3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 ALKBH1Q13686 389 aaKnown RBP3.92□□□□□ -1.78
EXOSC3-204ENST00000465860 MICBQ29980 383 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms