RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 JAGN1Q8N5M9 183 aa16.74■□□□□ 0.27
SKA3-205ENST00000465471 ASCC1Q8N9N2 400 aaKnown RBP16.74■□□□□ 0.27
SKA3-205ENST00000465471 OR10K1Q8NGX5 313 aa16.74■□□□□ 0.27
SKA3-205ENST00000465471 WDFY2Q96P53 400 aa16.74■□□□□ 0.27
SKA3-205ENST00000465471 TBX15Q96SF7 602 aa16.74■□□□□ 0.27
SKA3-205ENST00000465471 UQCC2Q9BRT2 126 aa16.74■□□□□ 0.27
SKA3-205ENST00000465471 METTL9Q9H1A3 318 aa16.74■□□□□ 0.27
SKA3-205ENST00000465471 GLS2Q9UI32 602 aa16.74■□□□□ 0.27
SKA3-205ENST00000465471 CCRL2O00421 344 aa16.73■□□□□ 0.27
SKA3-205ENST00000465471 SH2D1BO14796 132 aa16.73■□□□□ 0.27
SKA3-205ENST00000465471 TNFAIP8O95379 198 aa16.73■□□□□ 0.27
SKA3-205ENST00000465471 SYT6Q5T7P8 510 aaPredicted RBP16.73■□□□□ 0.27
SKA3-205ENST00000465471 CHST4Q8NCG5 386 aa16.73■□□□□ 0.27
SKA3-205ENST00000465471 OR4D6Q8NGJ1 314 aa16.73■□□□□ 0.27
SKA3-205ENST00000465471 TBC1D15Q8TC07 691 aa16.73■□□□□ 0.27
SKA3-205ENST00000465471 MUL1Q969V5 352 aa16.73■□□□□ 0.27
SKA3-205ENST00000465471 MRPS28Q9Y2Q9 187 aaKnown RBP16.73■□□□□ 0.27
SKA3-205ENST00000465471 ZNF780AO75290 641 aaPredicted RBP16.72■□□□□ 0.27
SKA3-205ENST00000465471 ARL6IP5O75915 188 aa16.72■□□□□ 0.27
SKA3-205ENST00000465471 TOX4O94842 621 aa16.72■□□□□ 0.27
SKA3-205ENST00000465471 EPHA1P21709 976 aa16.72■□□□□ 0.27
SKA3-205ENST00000465471 GALP22466 123 aa16.72■□□□□ 0.27
SKA3-205ENST00000465471 PSMB9P28065 219 aa16.72■□□□□ 0.27
SKA3-205ENST00000465471 OR3A1P47881 315 aa16.72■□□□□ 0.27
SKA3-205ENST00000465471 ARF6P62330 175 aa16.72■□□□□ 0.27
SKA3-205ENST00000465471 RPL31P62899 125 aaKnown RBP16.72■□□□□ 0.27
SKA3-205ENST00000465471 METTL11BQ5VVY1 283 aa16.72■□□□□ 0.27
SKA3-205ENST00000465471 Q8N7P7 452 aa16.72■□□□□ 0.27
SKA3-205ENST00000465471 OR5D13Q8NGL4 314 aa16.72■□□□□ 0.27
SKA3-205ENST00000465471 GFI1Q99684 422 aa16.72■□□□□ 0.27
SKA3-205ENST00000465471 ZNF696Q9H7X3 374 aa16.72■□□□□ 0.27
SKA3-205ENST00000465471 ING4Q9UNL4 249 aa16.72■□□□□ 0.27
SKA3-205ENST00000465471 A0A0G2JK05 382 aa16.71■□□□□ 0.27
SKA3-205ENST00000465471 TRDV1A0A1B0GX56 115 aa16.71■□□□□ 0.27
SKA3-205ENST00000465471 M0R1W7 72 aa16.71■□□□□ 0.27
SKA3-205ENST00000465471 SIRPB1O00241 398 aa16.71■□□□□ 0.27
SKA3-205ENST00000465471 HTR3BO95264 441 aa16.71■□□□□ 0.27
SKA3-205ENST00000465471 IGHV4-38-2P0DP08 117 aa16.71■□□□□ 0.27
SKA3-205ENST00000465471 RBM11P57052 281 aaKnown RBP16.71■□□□□ 0.27
SKA3-205ENST00000465471 KRTAP21-3Q3LHN1 58 aa16.71■□□□□ 0.27
SKA3-205ENST00000465471 PIGYQ3MUY2 71 aa16.71■□□□□ 0.27
SKA3-205ENST00000465471 C1orf100Q5SVJ3 147 aa16.71■□□□□ 0.27
SKA3-205ENST00000465471 GLIPR1L1Q6UWM5 242 aa16.71■□□□□ 0.27
SKA3-205ENST00000465471 C1orf122Q6ZSJ8 110 aa16.71■□□□□ 0.27
SKA3-205ENST00000465471 OR4S1Q8NGB4 309 aa16.71■□□□□ 0.27
SKA3-205ENST00000465471 FOXRED1Q96CU9 486 aaPredicted RBP16.71■□□□□ 0.27
SKA3-205ENST00000465471 IFT22Q9H7X7 185 aa16.71■□□□□ 0.27
SKA3-205ENST00000465471 UNKLQ9H9P5 680 aaKnown RBP16.71■□□□□ 0.27
SKA3-205ENST00000465471 ONECUT1Q9UBC0 465 aa16.71■□□□□ 0.27
SKA3-205ENST00000465471 NUP50Q9UKX7 468 aa16.71■□□□□ 0.27
SKA3-205ENST00000465471 TRAV40A0A0B4J280 105 aa16.7■□□□□ 0.26
SKA3-205ENST00000465471 A0A1W2PP11 408 aa16.7■□□□□ 0.26
SKA3-205ENST00000465471 A0A1W2PQ09 198 aa16.7■□□□□ 0.26
SKA3-205ENST00000465471 SLC33A1O00400 549 aaPredicted RBP16.7■□□□□ 0.26
SKA3-205ENST00000465471 CSN2P05814 226 aa16.7■□□□□ 0.26
SKA3-205ENST00000465471 GABRR1P24046 479 aa16.7■□□□□ 0.26
SKA3-205ENST00000465471 ERP29P30040 261 aaKnown RBP16.7■□□□□ 0.26
SKA3-205ENST00000465471 SCGB2A2Q13296 93 aa16.7■□□□□ 0.26
SKA3-205ENST00000465471 GPR176Q14439 515 aa16.7■□□□□ 0.26
SKA3-205ENST00000465471 PDCD1Q15116 288 aa16.7■□□□□ 0.26
SKA3-205ENST00000465471 GRK1Q15835 563 aa16.7■□□□□ 0.26
SKA3-205ENST00000465471 GLT8D1Q68CQ7 371 aa16.7■□□□□ 0.26
SKA3-205ENST00000465471 TMEM200BQ69YZ2 307 aa16.7■□□□□ 0.26
SKA3-205ENST00000465471 AWAT2Q6E213 333 aa16.7■□□□□ 0.26
SKA3-205ENST00000465471 C9orf139Q6ZV77 190 aa16.7■□□□□ 0.26
SKA3-205ENST00000465471 CMTM4Q8IZR5 234 aa16.7■□□□□ 0.26
SKA3-205ENST00000465471 FAM185AQ8N0U4 392 aa16.7■□□□□ 0.26
SKA3-205ENST00000465471 OSR2Q8N2R0 312 aa16.7■□□□□ 0.26
SKA3-205ENST00000465471 S100A13Q99584 98 aa16.7■□□□□ 0.26
SKA3-205ENST00000465471 PCGF1Q9BSM1 259 aa16.7■□□□□ 0.26
SKA3-205ENST00000465471 CHST6Q9GZX3 395 aa16.7■□□□□ 0.26
SKA3-205ENST00000465471 SLITRK2Q9H156 845 aa16.7■□□□□ 0.26
SKA3-205ENST00000465471 TRIM64CA6NLI5 447 aa16.69■□□□□ 0.26
SKA3-205ENST00000465471 MGST3O14880 152 aa16.69■□□□□ 0.26
SKA3-205ENST00000465471 IFNA2P01563 188 aa16.69■□□□□ 0.26
SKA3-205ENST00000465471 CSTBP04080 98 aaKnown RBP16.69■□□□□ 0.26
SKA3-205ENST00000465471 ZNF44P15621 663 aa16.69■□□□□ 0.26
SKA3-205ENST00000465471 SERPINA2P20848 420 aa16.69■□□□□ 0.26
SKA3-205ENST00000465471 CALRP27797 417 aaKnown RBP16.69■□□□□ 0.26
SKA3-205ENST00000465471 ZNF273Q14593 569 aa16.69■□□□□ 0.26
SKA3-205ENST00000465471 SLC22A6Q4U2R8 563 aa16.69■□□□□ 0.26
SKA3-205ENST00000465471 METAP1DQ6UB28 335 aaPredicted RBP16.69■□□□□ 0.26
SKA3-205ENST00000465471 GDPD3Q7L5L3 318 aa16.69■□□□□ 0.26
SKA3-205ENST00000465471 TCF23Q7RTU1 214 aa16.69■□□□□ 0.26
SKA3-205ENST00000465471 VMO1Q7Z5L0 202 aa16.69■□□□□ 0.26
SKA3-205ENST00000465471 LINC00596Q86U02 117 aa16.69■□□□□ 0.26
SKA3-205ENST00000465471 C11orf42Q8N5U0 333 aa16.69■□□□□ 0.26
SKA3-205ENST00000465471 TSPAN14Q8NG11 270 aa16.69■□□□□ 0.26
SKA3-205ENST00000465471 OR4M1Q8NGD0 313 aa16.69■□□□□ 0.26
SKA3-205ENST00000465471 PPP1R35Q8TAP8 253 aa16.69■□□□□ 0.26
SKA3-205ENST00000465471 MRPS24Q96EL2 167 aaKnown RBP16.69■□□□□ 0.26
SKA3-205ENST00000465471 NR1H4Q96RI1 486 aaPredicted RBP16.69■□□□□ 0.26
SKA3-205ENST00000465471 PCDHB16Q9NRJ7 776 aa16.69■□□□□ 0.26
SKA3-205ENST00000465471 GHRLQ9UBU3 117 aa16.69■□□□□ 0.26
SKA3-205ENST00000465471 ST3GAL6Q9Y274 331 aa16.69■□□□□ 0.26
SKA3-205ENST00000465471 A0A087WXM4 84 aa16.68■□□□□ 0.26
SKA3-205ENST00000465471 TRAV1-2A0A0B4J238 106 aa16.68■□□□□ 0.26
SKA3-205ENST00000465471 TRAV24A0A0B4J272 114 aa16.68■□□□□ 0.26
SKA3-205ENST00000465471 CENPVL3A0A0U1RRI6 287 aa16.68■□□□□ 0.26
SKA3-205ENST00000465471 DEGS1O15121 323 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms