RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 ZNF737O75373 536 aa14.03□□□□□ -0.16
USP39-211ENST00000465282 NDUFB7P17568 137 aa14.03□□□□□ -0.16
USP39-211ENST00000465282 SLC22A6Q4U2R8 563 aa14.03□□□□□ -0.16
USP39-211ENST00000465282 FAM120AOSQ5T036 256 aa14.03□□□□□ -0.16
USP39-211ENST00000465282 GLIPR1L1Q6UWM5 242 aa14.03□□□□□ -0.16
USP39-211ENST00000465282 OR8H2Q8N162 312 aa14.03□□□□□ -0.16
USP39-211ENST00000465282 LY6G5BQ8NDX9 201 aa14.03□□□□□ -0.16
USP39-211ENST00000465282 OR4D6Q8NGJ1 314 aa14.03□□□□□ -0.16
USP39-211ENST00000465282 OR6M1Q8NGM8 313 aa14.03□□□□□ -0.16
USP39-211ENST00000465282 TMPRSS13Q9BYE2 586 aa14.03□□□□□ -0.16
USP39-211ENST00000465282 IFT22Q9H7X7 185 aa14.03□□□□□ -0.16
USP39-211ENST00000465282 TXNL4BQ9NX01 149 aaKnown RBP14.03□□□□□ -0.16
USP39-211ENST00000465282 MXRA5Q9NR99 2828 aa14.02□□□□□ -0.16
USP39-211ENST00000465282 H3BUI4 141 aa14.02□□□□□ -0.17
USP39-211ENST00000465282 SLC17A2O00624 439 aa14.02□□□□□ -0.17
USP39-211ENST00000465282 SLC22A1O15245 554 aa14.02□□□□□ -0.17
USP39-211ENST00000465282 TFF1P04155 84 aa14.02□□□□□ -0.17
USP39-211ENST00000465282 SELLP14151 372 aa14.02□□□□□ -0.17
USP39-211ENST00000465282 HTR2CP28335 458 aa14.02□□□□□ -0.17
USP39-211ENST00000465282 CEBPDP49716 269 aaPredicted RBP14.02□□□□□ -0.17
USP39-211ENST00000465282 MPV17LQ2QL34 196 aa14.02□□□□□ -0.17
USP39-211ENST00000465282 CHRFAM7AQ494W8 412 aa14.02□□□□□ -0.17
USP39-211ENST00000465282 C22orf42Q6IC83 251 aa14.02□□□□□ -0.17
USP39-211ENST00000465282 TPRA1Q86W33 373 aa14.02□□□□□ -0.17
USP39-211ENST00000465282 ASCC1Q8N9N2 400 aaKnown RBP14.02□□□□□ -0.17
USP39-211ENST00000465282 BEX2Q9BXY8 128 aa14.02□□□□□ -0.17
USP39-211ENST00000465282 MRPS26Q9BYN8 205 aaKnown RBP14.02□□□□□ -0.17
USP39-211ENST00000465282 CST11Q9H112 138 aa14.02□□□□□ -0.17
USP39-211ENST00000465282 IL36RNQ9UBH0 155 aa14.02□□□□□ -0.17
USP39-211ENST00000465282 METRNQ9UJH8 293 aa14.02□□□□□ -0.17
USP39-211ENST00000465282 ST3GAL6Q9Y274 331 aa14.02□□□□□ -0.17
USP39-211ENST00000465282 AUP1Q9Y679 476 aa14.02□□□□□ -0.17
USP39-211ENST00000465282 V9GY05 133 aa14.02□□□□□ -0.17
USP39-211ENST00000465282 FN1P02751 2386 aaKnown RBP14.01□□□□□ -0.17
USP39-211ENST00000465282 A0A1W2PPH5 198 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 FAM90A10PA6NDY2 464 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 FAM90A18PA6NE21 464 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 FAM90A16PA6NEW6 464 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 FAM90A20PA6NIJ5 464 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 FAM90A8PA6NJQ4 464 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 FAM90A7PA6NKC0 464 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 FAM90A22PA8MWA6 464 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 FAM90A12PA8MX19 464 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 FAM90A5PA8MXJ8 464 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 FAM90A23PA8MXZ1 464 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 MGST3O14880 152 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 DEGS1O15121 323 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 CRLF1O75462 422 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 OR2H2O95918 312 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 CSN2P05814 226 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 FAM90A15PP0C7V4 464 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 FAM90A13PP0C7W8 464 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 FAM90A14PP0C7W9 464 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 FAM90A24PP0C7X0 464 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 CALCBP10092 127 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 SERPINA2P20848 420 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 CFPP27918 469 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 DUSP1P28562 367 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 RBM11P57052 281 aaKnown RBP14.01□□□□□ -0.17
USP39-211ENST00000465282 Q6P435 159 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 C17orf107Q6ZR85 190 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 C1orf122Q6ZSJ8 110 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 GDPD3Q7L5L3 318 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 KIR3DL3Q8N743 410 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 OR10K1Q8NGX5 313 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 H1FXQ92522 213 aaKnown RBP14.01□□□□□ -0.17
USP39-211ENST00000465282 C1orf147Q96MC9 270 aaPredicted RBP14.01□□□□□ -0.17
USP39-211ENST00000465282 KCTD7Q96MP8 289 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 NKX3-1Q99801 234 aaPredicted RBP14.01□□□□□ -0.17
USP39-211ENST00000465282 PLGRKTQ9HBL7 147 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 AK6Q9Y3D8 172 aaKnown RBP14.01□□□□□ -0.17
USP39-211ENST00000465282 KPTNQ9Y664 436 aa14.01□□□□□ -0.17
USP39-211ENST00000465282 SETD2Q9BYW2 2564 aaPredicted RBP14□□□□□ -0.17
USP39-211ENST00000465282 NAV3Q8IVL0 2385 aa14□□□□□ -0.17
USP39-211ENST00000465282 ANK3Q12955 4377 aaKnown RBP14□□□□□ -0.17
USP39-211ENST00000465282 A0A0G2JK05 382 aa14□□□□□ -0.17
USP39-211ENST00000465282 TMEM82A0PJX8 343 aa14□□□□□ -0.17
USP39-211ENST00000465282 FUOMA2VDF0 154 aa14□□□□□ -0.17
USP39-211ENST00000465282 BPNT1O95861 308 aa14□□□□□ -0.17
USP39-211ENST00000465282 SMIM18P0DKX4 95 aa14□□□□□ -0.17
USP39-211ENST00000465282 ZNF44P15621 663 aa14□□□□□ -0.17
USP39-211ENST00000465282 RAB3BP20337 219 aa14□□□□□ -0.17
USP39-211ENST00000465282 GABRR1P24046 479 aa14□□□□□ -0.17
USP39-211ENST00000465282 ERP29P30040 261 aaKnown RBP14□□□□□ -0.17
USP39-211ENST00000465282 KCNJ3P48549 501 aa14□□□□□ -0.17
USP39-211ENST00000465282 SNU13P55769 128 aaKnown RBP14□□□□□ -0.17
USP39-211ENST00000465282 MEF2CQ06413 473 aaPredicted RBP14□□□□□ -0.17
USP39-211ENST00000465282 SCGB2A2Q13296 93 aa14□□□□□ -0.17
USP39-211ENST00000465282 CMTM4Q8IZR5 234 aa14□□□□□ -0.17
USP39-211ENST00000465282 KCNG3Q8TAE7 436 aa14□□□□□ -0.17
USP39-211ENST00000465282 NANPQ8TBE9 248 aa14□□□□□ -0.17
USP39-211ENST00000465282 YIPF6Q96EC8 236 aa14□□□□□ -0.17
USP39-211ENST00000465282 OR51E2Q9H255 320 aa14□□□□□ -0.17
USP39-211ENST00000465282 SPACA1Q9HBV2 294 aa14□□□□□ -0.17
USP39-211ENST00000465282 SIRPB1O00241 398 aa13.99□□□□□ -0.17
USP39-211ENST00000465282 SLC33A1O00400 549 aaPredicted RBP13.99□□□□□ -0.17
USP39-211ENST00000465282 PSPNO60542 156 aa13.99□□□□□ -0.17
USP39-211ENST00000465282 GADD45AP24522 165 aa13.99□□□□□ -0.17
USP39-211ENST00000465282 RPL31P62899 125 aaKnown RBP13.99□□□□□ -0.17
USP39-211ENST00000465282 SCN1BQ07699 218 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms