RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 PLEKHA1Q9HB21 404 aa2.06□□□□□ -2.08
CLK1-208ENST00000464454 NXT1Q9UKK6 140 aaKnown RBP2.06□□□□□ -2.08
CLK1-208ENST00000464454 PRR14LQ5THK1 2151 aa2.05□□□□□ -2.08
CLK1-208ENST00000464454 PGPA6NDG6 321 aa2.05□□□□□ -2.08
CLK1-208ENST00000464454 K7ERS5 55 aa2.05□□□□□ -2.08
CLK1-208ENST00000464454 FFAR1O14842 300 aa2.05□□□□□ -2.08
CLK1-208ENST00000464454 SOD3P08294 240 aa2.05□□□□□ -2.08
CLK1-208ENST00000464454 CECR9P0C854 216 aa2.05□□□□□ -2.08
CLK1-208ENST00000464454 PRTN3P24158 256 aa2.05□□□□□ -2.08
CLK1-208ENST00000464454 GCLMP48507 274 aa2.05□□□□□ -2.08
CLK1-208ENST00000464454 TTPAP49638 278 aa2.05□□□□□ -2.08
CLK1-208ENST00000464454 BAMBIQ13145 260 aa2.05□□□□□ -2.08
CLK1-208ENST00000464454 GLYATQ6IB77 296 aa2.05□□□□□ -2.08
CLK1-208ENST00000464454 ADM2Q7Z4H4 148 aa2.05□□□□□ -2.08
CLK1-208ENST00000464454 GALNT10Q86SR1 603 aa2.05□□□□□ -2.08
CLK1-208ENST00000464454 AMN1Q8IY45 258 aa2.05□□□□□ -2.08
CLK1-208ENST00000464454 ZNF664Q8N3J9 261 aa2.05□□□□□ -2.08
CLK1-208ENST00000464454 SPICQ8N5J4 248 aa2.05□□□□□ -2.08
CLK1-208ENST00000464454 OR8S1Q8NH09 359 aa2.05□□□□□ -2.08
CLK1-208ENST00000464454 TMEM239Q8WW34 195 aa2.05□□□□□ -2.08
CLK1-208ENST00000464454 CCDC124Q96CT7 223 aaKnown RBP2.05□□□□□ -2.08
CLK1-208ENST00000464454 PITX2Q99697 317 aa2.05□□□□□ -2.08
CLK1-208ENST00000464454 ANAPC13Q9BS18 74 aa2.05□□□□□ -2.08
CLK1-208ENST00000464454 DUSP21Q9H596 190 aa2.05□□□□□ -2.08
CLK1-208ENST00000464454 C14orf166Q9Y224 244 aaKnown RBP2.05□□□□□ -2.08
CLK1-208ENST00000464454 SSH2Q76I76 1423 aa2.05□□□□□ -2.08
CLK1-208ENST00000464454 A0A1B0GXF2 115 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 VWA8A3KMH1 1905 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 LEUTXA8MZ59 168 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 H3BQ85 93 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 PLPP3O14495 311 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 UBDO15205 165 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 ENTPD6O75354 484 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 MYO1DO94832 1006 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 CST4P01036 141 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 IGLV6-57P01721 117 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 ELK4P28324 431 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 CD34P28906 385 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 LCN1P31025 176 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 RPA3P35244 121 aaPredicted RBP2.04□□□□□ -2.08
CLK1-208ENST00000464454 TRIP13Q15645 432 aaPredicted RBP2.04□□□□□ -2.08
CLK1-208ENST00000464454 TMEM241Q24JQ0 296 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 ZNF660Q6AZW8 331 aaPredicted RBP2.04□□□□□ -2.08
CLK1-208ENST00000464454 TPGS1Q6ZTW0 290 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 CDRT4Q8N9R6 151 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 SPERTQ8NA61 448 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 C2orf15Q8WU43 125 aaKnown RBP2.04□□□□□ -2.08
CLK1-208ENST00000464454 TWIST2Q8WVJ9 160 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 IFT81Q8WYA0 676 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 CCL17Q92583 94 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 FXYD5Q96DB9 178 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 ZMYND19Q96E35 227 aaPredicted RBP2.04□□□□□ -2.08
CLK1-208ENST00000464454 CPB2Q96IY4 423 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 ZNF75AQ96N20 296 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 BIRC8Q96P09 236 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 TM2D3Q9BRN9 247 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 METTL8Q9H825 291 aaKnown RBP2.04□□□□□ -2.08
CLK1-208ENST00000464454 ASF1BQ9NVP2 202 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 RBM12B-AS1Q9P1G2 102 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 ZNF391Q9UJN7 358 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 USH1CQ9Y6N9 552 aa2.04□□□□□ -2.08
CLK1-208ENST00000464454 NID2Q14112 1375 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 ZBED9Q6R2W3 1325 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 IGKV1OR2-108A0A075B7D4 117 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 IGHV3-21A0A0B4J1V1 117 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 A0A1W2PNN7 141 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 MYBPHLA2RUH7 354 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 FAM25EA8MYX2 175 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 F8VP50 259 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 C15orf65H3BRN8 121 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 ISLRO14498 428 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 P0C880 135 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 SLC2A1P11166 492 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 HRES1P13985 223 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 M6PRP20645 277 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 COL8A2P25067 703 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 GTF2H1P32780 548 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 LGALS7P47929 136 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 KCNJ3P48549 501 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 ZNF83P51522 516 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 HADHBP55084 474 aaKnown RBP2.03□□□□□ -2.08
CLK1-208ENST00000464454 KLF3P57682 345 aaPredicted RBP2.03□□□□□ -2.08
CLK1-208ENST00000464454 UBE2KP61086 200 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 BAXQ07812 192 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 STX3Q13277 289 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 IHHQ14623 411 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 TRAM1Q15629 374 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 TAF9Q16594 264 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 DEFB134Q4QY38 66 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 SPIN3Q5JUX0 258 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 TMEM215Q68D42 235 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 ERICH5Q6P6B1 374 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 BRD3OSQ6XYD6 125 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 Q6ZT83 130 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 CPNE9Q8IYJ1 553 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 RPRMLQ8N4K4 120 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 C3orf22Q8N5N4 141 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 OR2K2Q8NGT1 345 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 OR2Y1Q8NGV0 311 aa2.03□□□□□ -2.08
CLK1-208ENST00000464454 CASTOR1Q8WTX7 329 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms