RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 ZNF418Q8TF45 676 aaPredicted RBP14.06□□□□□ -0.16
VPS52-215ENST00000464425 WDFY2Q96P53 400 aa14.06□□□□□ -0.16
VPS52-215ENST00000464425 DCTN5Q9BTE1 182 aa14.06□□□□□ -0.16
VPS52-215ENST00000464425 EXOSC4Q9NPD3 245 aaKnown RBP14.06□□□□□ -0.16
VPS52-215ENST00000464425 ONECUT1Q9UBC0 465 aa14.06□□□□□ -0.16
VPS52-215ENST00000464425 SCOCQ9UIL1 159 aa14.06□□□□□ -0.16
VPS52-215ENST00000464425 SOX21Q9Y651 276 aaPredicted RBP14.06□□□□□ -0.16
VPS52-215ENST00000464425 TRAV40A0A0B4J280 105 aa14.05□□□□□ -0.16
VPS52-215ENST00000464425 ANGPTL7O43827 346 aa14.05□□□□□ -0.16
VPS52-215ENST00000464425 KDM4BO94953 1096 aa14.05□□□□□ -0.16
VPS52-215ENST00000464425 KNG1P01042 644 aa14.05□□□□□ -0.16
VPS52-215ENST00000464425 TMEM225BP0DP42 221 aa14.05□□□□□ -0.16
VPS52-215ENST00000464425 RPL5P46777 297 aaKnown RBP14.05□□□□□ -0.16
VPS52-215ENST00000464425 GLT8D1Q68CQ7 371 aa14.05□□□□□ -0.16
VPS52-215ENST00000464425 JAGN1Q8N5M9 183 aa14.05□□□□□ -0.16
VPS52-215ENST00000464425 EMG1Q92979 244 aaKnown RBP14.05□□□□□ -0.16
VPS52-215ENST00000464425 TBX15Q96SF7 602 aa14.05□□□□□ -0.16
VPS52-215ENST00000464425 CHCHD6Q9BRQ6 235 aa14.05□□□□□ -0.16
VPS52-215ENST00000464425 MS4A7Q9GZW8 240 aaPredicted RBP14.05□□□□□ -0.16
VPS52-215ENST00000464425 RBFOX1Q9NWB1 397 aaKnown RBP14.05□□□□□ -0.16
VPS52-215ENST00000464425 IGKV1-12A0A0C4DH73 117 aa14.04□□□□□ -0.16
VPS52-215ENST00000464425 PDCD5O14737 125 aa14.04□□□□□ -0.16
VPS52-215ENST00000464425 VENTXO95231 258 aa14.04□□□□□ -0.16
VPS52-215ENST00000464425 IGKV1D-12P01611 117 aa14.04□□□□□ -0.16
VPS52-215ENST00000464425 MMP9P14780 707 aa14.04□□□□□ -0.16
VPS52-215ENST00000464425 MYL9P24844 172 aa14.04□□□□□ -0.16
VPS52-215ENST00000464425 SNU13P55769 128 aaKnown RBP14.04□□□□□ -0.16
VPS52-215ENST00000464425 CAV3P56539 151 aa14.04□□□□□ -0.16
VPS52-215ENST00000464425 COL10A1Q03692 680 aa14.04□□□□□ -0.16
VPS52-215ENST00000464425 KRTAP24-1Q3LI83 254 aa14.04□□□□□ -0.16
VPS52-215ENST00000464425 C1orf100Q5SVJ3 147 aa14.04□□□□□ -0.16
VPS52-215ENST00000464425 ELP2Q6IA86 826 aa14.04□□□□□ -0.16
VPS52-215ENST00000464425 TPRA1Q86W33 373 aa14.04□□□□□ -0.16
VPS52-215ENST00000464425 ZNF561Q8N587 486 aa14.04□□□□□ -0.16
VPS52-215ENST00000464425 Q8NFD4 153 aa14.04□□□□□ -0.16
VPS52-215ENST00000464425 TNFAIP8L1Q8WVP5 186 aa14.04□□□□□ -0.16
VPS52-215ENST00000464425 TMEM158Q8WZ71 300 aa14.04□□□□□ -0.16
VPS52-215ENST00000464425 KCTD7Q96MP8 289 aa14.04□□□□□ -0.16
VPS52-215ENST00000464425 FUNDC2Q9BWH2 189 aa14.04□□□□□ -0.16
VPS52-215ENST00000464425 SIRPDQ9H106 197 aa14.04□□□□□ -0.16
VPS52-215ENST00000464425 IL36GQ9NZH8 169 aa14.04□□□□□ -0.16
VPS52-215ENST00000464425 IL36RNQ9UBH0 155 aa14.04□□□□□ -0.16
VPS52-215ENST00000464425 COL6A5A8TX70 2615 aa14.04□□□□□ -0.16
VPS52-215ENST00000464425 LOC100506127A0A0U1RQW1 187 aa14.03□□□□□ -0.16
VPS52-215ENST00000464425 A0A1W2PQ09 198 aa14.03□□□□□ -0.16
VPS52-215ENST00000464425 AIREO43918 545 aa14.03□□□□□ -0.16
VPS52-215ENST00000464425 DUSP1P28562 367 aa14.03□□□□□ -0.16
VPS52-215ENST00000464425 RANBP1P43487 201 aa14.03□□□□□ -0.16
VPS52-215ENST00000464425 OR3A4PP47883 348 aa14.03□□□□□ -0.16
VPS52-215ENST00000464425 MTNR1BP49286 362 aa14.03□□□□□ -0.16
VPS52-215ENST00000464425 BMXP51813 675 aa14.03□□□□□ -0.16
VPS52-215ENST00000464425 PRB3Q04118 309 aaPredicted RBP14.03□□□□□ -0.16
VPS52-215ENST00000464425 BRD3OSQ6XYD6 125 aa14.03□□□□□ -0.16
VPS52-215ENST00000464425 GPR141Q7Z602 305 aa14.03□□□□□ -0.16
VPS52-215ENST00000464425 FAM58AQ8N1B3 248 aa14.03□□□□□ -0.16
VPS52-215ENST00000464425 SIGLECL1Q8N7X8 197 aa14.03□□□□□ -0.16
VPS52-215ENST00000464425 C8orf46Q8TAG6 207 aa14.03□□□□□ -0.16
VPS52-215ENST00000464425 GFI1Q99684 422 aa14.03□□□□□ -0.16
VPS52-215ENST00000464425 CENPOQ9BU64 300 aa14.03□□□□□ -0.16
VPS52-215ENST00000464425 SUCNR1Q9BXA5 334 aa14.03□□□□□ -0.16
VPS52-215ENST00000464425 SEBOXQ9HB31 216 aaPredicted RBP14.03□□□□□ -0.16
VPS52-215ENST00000464425 PCDHB16Q9NRJ7 776 aa14.03□□□□□ -0.16
VPS52-215ENST00000464425 GHRLQ9UBU3 117 aa14.03□□□□□ -0.16
VPS52-215ENST00000464425 SHISA3A0PJX4 238 aa14.02□□□□□ -0.17
VPS52-215ENST00000464425 ZNF780AO75290 641 aaPredicted RBP14.02□□□□□ -0.17
VPS52-215ENST00000464425 PRKACAP17612 351 aa14.02□□□□□ -0.17
VPS52-215ENST00000464425 GPR176Q14439 515 aa14.02□□□□□ -0.17
VPS52-215ENST00000464425 RSU1Q15404 277 aa14.02□□□□□ -0.17
VPS52-215ENST00000464425 GPR157Q5UAW9 335 aa14.02□□□□□ -0.17
VPS52-215ENST00000464425 RUSC1-AS1Q66K80 236 aa14.02□□□□□ -0.17
VPS52-215ENST00000464425 VMO1Q7Z5L0 202 aa14.02□□□□□ -0.17
VPS52-215ENST00000464425 ANKRD13BQ86YJ7 626 aa14.02□□□□□ -0.17
VPS52-215ENST00000464425 PDZD9Q8IXQ8 264 aa14.02□□□□□ -0.17
VPS52-215ENST00000464425 FAM185AQ8N0U4 392 aa14.02□□□□□ -0.17
VPS52-215ENST00000464425 ASCC1Q8N9N2 400 aaKnown RBP14.02□□□□□ -0.17
VPS52-215ENST00000464425 OR4M1Q8NGD0 313 aa14.02□□□□□ -0.17
VPS52-215ENST00000464425 TBC1D15Q8TC07 691 aa14.02□□□□□ -0.17
VPS52-215ENST00000464425 LHX4Q969G2 390 aa14.02□□□□□ -0.17
VPS52-215ENST00000464425 S100A13Q99584 98 aa14.02□□□□□ -0.17
VPS52-215ENST00000464425 NKX3-1Q99801 234 aaPredicted RBP14.02□□□□□ -0.17
VPS52-215ENST00000464425 FAM192AQ9GZU8 254 aa14.02□□□□□ -0.17
VPS52-215ENST00000464425 METTL9Q9H1A3 318 aa14.02□□□□□ -0.17
VPS52-215ENST00000464425 HMG20AQ9NP66 347 aa14.02□□□□□ -0.17
VPS52-215ENST00000464425 C19orf12Q9NSK7 152 aa14.02□□□□□ -0.17
VPS52-215ENST00000464425 ING4Q9UNL4 249 aa14.02□□□□□ -0.17
VPS52-215ENST00000464425 AK6Q9Y3D8 172 aaKnown RBP14.02□□□□□ -0.17
VPS52-215ENST00000464425 KPTNQ9Y664 436 aa14.02□□□□□ -0.17
VPS52-215ENST00000464425 V9GY05 133 aa14.02□□□□□ -0.17
VPS52-215ENST00000464425 A0A0A6YYJ9 748 aa14.01□□□□□ -0.17
VPS52-215ENST00000464425 CENPVL3A0A0U1RRI6 287 aa14.01□□□□□ -0.17
VPS52-215ENST00000464425 SLC22A1O15245 554 aa14.01□□□□□ -0.17
VPS52-215ENST00000464425 HAND1O96004 215 aa14.01□□□□□ -0.17
VPS52-215ENST00000464425 TK1P04183 234 aa14.01□□□□□ -0.17
VPS52-215ENST00000464425 CHRM2P08172 466 aa14.01□□□□□ -0.17
VPS52-215ENST00000464425 UBBP0CG47 229 aa14.01□□□□□ -0.17
VPS52-215ENST00000464425 RAB3BP20337 219 aa14.01□□□□□ -0.17
VPS52-215ENST00000464425 CFPP27918 469 aa14.01□□□□□ -0.17
VPS52-215ENST00000464425 DLX1P56177 255 aa14.01□□□□□ -0.17
VPS52-215ENST00000464425 HILS1P60008 231 aa14.01□□□□□ -0.17
VPS52-215ENST00000464425 ZNF146Q15072 292 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms