RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 TMEM219Q86XT9 240 aa15.21■□□□□ 0.03
SF3A1-205ENST00000463818 C1QL4Q86Z23 238 aa15.21■□□□□ 0.03
SF3A1-205ENST00000463818 OR13C3Q8NGS6 347 aa15.21■□□□□ 0.03
SF3A1-205ENST00000463818 OR13C9Q8NGT0 318 aa15.21■□□□□ 0.03
SF3A1-205ENST00000463818 CFHR4Q92496 578 aa15.21■□□□□ 0.03
SF3A1-205ENST00000463818 RDH12Q96NR8 316 aa15.21■□□□□ 0.03
SF3A1-205ENST00000463818 SPACA5Q96QH8 159 aa15.21■□□□□ 0.03
SF3A1-205ENST00000463818 ZNF702PQ9H963 129 aa15.21■□□□□ 0.03
SF3A1-205ENST00000463818 HILPDAQ9Y5L2 63 aa15.21■□□□□ 0.03
SF3A1-205ENST00000463818 MMP23AO75900 390 aa15.2■□□□□ 0.02
SF3A1-205ENST00000463818 MT-ND2P03891 347 aa15.2■□□□□ 0.02
SF3A1-205ENST00000463818 GABRB1P18505 474 aa15.2■□□□□ 0.02
SF3A1-205ENST00000463818 P2RX3P56373 397 aa15.2■□□□□ 0.02
SF3A1-205ENST00000463818 GALEQ14376 348 aa15.2■□□□□ 0.02
SF3A1-205ENST00000463818 HABP2Q14520 560 aaPredicted RBP15.2■□□□□ 0.02
SF3A1-205ENST00000463818 MINOS1Q5TGZ0 78 aa15.2■□□□□ 0.02
SF3A1-205ENST00000463818 RHOXF1Q8NHV9 184 aa15.2■□□□□ 0.02
SF3A1-205ENST00000463818 MRPL48Q96GC5 212 aaKnown RBP15.2■□□□□ 0.02
SF3A1-205ENST00000463818 SLC29A1Q99808 456 aa15.2■□□□□ 0.02
SF3A1-205ENST00000463818 TMEM133Q9H2Q1 129 aa15.2■□□□□ 0.02
SF3A1-205ENST00000463818 ZCCHC4Q9H5U6 513 aa15.2■□□□□ 0.02
SF3A1-205ENST00000463818 AMBNQ9NP70 447 aa15.2■□□□□ 0.02
SF3A1-205ENST00000463818 EXOSC4Q9NPD3 245 aaKnown RBP15.2■□□□□ 0.02
SF3A1-205ENST00000463818 C8orf4Q9NR00 106 aa15.2■□□□□ 0.02
SF3A1-205ENST00000463818 PITPNC1Q9UKF7 332 aa15.2■□□□□ 0.02
SF3A1-205ENST00000463818 MYRFQ9Y2G1 1151 aa15.2■□□□□ 0.02
SF3A1-205ENST00000463818 MINOS1-NBL1R4GNA1 71 aa15.2■□□□□ 0.02
SF3A1-205ENST00000463818 IGHV2-26A0A0B4J1V2 119 aa15.19■□□□□ 0.02
SF3A1-205ENST00000463818 KDM4BO94953 1096 aa15.19■□□□□ 0.02
SF3A1-205ENST00000463818 OR2H2O95918 312 aa15.19■□□□□ 0.02
SF3A1-205ENST00000463818 JUNBP17275 347 aaPredicted RBP15.19■□□□□ 0.02
SF3A1-205ENST00000463818 DYNLT3P51808 116 aa15.19■□□□□ 0.02
SF3A1-205ENST00000463818 TRAPPC6BQ86SZ2 158 aa15.19■□□□□ 0.02
SF3A1-205ENST00000463818 OR5D18Q8NGL1 313 aa15.19■□□□□ 0.02
SF3A1-205ENST00000463818 NDNFQ8TB73 568 aa15.19■□□□□ 0.02
SF3A1-205ENST00000463818 MYCBPQ99417 103 aaPredicted RBP15.19■□□□□ 0.02
SF3A1-205ENST00000463818 ALG8Q9BVK2 526 aa15.19■□□□□ 0.02
SF3A1-205ENST00000463818 ISG20L2Q9H9L3 353 aaKnown RBP15.19■□□□□ 0.02
SF3A1-205ENST00000463818 UBE2J1Q9Y385 318 aaPredicted RBP15.19■□□□□ 0.02
SF3A1-205ENST00000463818 DBTP11182 482 aaKnown RBP15.18■□□□□ 0.02
SF3A1-205ENST00000463818 LMO1P25800 156 aa15.18■□□□□ 0.02
SF3A1-205ENST00000463818 SLC34A1Q06495 639 aa15.18■□□□□ 0.02
SF3A1-205ENST00000463818 SCN1BQ07699 218 aa15.18■□□□□ 0.02
SF3A1-205ENST00000463818 ZBTB49Q6ZSB9 765 aa15.18■□□□□ 0.02
SF3A1-205ENST00000463818 Q8N2B8 174 aa15.18■□□□□ 0.02
SF3A1-205ENST00000463818 SYS1Q8N2H4 156 aa15.18■□□□□ 0.02
SF3A1-205ENST00000463818 Q96MT0 163 aa15.18■□□□□ 0.02
SF3A1-205ENST00000463818 CLEC7AQ9BXN2 247 aa15.18■□□□□ 0.02
SF3A1-205ENST00000463818 COMMD4Q9H0A8 199 aa15.18■□□□□ 0.02
SF3A1-205ENST00000463818 NEK6Q9HC98 313 aa15.18■□□□□ 0.02
SF3A1-205ENST00000463818 SERTAD4Q9NUC0 356 aa15.18■□□□□ 0.02
SF3A1-205ENST00000463818 TRGV10A0A0A0MS01 117 aa15.17■□□□□ 0.02
SF3A1-205ENST00000463818 A0A0G2JK05 382 aa15.17■□□□□ 0.02
SF3A1-205ENST00000463818 FUOMA2VDF0 154 aa15.17■□□□□ 0.02
SF3A1-205ENST00000463818 E9PI62 339 aa15.17■□□□□ 0.02
SF3A1-205ENST00000463818 CASQ2O14958 399 aaPredicted RBP15.17■□□□□ 0.02
SF3A1-205ENST00000463818 MPZL2O60487 215 aa15.17■□□□□ 0.02
SF3A1-205ENST00000463818 FADS2O95864 444 aaKnown RBP15.17■□□□□ 0.02
SF3A1-205ENST00000463818 GLIPR1P48060 266 aa15.17■□□□□ 0.02
SF3A1-205ENST00000463818 AESQ08117 197 aa15.17■□□□□ 0.02
SF3A1-205ENST00000463818 RCN1Q15293 331 aa15.17■□□□□ 0.02
SF3A1-205ENST00000463818 BAIAP2L2Q6UXY1 529 aa15.17■□□□□ 0.02
SF3A1-205ENST00000463818 SAXO1Q8IYX7 474 aa15.17■□□□□ 0.02
SF3A1-205ENST00000463818 ABHD12Q8N2K0 398 aa15.17■□□□□ 0.02
SF3A1-205ENST00000463818 PACRGLQ8N7B6 248 aa15.17■□□□□ 0.02
SF3A1-205ENST00000463818 OR5D14Q8NGL3 314 aa15.17■□□□□ 0.02
SF3A1-205ENST00000463818 CORO2AQ92828 525 aa15.17■□□□□ 0.02
SF3A1-205ENST00000463818 ZNF649Q9BS31 505 aa15.17■□□□□ 0.02
SF3A1-205ENST00000463818 PRSS22Q9GZN4 317 aa15.17■□□□□ 0.02
SF3A1-205ENST00000463818 RHOFQ9HBH0 211 aa15.17■□□□□ 0.02
SF3A1-205ENST00000463818 ERVK13-1Q9NX77 482 aa15.17■□□□□ 0.02
SF3A1-205ENST00000463818 PCDHGB5Q9Y5G0 923 aa15.17■□□□□ 0.02
SF3A1-205ENST00000463818 LOC100130705A0A1B0GUX0 176 aa15.16■□□□□ 0.02
SF3A1-205ENST00000463818 ANKRD65E5RJM6 399 aa15.16■□□□□ 0.02
SF3A1-205ENST00000463818 F2RL2O00254 374 aa15.16■□□□□ 0.02
SF3A1-205ENST00000463818 ALX3O95076 343 aa15.16■□□□□ 0.02
SF3A1-205ENST00000463818 ZFPL1O95159 310 aa15.16■□□□□ 0.02
SF3A1-205ENST00000463818 TMEM225BP0DP42 221 aa15.16■□□□□ 0.02
SF3A1-205ENST00000463818 ZNF44P15621 663 aa15.16■□□□□ 0.02
SF3A1-205ENST00000463818 HTR1DP28221 377 aa15.16■□□□□ 0.02
SF3A1-205ENST00000463818 BLCAPP62952 87 aa15.16■□□□□ 0.02
SF3A1-205ENST00000463818 PRAMEF5Q5TYX0 476 aa15.16■□□□□ 0.02
SF3A1-205ENST00000463818 OR52W1Q6IF63 320 aa15.16■□□□□ 0.02
SF3A1-205ENST00000463818 Q6P435 159 aa15.16■□□□□ 0.02
SF3A1-205ENST00000463818 Q6ZS46 218 aa15.16■□□□□ 0.02
SF3A1-205ENST00000463818 SERPINA12Q8IW75 414 aa15.16■□□□□ 0.02
SF3A1-205ENST00000463818 LYG1Q8N1E2 194 aa15.16■□□□□ 0.02
SF3A1-205ENST00000463818 TAS2R3Q9NYW6 316 aa15.16■□□□□ 0.02
SF3A1-205ENST00000463818 FAM90A22PA8MWA6 464 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 H3BUI4 141 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 DEGS1O15121 323 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 BAG2O95816 211 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 OPN1MWP04001 364 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 HCKP08631 526 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 RPSAP08865 295 aaKnown RBP15.15■□□□□ 0.02
SF3A1-205ENST00000463818 OPN1MW2P0DN77 364 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 OPN1MW3P0DN78 364 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 CD28P10747 220 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 CDK2P24941 298 aa15.15■□□□□ 0.02
SF3A1-205ENST00000463818 GBX2P52951 348 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms