RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 AKIP1Q9NQ31 210 aa11.99□□□□□ -0.49
COL6A1-202ENST00000463060 DIABLOQ9NR28 239 aa11.99□□□□□ -0.49
COL6A1-202ENST00000463060 ADAM30Q9UKF2 790 aa11.99□□□□□ -0.49
COL6A1-202ENST00000463060 V9GYH0 126 aa11.99□□□□□ -0.49
COL6A1-202ENST00000463060 PDZD2O15018 2839 aa11.99□□□□□ -0.49
COL6A1-202ENST00000463060 ARID1AO14497 2285 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 TRAV38-1A0A0B4J264 116 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 FAM25AB3EWG3 89 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 FAM25CB3EWG5 89 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 FAM25GB3EWG6 89 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 CLDN25C9JDP6 229 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 PDCD6O75340 191 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 ZNF737O75373 536 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 TFF1P04155 84 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 MELTFP08582 738 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 GABRR1P24046 479 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 BLVRBP30043 206 aaPredicted RBP11.98□□□□□ -0.49
COL6A1-202ENST00000463060 CEBPDP49716 269 aaPredicted RBP11.98□□□□□ -0.49
COL6A1-202ENST00000463060 SNU13P55769 128 aaKnown RBP11.98□□□□□ -0.49
COL6A1-202ENST00000463060 ATP5J2P56134 94 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 BTG1P62324 171 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 FIP1L1Q6UN15 594 aaKnown RBP11.98□□□□□ -0.49
COL6A1-202ENST00000463060 Q6ZTK2 550 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 ZNF525Q8N782 197 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 DTX3Q8N9I9 347 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 DEFB108BQ8NET1 73 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 ST8SIA4Q92187 359 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 LURAP1Q96LR2 239 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 ABHD1Q96SE0 405 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 TMEM246Q9BRR3 403 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 PECRQ9BY49 303 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 KAAG1Q9UBP8 84 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 EXTL2Q9UBQ6 330 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 DNAJB11Q9UBS4 358 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 METRNQ9UJH8 293 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 EDARQ9UNE0 448 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 MAB21L2Q9Y586 359 aa11.98□□□□□ -0.49
COL6A1-202ENST00000463060 ITPR2Q14571 2701 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 TRAV18A0A075B6X5 111 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 TMEM82A0PJX8 343 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 H3BUI4 141 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 SLC33A1O00400 549 aaPredicted RBP11.97□□□□□ -0.49
COL6A1-202ENST00000463060 MFNGO00587 321 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 DEGS1O15121 323 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 SSX4O60224 188 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 PSPNO60542 156 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 FCN3O75636 299 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 OR7C1O76099 320 aaPredicted RBP11.97□□□□□ -0.49
COL6A1-202ENST00000463060 HIST1H1DP16402 221 aaKnown RBP11.97□□□□□ -0.49
COL6A1-202ENST00000463060 PTBP1P26599 531 aaKnown RBP eCLIP11.97□□□□□ -0.49
COL6A1-202ENST00000463060 TAS2R20P59543 309 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 IKZF1Q13422 519 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 DEFB113Q30KQ7 82 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 CDNFQ49AH0 187 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 C17orf107Q6ZR85 190 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 LRRC75A-AS1Q8N1F1 130 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 CHST4Q8NCG5 386 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 RAB1CQ92928 201 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 NINJ1Q92982 152 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 RAB3CQ96E17 227 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 ARHGAP5-AS1Q96IT6 56 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 GAFA1Q96PS6 74 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 SULT4A1Q9BR01 284 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 SHARPINQ9H0F6 387 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 AUNIPQ9H7T9 357 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 SPACA1Q9HBV2 294 aa11.97□□□□□ -0.49
COL6A1-202ENST00000463060 A0A0G2JMP0 313 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 A0A0X1KG70 313 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 FABP12A6NFH5 140 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 VWC2LB2RUY7 222 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 PPIHO43447 177 aaKnown RBP11.96□□□□□ -0.49
COL6A1-202ENST00000463060 NDUFA2O43678 99 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 CA11O75493 328 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 GYPAP02724 150 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 DNASE1P24855 282 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 MDH2P40926 338 aaKnown RBP11.96□□□□□ -0.49
COL6A1-202ENST00000463060 NR4A2P43354 598 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 ZNF45Q02386 682 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 COL10A1Q03692 680 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 ZNF79Q15937 498 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 TMEM155Q4W5P6 130 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 TMEM69Q5SWH9 247 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 SHEQ5VZ18 495 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 OLFML2AQ68BL7 652 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 BRICD5Q6PL45 260 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 LYPD2Q6UXB3 125 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 BAIAP2L2Q6UXY1 529 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 C6orf201Q7Z4U5 140 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 IZUMO1Q8IYV9 350 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 SUMF2Q8NBJ7 301 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 OR4M2Q8NGB6 313 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 PERPQ96FX8 193 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 NEDD4LQ96PU5 975 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 CCL13Q99616 98 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 FAAP24Q9BTP7 215 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 PLEKHJ1Q9NW61 149 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 RABL2AQ9UBK7 228 aaPredicted RBP11.96□□□□□ -0.49
COL6A1-202ENST00000463060 OR14J1Q9UGF5 321 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 GLS2Q9UI32 602 aa11.96□□□□□ -0.49
COL6A1-202ENST00000463060 ELF5Q9UKW6 265 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms