RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 SSX2Q16385 188 aa15.31■□□□□ 0.04
VARS-220ENST00000461874 PLA1AQ53H76 456 aa15.31■□□□□ 0.04
VARS-220ENST00000461874 SAXO1Q8IYX7 474 aa15.31■□□□□ 0.04
VARS-220ENST00000461874 CDCA4Q9BXL8 241 aa15.31■□□□□ 0.04
VARS-220ENST00000461874 NPFFR1Q9GZQ6 430 aa15.31■□□□□ 0.04
VARS-220ENST00000461874 GSTK1Q9Y2Q3 226 aa15.31■□□□□ 0.04
VARS-220ENST00000461874 SESN1Q9Y6P5 492 aa15.31■□□□□ 0.04
VARS-220ENST00000461874 DSCAML1Q8TD84 2053 aa15.31■□□□□ 0.04
VARS-220ENST00000461874 TMEM212A6NML5 194 aa15.3■□□□□ 0.04
VARS-220ENST00000461874 E9PI62 339 aa15.3■□□□□ 0.04
VARS-220ENST00000461874 SIRPB1O00241 398 aa15.3■□□□□ 0.04
VARS-220ENST00000461874 EBAG9O00559 213 aa15.3■□□□□ 0.04
VARS-220ENST00000461874 TSPAN15O95858 294 aa15.3■□□□□ 0.04
VARS-220ENST00000461874 OR2H2O95918 312 aa15.3■□□□□ 0.04
VARS-220ENST00000461874 P2RX3P56373 397 aa15.3■□□□□ 0.04
VARS-220ENST00000461874 HERPUD1Q15011 391 aa15.3■□□□□ 0.04
VARS-220ENST00000461874 FAM189A2Q15884 450 aa15.3■□□□□ 0.04
VARS-220ENST00000461874 OR52I1Q8NGK6 324 aa15.3■□□□□ 0.04
VARS-220ENST00000461874 OR5D18Q8NGL1 313 aa15.3■□□□□ 0.04
VARS-220ENST00000461874 OR2T6Q8NHC8 308 aa15.3■□□□□ 0.04
VARS-220ENST00000461874 APH1BQ8WW43 257 aa15.3■□□□□ 0.04
VARS-220ENST00000461874 RHOFQ9HBH0 211 aa15.3■□□□□ 0.04
VARS-220ENST00000461874 NEK6Q9HC98 313 aa15.3■□□□□ 0.04
VARS-220ENST00000461874 EXOSC4Q9NPD3 245 aaKnown RBP15.3■□□□□ 0.04
VARS-220ENST00000461874 TCF19Q9Y242 345 aa15.3■□□□□ 0.04
VARS-220ENST00000461874 UBE2J1Q9Y385 318 aaPredicted RBP15.3■□□□□ 0.04
VARS-220ENST00000461874 RPL36Q9Y3U8 105 aaKnown RBP15.3■□□□□ 0.04
VARS-220ENST00000461874 A6NDX4 124 aa15.29■□□□□ 0.04
VARS-220ENST00000461874 LMO1P25800 156 aa15.29■□□□□ 0.04
VARS-220ENST00000461874 C2orf68Q2NKX9 166 aa15.29■□□□□ 0.04
VARS-220ENST00000461874 MINOS1Q5TGZ0 78 aa15.29■□□□□ 0.04
VARS-220ENST00000461874 CCBE1Q6UXH8 406 aaPredicted RBP15.29■□□□□ 0.04
VARS-220ENST00000461874 Q6ZTK2 550 aa15.29■□□□□ 0.04
VARS-220ENST00000461874 SERPINA12Q8IW75 414 aa15.29■□□□□ 0.04
VARS-220ENST00000461874 PARP16Q8N5Y8 322 aa15.29■□□□□ 0.04
VARS-220ENST00000461874 DTX3Q8N9I9 347 aa15.29■□□□□ 0.04
VARS-220ENST00000461874 OR5D14Q8NGL3 314 aa15.29■□□□□ 0.04
VARS-220ENST00000461874 OR5AK2Q8NH90 309 aa15.29■□□□□ 0.04
VARS-220ENST00000461874 RPS4Y2Q8TD47 263 aa15.29■□□□□ 0.04
VARS-220ENST00000461874 PDCD1LG2Q9BQ51 273 aa15.29■□□□□ 0.04
VARS-220ENST00000461874 COMMD4Q9H0A8 199 aa15.29■□□□□ 0.04
VARS-220ENST00000461874 TMEM133Q9H2Q1 129 aa15.29■□□□□ 0.04
VARS-220ENST00000461874 ABCB10Q9NRK6 738 aa15.29■□□□□ 0.04
VARS-220ENST00000461874 PCDHGB5Q9Y5G0 923 aa15.29■□□□□ 0.04
VARS-220ENST00000461874 MINOS1-NBL1R4GNA1 71 aa15.29■□□□□ 0.04
VARS-220ENST00000461874 IGHV2-26A0A0B4J1V2 119 aa15.28■□□□□ 0.04
VARS-220ENST00000461874 SULT1B1O43704 296 aa15.28■□□□□ 0.04
VARS-220ENST00000461874 MMP23AO75900 390 aa15.28■□□□□ 0.04
VARS-220ENST00000461874 CCDC159P0C7I6 412 aa15.28■□□□□ 0.04
VARS-220ENST00000461874 DYNLT3P51808 116 aa15.28■□□□□ 0.04
VARS-220ENST00000461874 GBX2P52951 348 aaPredicted RBP15.28■□□□□ 0.04
VARS-220ENST00000461874 ZP1P60852 638 aa15.28■□□□□ 0.04
VARS-220ENST00000461874 KISS1Q15726 138 aa15.28■□□□□ 0.04
VARS-220ENST00000461874 KLHL22Q53GT1 634 aa15.28■□□□□ 0.04
VARS-220ENST00000461874 TRAPPC6BQ86SZ2 158 aa15.28■□□□□ 0.04
VARS-220ENST00000461874 NKX3-1Q99801 234 aaPredicted RBP15.28■□□□□ 0.04
VARS-220ENST00000461874 CLEC7AQ9BXN2 247 aa15.28■□□□□ 0.04
VARS-220ENST00000461874 FOXJ3Q9UPW0 622 aa15.28■□□□□ 0.04
VARS-220ENST00000461874 DHDHQ9UQ10 334 aa15.28■□□□□ 0.04
VARS-220ENST00000461874 A0A0G2JK05 382 aa15.27■□□□□ 0.04
VARS-220ENST00000461874 FUOMA2VDF0 154 aa15.27■□□□□ 0.04
VARS-220ENST00000461874 BAG2O95816 211 aa15.27■□□□□ 0.04
VARS-220ENST00000461874 HCKP08631 526 aa15.27■□□□□ 0.04
VARS-220ENST00000461874 LIMS3P0CW19 117 aa15.27■□□□□ 0.04
VARS-220ENST00000461874 LIMS4P0CW20 117 aa15.27■□□□□ 0.04
VARS-220ENST00000461874 TMEM225BP0DP42 221 aa15.27■□□□□ 0.04
VARS-220ENST00000461874 PDLIM3Q53GG5 364 aaPredicted RBP15.27■□□□□ 0.04
VARS-220ENST00000461874 LPCAT4Q643R3 524 aa15.27■□□□□ 0.04
VARS-220ENST00000461874 Q6P435 159 aa15.27■□□□□ 0.04
VARS-220ENST00000461874 TMEM219Q86XT9 240 aa15.27■□□□□ 0.04
VARS-220ENST00000461874 Q8N2B8 174 aa15.27■□□□□ 0.04
VARS-220ENST00000461874 KLHDC1Q8N7A1 406 aa15.27■□□□□ 0.04
VARS-220ENST00000461874 CHST4Q8NCG5 386 aa15.27■□□□□ 0.04
VARS-220ENST00000461874 FAM110DQ8TAY7 271 aaPredicted RBP15.27■□□□□ 0.04
VARS-220ENST00000461874 HAVCR2Q8TDQ0 301 aa15.27■□□□□ 0.04
VARS-220ENST00000461874 CFHR4Q92496 578 aa15.27■□□□□ 0.04
VARS-220ENST00000461874 CORO2AQ92828 525 aa15.27■□□□□ 0.04
VARS-220ENST00000461874 JAM3Q9BX67 310 aa15.27■□□□□ 0.04
VARS-220ENST00000461874 ZNF702PQ9H963 129 aa15.27■□□□□ 0.04
VARS-220ENST00000461874 PITPNC1Q9UKF7 332 aa15.27■□□□□ 0.04
VARS-220ENST00000461874 HILPDAQ9Y5L2 63 aa15.27■□□□□ 0.04
VARS-220ENST00000461874 TRGV10A0A0A0MS01 117 aa15.26■□□□□ 0.03
VARS-220ENST00000461874 WBP4O75554 376 aaKnown RBP15.26■□□□□ 0.03
VARS-220ENST00000461874 CSF1P09603 554 aa15.26■□□□□ 0.03
VARS-220ENST00000461874 ZNF44P15621 663 aa15.26■□□□□ 0.03
VARS-220ENST00000461874 JUNBP17275 347 aaPredicted RBP15.26■□□□□ 0.03
VARS-220ENST00000461874 GLIPR1P48060 266 aa15.26■□□□□ 0.03
VARS-220ENST00000461874 GTF2A1P52655 376 aaPredicted RBP15.26■□□□□ 0.03
VARS-220ENST00000461874 SCN1BQ07699 218 aa15.26■□□□□ 0.03
VARS-220ENST00000461874 AESQ08117 197 aa15.26■□□□□ 0.03
VARS-220ENST00000461874 IL18R1Q13478 541 aa15.26■□□□□ 0.03
VARS-220ENST00000461874 ZNF555Q8NEP9 628 aa15.26■□□□□ 0.03
VARS-220ENST00000461874 NDNFQ8TB73 568 aa15.26■□□□□ 0.03
VARS-220ENST00000461874 TSEN15Q8WW01 171 aaKnown RBP15.26■□□□□ 0.03
VARS-220ENST00000461874 RDH12Q96NR8 316 aa15.26■□□□□ 0.03
VARS-220ENST00000461874 GAL3ST2Q9H3Q3 398 aa15.26■□□□□ 0.03
VARS-220ENST00000461874 FGF20Q9NP95 211 aaPredicted RBP15.26■□□□□ 0.03
VARS-220ENST00000461874 SMPD3Q9NY59 655 aaPredicted RBP15.26■□□□□ 0.03
VARS-220ENST00000461874 TAS2R3Q9NYW6 316 aa15.26■□□□□ 0.03
VARS-220ENST00000461874 SLC33A1O00400 549 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms