RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 BAK1Q16611 211 aa12.8□□□□□ -0.36
TMEM39A-203ENST00000461654 SWI5Q1ZZU3 235 aa12.8□□□□□ -0.36
TMEM39A-203ENST00000461654 SMIM21Q3B7S5 101 aa12.8□□□□□ -0.36
TMEM39A-203ENST00000461654 SPIN3Q5JUX0 258 aa12.8□□□□□ -0.36
TMEM39A-203ENST00000461654 ATAD3CQ5T2N8 411 aa12.8□□□□□ -0.36
TMEM39A-203ENST00000461654 ZNF57Q68EA5 555 aaPredicted RBP12.8□□□□□ -0.36
TMEM39A-203ENST00000461654 C11orf53Q8IXP5 236 aa12.8□□□□□ -0.36
TMEM39A-203ENST00000461654 ARHGAP5-AS1Q96IT6 56 aa12.8□□□□□ -0.36
TMEM39A-203ENST00000461654 ZMAT3Q9HA38 289 aaKnown RBP12.8□□□□□ -0.36
TMEM39A-203ENST00000461654 SAP30LQ9HAJ7 183 aa12.8□□□□□ -0.36
TMEM39A-203ENST00000461654 CBLN4Q9NTU7 201 aa12.8□□□□□ -0.36
TMEM39A-203ENST00000461654 RNF7Q9UBF6 113 aa12.8□□□□□ -0.36
TMEM39A-203ENST00000461654 HSF4Q9ULV5 492 aa12.8□□□□□ -0.36
TMEM39A-203ENST00000461654 PPP1R3CQ9UQK1 317 aa12.8□□□□□ -0.36
TMEM39A-203ENST00000461654 C2CD3Q4AC94 2353 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 A0A1W2PQ09 198 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 SERPINE3A8MV23 424 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 F8VVB4 439 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 F8VWA3 439 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 SH2D1BO14796 132 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 PDCD6O75340 191 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 LPLP06858 475 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 GNB3P16520 340 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 HOXB4P17483 251 aaPredicted RBP12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 FUT3P21217 361 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 CFHR2P36980 270 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 PPOXP50336 477 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 AP3S2P59780 193 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 ACTBP60709 375 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 GMFBP60983 142 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 ACTG1P63261 375 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 DGCR2P98153 550 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 SSBP1Q04837 148 aaKnown RBP12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 MST1LQ2TV78 715 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 ZNF260Q3ZCT1 412 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 STEAP3Q658P3 488 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 DTX2Q86UW9 622 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 LYSMD2Q8IV50 215 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 OR52I2Q8NH67 350 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 VRK1Q99986 396 aaPredicted RBP12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 PECRQ9BY49 303 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 RAB1BQ9H0U4 201 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 GCM1Q9NP62 436 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 TAS2R8Q9NYW2 309 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 ACANP16112 2415 aa12.79□□□□□ -0.36
TMEM39A-203ENST00000461654 TMEM235A6NFC5 223 aa12.78□□□□□ -0.36
TMEM39A-203ENST00000461654 FOXI3A8MTJ6 420 aaPredicted RBP12.78□□□□□ -0.36
TMEM39A-203ENST00000461654 IFNL4K9M1U5 179 aa12.78□□□□□ -0.36
TMEM39A-203ENST00000461654 DEGS1O15121 323 aa12.78□□□□□ -0.36
TMEM39A-203ENST00000461654 ECDO95905 644 aaPredicted RBP12.78□□□□□ -0.36
TMEM39A-203ENST00000461654 MELTFP08582 738 aa12.78□□□□□ -0.36
TMEM39A-203ENST00000461654 CD3GP09693 182 aa12.78□□□□□ -0.36
TMEM39A-203ENST00000461654 PTHLHP12272 177 aa12.78□□□□□ -0.36
TMEM39A-203ENST00000461654 ATP5J2P56134 94 aa12.78□□□□□ -0.36
TMEM39A-203ENST00000461654 TMEM50BP56557 158 aa12.78□□□□□ -0.36
TMEM39A-203ENST00000461654 RGS21Q2M5E4 152 aa12.78□□□□□ -0.36
TMEM39A-203ENST00000461654 PLAC9Q5JTB6 97 aa12.78□□□□□ -0.36
TMEM39A-203ENST00000461654 FAM90A1Q86YD7 464 aa12.78□□□□□ -0.36
TMEM39A-203ENST00000461654 C1orf87Q8N0U7 546 aa12.78□□□□□ -0.36
TMEM39A-203ENST00000461654 CIARTQ8N365 385 aaPredicted RBP12.78□□□□□ -0.36
TMEM39A-203ENST00000461654 TOMM5Q8N4H5 51 aa12.78□□□□□ -0.36
TMEM39A-203ENST00000461654 BOLLQ8N9W6 283 aaKnown RBP12.78□□□□□ -0.36
TMEM39A-203ENST00000461654 SETD6Q8TBK2 473 aa12.78□□□□□ -0.36
TMEM39A-203ENST00000461654 Q8TCH9 128 aa12.78□□□□□ -0.36
TMEM39A-203ENST00000461654 GCDHQ92947 438 aaPredicted RBP12.78□□□□□ -0.36
TMEM39A-203ENST00000461654 YIPF5Q969M3 257 aa12.78□□□□□ -0.36
TMEM39A-203ENST00000461654 SMR3AQ99954 134 aa12.78□□□□□ -0.36
TMEM39A-203ENST00000461654 DNAJB11Q9UBS4 358 aa12.78□□□□□ -0.36
TMEM39A-203ENST00000461654 NPTNQ9Y639 398 aa12.78□□□□□ -0.36
TMEM39A-203ENST00000461654 LINC00854A0A1B0GVQ3 168 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 CENPXA8MT69 81 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 SRRM5B3KS81 715 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 MCRIP1C9JLW8 97 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 H7C1Q1 480 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 H7C417 338 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 MFNGO00587 321 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 CA11O75493 328 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 KNG1P01042 644 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 CD8AP01732 235 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 HEXAP06865 529 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 ZNF44P15621 663 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 CHATP28329 748 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 DUSP1P28562 367 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 PMELP40967 661 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 CBX5P45973 191 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 RBM39Q14498 530 aaKnown RBP12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 MZT2BQ6NZ67 158 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 ACP7Q6ZNF0 438 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 C6orf201Q7Z4U5 140 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 TRAPPC6BQ86SZ2 158 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 ZCCHC24Q8N2G6 241 aaKnown RBP12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 POC5Q8NA72 575 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 NEK7Q8TDX7 302 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 GPX8Q8TED1 209 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 SEH1LQ96EE3 360 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 TRAF4Q9BUZ4 470 aaPredicted RBP12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 HES4Q9HCC6 221 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 IFT46Q9NQC8 304 aa12.77□□□□□ -0.37
TMEM39A-203ENST00000461654 MTFP1Q9UDX5 166 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms