RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 CCDC120Q96HB5 630 aa17.28■□□□□ 0.36
CCM2-203ENST00000461377 VRK1Q99986 396 aaPredicted RBP17.28■□□□□ 0.36
CCM2-203ENST00000461377 CNOT1A5YKK6 2376 aaKnown RBP17.27■□□□□ 0.36
CCM2-203ENST00000461377 MPTX1A8MV57 137 aa17.27■□□□□ 0.36
CCM2-203ENST00000461377 J3QT63 122 aa17.27■□□□□ 0.36
CCM2-203ENST00000461377 BCL2L11O43521 198 aa17.27■□□□□ 0.36
CCM2-203ENST00000461377 ZNF205O95201 554 aa17.27■□□□□ 0.36
CCM2-203ENST00000461377 RBMXP38159 391 aaKnown RBP17.27■□□□□ 0.36
CCM2-203ENST00000461377 GLP1RP43220 463 aa17.27■□□□□ 0.36
CCM2-203ENST00000461377 ERVS71-1P61550 626 aa17.27■□□□□ 0.36
CCM2-203ENST00000461377 IL13RA2Q14627 380 aa17.27■□□□□ 0.36
CCM2-203ENST00000461377 ZNF585AQ6P3V2 769 aa17.27■□□□□ 0.36
CCM2-203ENST00000461377 Q6ZS92 163 aa17.27■□□□□ 0.36
CCM2-203ENST00000461377 TOMM40LQ969M1 308 aa17.27■□□□□ 0.36
CCM2-203ENST00000461377 MOB3AQ96BX8 217 aa17.27■□□□□ 0.36
CCM2-203ENST00000461377 PIK3IP1Q96FE7 263 aa17.27■□□□□ 0.36
CCM2-203ENST00000461377 ZNF488Q96MN9 340 aa17.27■□□□□ 0.36
CCM2-203ENST00000461377 MICU1Q9BPX6 476 aa17.27■□□□□ 0.36
CCM2-203ENST00000461377 RTL8AQ9BWD3 113 aa17.27■□□□□ 0.36
CCM2-203ENST00000461377 METTL8Q9H825 291 aaKnown RBP17.27■□□□□ 0.36
CCM2-203ENST00000461377 C1orf123Q9NWV4 160 aa17.27■□□□□ 0.36
CCM2-203ENST00000461377 DMXL1Q9Y485 3027 aa17.26■□□□□ 0.35
CCM2-203ENST00000461377 FAM186AA6NE01 2351 aa17.26■□□□□ 0.35
CCM2-203ENST00000461377 IGKV3-15P01624 115 aa17.26■□□□□ 0.35
CCM2-203ENST00000461377 RAC2P15153 192 aa17.26■□□□□ 0.35
CCM2-203ENST00000461377 EIF2S3P41091 472 aaKnown RBP17.26■□□□□ 0.35
CCM2-203ENST00000461377 UCP3P55916 312 aa17.26■□□□□ 0.35
CCM2-203ENST00000461377 UBA52P62987 128 aaKnown RBP17.26■□□□□ 0.35
CCM2-203ENST00000461377 POC1AQ8NBT0 407 aa17.26■□□□□ 0.35
CCM2-203ENST00000461377 SLC25A40Q8TBP6 338 aa17.26■□□□□ 0.35
CCM2-203ENST00000461377 OR10C1Q96KK4 312 aa17.26■□□□□ 0.35
CCM2-203ENST00000461377 C2orf50Q96LR7 162 aa17.26■□□□□ 0.35
CCM2-203ENST00000461377 Q9N2K0 584 aa17.26■□□□□ 0.35
CCM2-203ENST00000461377 DOCK7Q96N67 2140 aa17.26■□□□□ 0.35
CCM2-203ENST00000461377 TEX13DA0A0J9YY54 714 aaPredicted RBP17.26■□□□□ 0.35
CCM2-203ENST00000461377 KANTRA0A1W2PQU2 76 aa17.26■□□□□ 0.35
CCM2-203ENST00000461377 TNFSF13O75888 250 aa17.26■□□□□ 0.35
CCM2-203ENST00000461377 SPINK2P20155 84 aa17.26■□□□□ 0.35
CCM2-203ENST00000461377 HOXC12P31275 282 aa17.26■□□□□ 0.35
CCM2-203ENST00000461377 UCP2P55851 309 aa17.26■□□□□ 0.35
CCM2-203ENST00000461377 PIGPP57054 158 aa17.26■□□□□ 0.35
CCM2-203ENST00000461377 COMMD7Q86VX2 200 aa17.26■□□□□ 0.35
CCM2-203ENST00000461377 FAM58AQ8N1B3 248 aa17.26■□□□□ 0.35
CCM2-203ENST00000461377 RNF126Q9BV68 326 aa17.26■□□□□ 0.35
CCM2-203ENST00000461377 SPACA1Q9HBV2 294 aa17.26■□□□□ 0.35
CCM2-203ENST00000461377 H0YIZ8 118 aa17.25■□□□□ 0.35
CCM2-203ENST00000461377 CGAP01215 116 aa17.25■□□□□ 0.35
CCM2-203ENST00000461377 DUSP1P28562 367 aa17.25■□□□□ 0.35
CCM2-203ENST00000461377 FXYD4P59646 89 aa17.25■□□□□ 0.35
CCM2-203ENST00000461377 IL15RAQ13261 267 aa17.25■□□□□ 0.35
CCM2-203ENST00000461377 FAM76BQ5HYJ3 339 aa17.25■□□□□ 0.35
CCM2-203ENST00000461377 WDR86Q86TI4 376 aa17.25■□□□□ 0.35
CCM2-203ENST00000461377 ST8SIA2Q92186 375 aa17.25■□□□□ 0.35
CCM2-203ENST00000461377 NAA60Q9H7X0 242 aa17.25■□□□□ 0.35
CCM2-203ENST00000461377 RHOFQ9HBH0 211 aa17.25■□□□□ 0.35
CCM2-203ENST00000461377 LRP5LA4QPB2 252 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 MBD3L4A6NDZ8 208 aaPredicted RBP17.24■□□□□ 0.35
CCM2-203ENST00000461377 MBD3L3A6NE82 208 aaPredicted RBP17.24■□□□□ 0.35
CCM2-203ENST00000461377 MBD3L5A6NJ08 208 aaPredicted RBP17.24■□□□□ 0.35
CCM2-203ENST00000461377 IQCF6A8MYZ5 107 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 KLK10O43240 276 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 RHBDL1O75783 438 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 SPDEFO95238 335 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 PDGFAP04085 211 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 HOXB5P09067 269 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 RRASP10301 218 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 LYL1P12980 280 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 SELEP16581 610 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 RBM39Q14498 530 aaKnown RBP17.24■□□□□ 0.35
CCM2-203ENST00000461377 IGFBP7Q16270 282 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 SEM1Q6ZVN7 128 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 INO80EQ8NBZ0 244 aaPredicted RBP17.24■□□□□ 0.35
CCM2-203ENST00000461377 OR1J1Q8NGS3 322 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 MBD3L2Q8NHZ7 208 aaPredicted RBP17.24■□□□□ 0.35
CCM2-203ENST00000461377 GTF3AQ92664 365 aaKnown RBP17.24■□□□□ 0.35
CCM2-203ENST00000461377 STARD4Q96DR4 205 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 AGFG2O95081 481 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 NMBP08949 121 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 AADACP22760 399 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 ABCA11PQ4W5N1 156 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 IGSF11Q5DX21 431 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 SLC38A6Q8IZM9 456 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 C17orf78Q8N4C9 275 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 SUMF2Q8NBJ7 301 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 GALNT14Q96FL9 552 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 IFT22Q9H7X7 185 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 PROCRQ9UNN8 238 aa17.24■□□□□ 0.35
CCM2-203ENST00000461377 WDR1O75083 606 aa17.23■□□□□ 0.35
CCM2-203ENST00000461377 GLAP06280 429 aa17.23■□□□□ 0.35
CCM2-203ENST00000461377 HERV-K104P61576 105 aa17.23■□□□□ 0.35
CCM2-203ENST00000461377 PSG7Q13046 419 aa17.23■□□□□ 0.35
CCM2-203ENST00000461377 ALKBH6Q3KRA9 238 aa17.23■□□□□ 0.35
CCM2-203ENST00000461377 BEX5Q5H9J7 111 aa17.23■□□□□ 0.35
CCM2-203ENST00000461377 PRSS54Q6PEW0 395 aa17.23■□□□□ 0.35
CCM2-203ENST00000461377 CXorf67Q86X51 503 aaPredicted RBP17.23■□□□□ 0.35
CCM2-203ENST00000461377 ZNF610Q8N9Z0 462 aa17.23■□□□□ 0.35
CCM2-203ENST00000461377 NEK7Q8TDX7 302 aa17.23■□□□□ 0.35
CCM2-203ENST00000461377 RTN4IP1Q8WWV3 396 aaPredicted RBP17.23■□□□□ 0.35
CCM2-203ENST00000461377 DCUN1D4Q92564 292 aa17.23■□□□□ 0.35
CCM2-203ENST00000461377 ADAT1Q9BUB4 502 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms