RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 ERGIC3Q9Y282 383 aa12.59□□□□□ -0.39
VARS-219ENST00000461328 SF3B6Q9Y3B4 125 aaKnown RBP12.59□□□□□ -0.39
VARS-219ENST00000461328 TMEM82A0PJX8 343 aa12.58□□□□□ -0.4
VARS-219ENST00000461328 BTBD17A6NE02 478 aa12.58□□□□□ -0.4
VARS-219ENST00000461328 POM121CA8CG34 1229 aa12.58□□□□□ -0.4
VARS-219ENST00000461328 IGHV4-59P01825 116 aa12.58□□□□□ -0.4
VARS-219ENST00000461328 C21orf33P30042 268 aaPredicted RBP12.58□□□□□ -0.4
VARS-219ENST00000461328 SAA4P35542 130 aa12.58□□□□□ -0.4
VARS-219ENST00000461328 UBE2E1P51965 193 aa12.58□□□□□ -0.4
VARS-219ENST00000461328 WNT4P56705 351 aa12.58□□□□□ -0.4
VARS-219ENST00000461328 ERVFRD-1P60508 538 aa12.58□□□□□ -0.4
VARS-219ENST00000461328 ZP1P60852 638 aa12.58□□□□□ -0.4
VARS-219ENST00000461328 SCN1BQ07699 218 aa12.58□□□□□ -0.4
VARS-219ENST00000461328 ZNF146Q15072 292 aa12.58□□□□□ -0.4
VARS-219ENST00000461328 YIF1BQ5BJH7 314 aa12.58□□□□□ -0.4
VARS-219ENST00000461328 DDI2Q5TDH0 399 aa12.58□□□□□ -0.4
VARS-219ENST00000461328 DMKNQ6E0U4 476 aaPredicted RBP12.58□□□□□ -0.4
VARS-219ENST00000461328 ZNF782Q6ZMW2 699 aaPredicted RBP12.58□□□□□ -0.4
VARS-219ENST00000461328 LDLRAD3Q86YD5 345 aa12.58□□□□□ -0.4
VARS-219ENST00000461328 OR52N4Q8NGI2 321 aa12.58□□□□□ -0.4
VARS-219ENST00000461328 OR4F5Q8NH21 305 aa12.58□□□□□ -0.4
VARS-219ENST00000461328 TNFRSF14Q92956 283 aa12.58□□□□□ -0.4
VARS-219ENST00000461328 RHOFQ9HBH0 211 aa12.58□□□□□ -0.4
VARS-219ENST00000461328 SCN3BQ9NY72 215 aa12.58□□□□□ -0.4
VARS-219ENST00000461328 hADV38S2A0JD32 116 aa12.57□□□□□ -0.4
VARS-219ENST00000461328 PTGES3LE9PB15 166 aa12.57□□□□□ -0.4
VARS-219ENST00000461328 H0YJX3 145 aa12.57□□□□□ -0.4
VARS-219ENST00000461328 GABRPO00591 440 aa12.57□□□□□ -0.4
VARS-219ENST00000461328 OR2H2O95918 312 aa12.57□□□□□ -0.4
VARS-219ENST00000461328 IER3P46695 156 aa12.57□□□□□ -0.4
VARS-219ENST00000461328 BMXP51813 675 aa12.57□□□□□ -0.4
VARS-219ENST00000461328 RAG2P55895 527 aa12.57□□□□□ -0.4
VARS-219ENST00000461328 ACSM1Q08AH1 577 aa12.57□□□□□ -0.4
VARS-219ENST00000461328 RIPK1Q13546 671 aa12.57□□□□□ -0.4
VARS-219ENST00000461328 RSU1Q15404 277 aa12.57□□□□□ -0.4
VARS-219ENST00000461328 Q499Y3 187 aa12.57□□□□□ -0.4
VARS-219ENST00000461328 C6orf141Q5SZD1 244 aa12.57□□□□□ -0.4
VARS-219ENST00000461328 C17orf107Q6ZR85 190 aa12.57□□□□□ -0.4
VARS-219ENST00000461328 TRAPPC6BQ86SZ2 158 aa12.57□□□□□ -0.4
VARS-219ENST00000461328 TPRX1Q8N7U7 411 aa12.57□□□□□ -0.4
VARS-219ENST00000461328 DYRK2Q92630 601 aa12.57□□□□□ -0.4
VARS-219ENST00000461328 MYDGFQ969H8 173 aa12.57□□□□□ -0.4
VARS-219ENST00000461328 ZNF714Q96N38 554 aa12.57□□□□□ -0.4
VARS-219ENST00000461328 NKX3-1Q99801 234 aaPredicted RBP12.57□□□□□ -0.4
VARS-219ENST00000461328 DPAGT1Q9H3H5 408 aa12.57□□□□□ -0.4
VARS-219ENST00000461328 HEXA-AS1Q9H8Q6 139 aa12.57□□□□□ -0.4
VARS-219ENST00000461328 TMEM138Q9NPI0 162 aa12.57□□□□□ -0.4
VARS-219ENST00000461328 C1RLQ9NZP8 487 aa12.57□□□□□ -0.4
VARS-219ENST00000461328 NBEAL1Q6ZS30 2694 aa12.56□□□□□ -0.4
VARS-219ENST00000461328 MGST3O14880 152 aa12.56□□□□□ -0.4
VARS-219ENST00000461328 PSPNO60542 156 aa12.56□□□□□ -0.4
VARS-219ENST00000461328 CDK1P06493 297 aa12.56□□□□□ -0.4
VARS-219ENST00000461328 ZNF728P0DKX0 622 aa12.56□□□□□ -0.4
VARS-219ENST00000461328 CELP19835 753 aa12.56□□□□□ -0.4
VARS-219ENST00000461328 BDKRB2P30411 391 aa12.56□□□□□ -0.4
VARS-219ENST00000461328 OR3A1P47881 315 aa12.56□□□□□ -0.4
VARS-219ENST00000461328 MTNR1BP49286 362 aa12.56□□□□□ -0.4
VARS-219ENST00000461328 MEF2CQ06413 473 aaPredicted RBP12.56□□□□□ -0.4
VARS-219ENST00000461328 IZUMO2Q6UXV1 221 aa12.56□□□□□ -0.4
VARS-219ENST00000461328 ZNF485Q8NCK3 441 aa12.56□□□□□ -0.4
VARS-219ENST00000461328 OR4S1Q8NGB4 309 aa12.56□□□□□ -0.4
VARS-219ENST00000461328 ORAI1Q96D31 301 aa12.56□□□□□ -0.4
VARS-219ENST00000461328 PGLYRP3Q96LB9 341 aa12.56□□□□□ -0.4
VARS-219ENST00000461328 OR14A2Q96R54 314 aa12.56□□□□□ -0.4
VARS-219ENST00000461328 NR1H4Q96RI1 486 aaPredicted RBP12.56□□□□□ -0.4
VARS-219ENST00000461328 S100A13Q99584 98 aa12.56□□□□□ -0.4
VARS-219ENST00000461328 MND1Q9BWT6 205 aa12.56□□□□□ -0.4
VARS-219ENST00000461328 PPA2Q9H2U2 334 aa12.56□□□□□ -0.4
VARS-219ENST00000461328 SEBOXQ9HB31 216 aaPredicted RBP12.56□□□□□ -0.4
VARS-219ENST00000461328 BEX1Q9HBH7 125 aa12.56□□□□□ -0.4
VARS-219ENST00000461328 FKBP14Q9NWM8 211 aa12.56□□□□□ -0.4
VARS-219ENST00000461328 ING3Q9NXR8 418 aa12.56□□□□□ -0.4
VARS-219ENST00000461328 ZNRD1Q9P1U0 126 aa12.56□□□□□ -0.4
VARS-219ENST00000461328 TRBV5-5A0A0J9YX44 114 aa12.55□□□□□ -0.4
VARS-219ENST00000461328 A0A1B0GUS0 222 aa12.55□□□□□ -0.4
VARS-219ENST00000461328 DEGS1O15121 323 aa12.55□□□□□ -0.4
VARS-219ENST00000461328 GPR137BO60478 399 aa12.55□□□□□ -0.4
VARS-219ENST00000461328 ZNF93P35789 620 aaPredicted RBP12.55□□□□□ -0.4
VARS-219ENST00000461328 OR3A4PP47883 348 aa12.55□□□□□ -0.4
VARS-219ENST00000461328 HSPA13P48723 471 aa12.55□□□□□ -0.4
VARS-219ENST00000461328 LGALS4P56470 323 aa12.55□□□□□ -0.4
VARS-219ENST00000461328 RPL15P61313 204 aaKnown RBP12.55□□□□□ -0.4
VARS-219ENST00000461328 ASPHD2Q6ICH7 369 aa12.55□□□□□ -0.4
VARS-219ENST00000461328 ZNF529Q6P280 563 aa12.55□□□□□ -0.4
VARS-219ENST00000461328 CRIP3Q6Q6R5 217 aa12.55□□□□□ -0.4
VARS-219ENST00000461328 NANOGP1Q8N7R0 232 aa12.55□□□□□ -0.4
VARS-219ENST00000461328 CHST4Q8NCG5 386 aa12.55□□□□□ -0.4
VARS-219ENST00000461328 PXT1Q8NFP0 134 aa12.55□□□□□ -0.4
VARS-219ENST00000461328 OR10K1Q8NGX5 313 aa12.55□□□□□ -0.4
VARS-219ENST00000461328 TPRKBQ9Y3C4 175 aa12.55□□□□□ -0.4
VARS-219ENST00000461328 MMP24Q9Y5R2 645 aa12.55□□□□□ -0.4
VARS-219ENST00000461328 LINC00312Q9Y6C7 94 aa12.55□□□□□ -0.4
VARS-219ENST00000461328 A0A1W2PPK0 400 aa12.54□□□□□ -0.4
VARS-219ENST00000461328 FUOMA2VDF0 154 aa12.54□□□□□ -0.4
VARS-219ENST00000461328 HSPB6O14558 160 aa12.54□□□□□ -0.4
VARS-219ENST00000461328 NDUFA7O95182 113 aa12.54□□□□□ -0.4
VARS-219ENST00000461328 HTR3BO95264 441 aa12.54□□□□□ -0.4
VARS-219ENST00000461328 ALDOBP05062 364 aa12.54□□□□□ -0.4
VARS-219ENST00000461328 MYF6P23409 242 aa12.54□□□□□ -0.4
VARS-219ENST00000461328 P2RX3P56373 397 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms