RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 RSU1Q15404 277 aa16.95■□□□□ 0.3
RPUSD3-210ENST00000460909 KCTD21Q4G0X4 260 aa16.95■□□□□ 0.3
RPUSD3-210ENST00000460909 TMEM200BQ69YZ2 307 aa16.95■□□□□ 0.3
RPUSD3-210ENST00000460909 ZNF773Q6PK81 442 aa16.95■□□□□ 0.3
RPUSD3-210ENST00000460909 C1orf122Q6ZSJ8 110 aa16.95■□□□□ 0.3
RPUSD3-210ENST00000460909 C1orf147Q96MC9 270 aaPredicted RBP16.95■□□□□ 0.3
RPUSD3-210ENST00000460909 EXOSC4Q9NPD3 245 aaKnown RBP16.95■□□□□ 0.3
RPUSD3-210ENST00000460909 ONECUT1Q9UBC0 465 aa16.95■□□□□ 0.3
RPUSD3-210ENST00000460909 ZNF69Q9UC07 566 aa16.95■□□□□ 0.3
RPUSD3-210ENST00000460909 GLS2Q9UI32 602 aa16.95■□□□□ 0.3
RPUSD3-210ENST00000460909 IGHV3OR16-10A0A075B7F0 116 aa16.94■□□□□ 0.3
RPUSD3-210ENST00000460909 TRAV40A0A0B4J280 105 aa16.94■□□□□ 0.3
RPUSD3-210ENST00000460909 MEGF11A6BM72 1044 aa16.94■□□□□ 0.3
RPUSD3-210ENST00000460909 SRMP19623 302 aa16.94■□□□□ 0.3
RPUSD3-210ENST00000460909 OR3A1P47881 315 aa16.94■□□□□ 0.3
RPUSD3-210ENST00000460909 RPL31P62899 125 aaKnown RBP16.94■□□□□ 0.3
RPUSD3-210ENST00000460909 FABP5Q01469 135 aa16.94■□□□□ 0.3
RPUSD3-210ENST00000460909 HSD17B12Q53GQ0 312 aa16.94■□□□□ 0.3
RPUSD3-210ENST00000460909 JAGN1Q8N5M9 183 aa16.94■□□□□ 0.3
RPUSD3-210ENST00000460909 NKAIN3Q8N8D7 197 aa16.94■□□□□ 0.3
RPUSD3-210ENST00000460909 OR4S1Q8NGB4 309 aa16.94■□□□□ 0.3
RPUSD3-210ENST00000460909 OR4M1Q8NGD0 313 aa16.94■□□□□ 0.3
RPUSD3-210ENST00000460909 OR4D6Q8NGJ1 314 aa16.94■□□□□ 0.3
RPUSD3-210ENST00000460909 OR5D13Q8NGL4 314 aa16.94■□□□□ 0.3
RPUSD3-210ENST00000460909 MUL1Q969V5 352 aa16.94■□□□□ 0.3
RPUSD3-210ENST00000460909 METTL9Q9H1A3 318 aa16.94■□□□□ 0.3
RPUSD3-210ENST00000460909 TCF7L1Q9HCS4 588 aa16.94■□□□□ 0.3
RPUSD3-210ENST00000460909 NDUFB11Q9NX14 153 aa16.94■□□□□ 0.3
RPUSD3-210ENST00000460909 ING4Q9UNL4 249 aa16.94■□□□□ 0.3
RPUSD3-210ENST00000460909 A0A0G2JK05 382 aa16.93■□□□□ 0.3
RPUSD3-210ENST00000460909 CENPVL3A0A0U1RRI6 287 aa16.93■□□□□ 0.3
RPUSD3-210ENST00000460909 A0A1W2PQ09 198 aa16.93■□□□□ 0.3
RPUSD3-210ENST00000460909 M0R1W7 72 aa16.93■□□□□ 0.3
RPUSD3-210ENST00000460909 SIRPB1O00241 398 aa16.93■□□□□ 0.3
RPUSD3-210ENST00000460909 RGS9O75916 674 aaPredicted RBP16.93■□□□□ 0.3
RPUSD3-210ENST00000460909 HTR3BO95264 441 aa16.93■□□□□ 0.3
RPUSD3-210ENST00000460909 GABRR1P24046 479 aa16.93■□□□□ 0.3
RPUSD3-210ENST00000460909 SCGB2A2Q13296 93 aa16.93■□□□□ 0.3
RPUSD3-210ENST00000460909 PDCD1Q15116 288 aa16.93■□□□□ 0.3
RPUSD3-210ENST00000460909 NHLRC3Q5JS37 347 aa16.93■□□□□ 0.3
RPUSD3-210ENST00000460909 C9orf139Q6ZV77 190 aa16.93■□□□□ 0.3
RPUSD3-210ENST00000460909 VMO1Q7Z5L0 202 aa16.93■□□□□ 0.3
RPUSD3-210ENST00000460909 FAM185AQ8N0U4 392 aa16.93■□□□□ 0.3
RPUSD3-210ENST00000460909 BCL6BQ8N143 479 aaPredicted RBP16.93■□□□□ 0.3
RPUSD3-210ENST00000460909 C11orf42Q8N5U0 333 aa16.93■□□□□ 0.3
RPUSD3-210ENST00000460909 C22orf15Q8WYQ4 148 aa16.93■□□□□ 0.3
RPUSD3-210ENST00000460909 CHST6Q9GZX3 395 aa16.93■□□□□ 0.3
RPUSD3-210ENST00000460909 A0A1W2PP11 408 aa16.92■□□□□ 0.3
RPUSD3-210ENST00000460909 ZNF273Q14593 569 aa16.92■□□□□ 0.3
RPUSD3-210ENST00000460909 IL13RA2Q14627 380 aa16.92■□□□□ 0.3
RPUSD3-210ENST00000460909 GRK1Q15835 563 aa16.92■□□□□ 0.3
RPUSD3-210ENST00000460909 PIGYQ3MUY2 71 aa16.92■□□□□ 0.3
RPUSD3-210ENST00000460909 CD200R1LQ6Q8B3 271 aa16.92■□□□□ 0.3
RPUSD3-210ENST00000460909 GDPD3Q7L5L3 318 aa16.92■□□□□ 0.3
RPUSD3-210ENST00000460909 CMTM4Q8IZR5 234 aa16.92■□□□□ 0.3
RPUSD3-210ENST00000460909 FCGR1BQ92637 280 aa16.92■□□□□ 0.3
RPUSD3-210ENST00000460909 TNFRSF14Q92956 283 aa16.92■□□□□ 0.3
RPUSD3-210ENST00000460909 NR1H4Q96RI1 486 aaPredicted RBP16.92■□□□□ 0.3
RPUSD3-210ENST00000460909 SLC6A7Q99884 636 aa16.92■□□□□ 0.3
RPUSD3-210ENST00000460909 UQCC2Q9BRT2 126 aa16.92■□□□□ 0.3
RPUSD3-210ENST00000460909 UNKLQ9H9P5 680 aaKnown RBP16.92■□□□□ 0.3
RPUSD3-210ENST00000460909 MRPS28Q9Y2Q9 187 aaKnown RBP16.92■□□□□ 0.3
RPUSD3-210ENST00000460909 SOX21Q9Y651 276 aaPredicted RBP16.92■□□□□ 0.3
RPUSD3-210ENST00000460909 SLC33A1O00400 549 aaPredicted RBP16.91■□□□□ 0.3
RPUSD3-210ENST00000460909 MGST3O14880 152 aa16.91■□□□□ 0.3
RPUSD3-210ENST00000460909 DEGS1O15121 323 aa16.91■□□□□ 0.3
RPUSD3-210ENST00000460909 ZNF780AO75290 641 aaPredicted RBP16.91■□□□□ 0.3
RPUSD3-210ENST00000460909 ZNF44P15621 663 aa16.91■□□□□ 0.3
RPUSD3-210ENST00000460909 FPR2P25090 351 aa16.91■□□□□ 0.3
RPUSD3-210ENST00000460909 DLX6P56179 175 aa16.91■□□□□ 0.3
RPUSD3-210ENST00000460909 METAP1DQ6UB28 335 aaPredicted RBP16.91■□□□□ 0.3
RPUSD3-210ENST00000460909 GLIPR1L1Q6UWM5 242 aa16.91■□□□□ 0.3
RPUSD3-210ENST00000460909 TCF23Q7RTU1 214 aa16.91■□□□□ 0.3
RPUSD3-210ENST00000460909 OSR2Q8N2R0 312 aa16.91■□□□□ 0.3
RPUSD3-210ENST00000460909 CHST4Q8NCG5 386 aa16.91■□□□□ 0.3
RPUSD3-210ENST00000460909 TBC1D15Q8TC07 691 aa16.91■□□□□ 0.3
RPUSD3-210ENST00000460909 S100A13Q99584 98 aa16.91■□□□□ 0.3
RPUSD3-210ENST00000460909 GFI1Q99684 422 aa16.91■□□□□ 0.3
RPUSD3-210ENST00000460909 OCEL1Q9H607 264 aa16.91■□□□□ 0.3
RPUSD3-210ENST00000460909 ZNF581Q9P0T4 197 aa16.91■□□□□ 0.3
RPUSD3-210ENST00000460909 ARL6IP5O75915 188 aa16.9■□□□□ 0.3
RPUSD3-210ENST00000460909 CSTBP04080 98 aaKnown RBP16.9■□□□□ 0.3
RPUSD3-210ENST00000460909 SERPINA2P20848 420 aa16.9■□□□□ 0.3
RPUSD3-210ENST00000460909 ERP29P30040 261 aaKnown RBP16.9■□□□□ 0.3
RPUSD3-210ENST00000460909 DLX1P56177 255 aa16.9■□□□□ 0.3
RPUSD3-210ENST00000460909 EDDM3BP56851 147 aa16.9■□□□□ 0.3
RPUSD3-210ENST00000460909 RBM11P57052 281 aaKnown RBP16.9■□□□□ 0.3
RPUSD3-210ENST00000460909 BPIFB3P59826 476 aa16.9■□□□□ 0.3
RPUSD3-210ENST00000460909 MEF2CQ06413 473 aaPredicted RBP16.9■□□□□ 0.3
RPUSD3-210ENST00000460909 SCN1BQ07699 218 aa16.9■□□□□ 0.3
RPUSD3-210ENST00000460909 SLC22A6Q4U2R8 563 aa16.9■□□□□ 0.3
RPUSD3-210ENST00000460909 C1orf100Q5SVJ3 147 aa16.9■□□□□ 0.3
RPUSD3-210ENST00000460909 GPR157Q5UAW9 335 aa16.9■□□□□ 0.3
RPUSD3-210ENST00000460909 BRD3OSQ6XYD6 125 aa16.9■□□□□ 0.3
RPUSD3-210ENST00000460909 USP43Q70EL4 1123 aa16.9■□□□□ 0.3
RPUSD3-210ENST00000460909 TPRX1Q8N7U7 411 aa16.9■□□□□ 0.3
RPUSD3-210ENST00000460909 LHX4Q969G2 390 aa16.9■□□□□ 0.3
RPUSD3-210ENST00000460909 IFT22Q9H7X7 185 aa16.9■□□□□ 0.3
RPUSD3-210ENST00000460909 METTL8Q9H825 291 aaKnown RBP16.9■□□□□ 0.3
RPUSD3-210ENST00000460909 SIRT7Q9NRC8 400 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms