RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-209	ENST00000460731	WNT2	P09544	360 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	UBB	P0CG47	229 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	LYNX1	P0DP58	116 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	SLC25A16	P16260	332 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	RAB3B	P20337	219 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	ZFP36	P26651	326 aa	Known RBP	4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	SDC2	P34741	201 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	NR4A2	P43354	598 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	NPBWR2	P48146	333 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	PDLIM4	P50479	330 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	BMX	P51813	675 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	CAPZA1	P52907	286 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	FGF12	P61328	243 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	LMO4	P61968	165 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	LOXL1	Q08397	574 aa	Predicted RBP	4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	GPR176	Q14439	515 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	ZMYND11	Q15326	602 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	ZNF404	Q494X3	552 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	DMRTC1	Q5HYR2	192 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	DDI2	Q5TDH0	399 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	GPR107	Q5VW38	600 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	PRAMEF6	Q5VXH4	476 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	GLT8D1	Q68CQ7	371 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	HAGHL	Q6PII5	290 aa	Predicted RBP	4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	ZNF841	Q6ZN19	808 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	ACP7	Q6ZNF0	438 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	SLC25A26	Q70HW3	274 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	SATL1	Q86VE3	508 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	CROCCP3	Q8IVE0	287 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	ZNF525	Q8N782	197 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	OR4D6	Q8NGJ1	314 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	OR6M1	Q8NGM8	313 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	OR11L1	Q8NGX0	322 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	OR51F2	Q8NH61	342 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	ANGPTL6	Q8NI99	470 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	RAB2B	Q8WUD1	216 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	CCL17	Q92583	94 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	DGCR14	Q96DF8	476 aa	Known RBP	4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	SDSL	Q96GA7	329 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	CHCHD6	Q9BRQ6	235 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	MRI1	Q9BV20	369 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	NAA50	Q9GZZ1	169 aa	Known RBP	4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	SLITRK2	Q9H156	845 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	RNF167	Q9H6Y7	350 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	HMG20A	Q9NP66	347 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	C1orf123	Q9NWV4	160 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	NDUFA13	Q9P0J0	144 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	WIPI2	Q9Y4P8	454 aa		4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	NSD1	Q96L73	2696 aa	Predicted RBP	4.69	□□□□□ -1.66
PTPN12-209	ENST00000460731	TEP1	Q99973	2627 aa	Known RBP	4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	ARHGAP32	A7KAX9	2087 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	IGKV1D-17	A0A075B6S4	117 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	PPIAL4E	A0A075B759	164 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	IGHV4-30-2	A0A087WSY4	118 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	TRAV38-1	A0A0B4J264	116 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	PPIAL4C	A0A0B4J2A2	164 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	DPPA5	A6NC42	116 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	FAM90A10P	A6NDY2	464 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	FAM90A18P	A6NE21	464 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	FAM90A16P	A6NEW6	464 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	OOEP	A6NGQ2	149 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	FAM90A20P	A6NIJ5	464 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	FAM90A8P	A6NJQ4	464 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	FAM90A7P	A6NKC0	464 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	FOXI3	A8MTJ6	420 aa	Predicted RBP	4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	FAM90A22P	A8MWA6	464 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	FAM90A12P	A8MX19	464 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	FAM90A5P	A8MXJ8	464 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	FAM90A23P	A8MXZ1	464 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	CLDN25	C9JDP6	229 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	PPIAL4D	F5H284	164 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	TPD52L2	O43399	206 aa	Known RBP	4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	SSX4	O60224	188 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	ZNF737	O75373	536 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	FCN3	O75636	299 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	MAS1	P04201	325 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	GLA	P06280	429 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	FAM90A15P	P0C7V4	464 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	FAM90A13P	P0C7W8	464 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	FAM90A14P	P0C7W9	464 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	FAM90A24P	P0C7X0	464 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	PPIAL4F	P0DN26	164 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	PSG2	P11465	335 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	EGR1	P18146	543 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	HTR2C	P28335	458 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	MDH2	P40926	338 aa	Known RBP	4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	OR3A4P	P47883	348 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	OR10A3	P58181	314 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	NCS1	P62166	190 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	BTG1	P62324	171 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	DGUOK	Q16854	277 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	CLEC12B	Q2HXU8	276 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	TM4SF20	Q53R12	229 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	KIAA2026	Q5HYC2	2103 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	SPIN3	Q5JUX0	258 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	STUM	Q69YW2	141 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731		Q6P435	159 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	CLEC2A	Q6UVW9	174 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	ZNF788	Q6ZQV5	615 aa		4.68	□□□□□ -1.66
PTPN12-209	ENST00000460731	DCDC5	Q6ZRR9	648 aa		4.68	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms