RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 CITED2Q99967 270 aaPredicted RBP5.54□□□□□ -1.52
HLA-DQA1-205ENST00000460633 CMC2Q9NRP2 79 aa5.54□□□□□ -1.52
HLA-DQA1-205ENST00000460633 GAB2Q9UQC2 676 aa5.54□□□□□ -1.52
HLA-DQA1-205ENST00000460633 MYO10Q9HD67 2058 aa5.54□□□□□ -1.52
HLA-DQA1-205ENST00000460633 GPR31O00270 319 aa5.54□□□□□ -1.52
HLA-DQA1-205ENST00000460633 CEACAM5P06731 702 aa5.54□□□□□ -1.52
HLA-DQA1-205ENST00000460633 HIST1H1BP16401 226 aaKnown RBP5.54□□□□□ -1.52
HLA-DQA1-205ENST00000460633 ATF1P18846 271 aa5.54□□□□□ -1.52
HLA-DQA1-205ENST00000460633 GFERP55789 205 aa5.54□□□□□ -1.52
HLA-DQA1-205ENST00000460633 TOMM34Q15785 309 aaPredicted RBP5.54□□□□□ -1.52
HLA-DQA1-205ENST00000460633 FBXW12Q6X9E4 464 aa5.54□□□□□ -1.52
HLA-DQA1-205ENST00000460633 TMEM182Q6ZP80 229 aaPredicted RBP5.54□□□□□ -1.52
HLA-DQA1-205ENST00000460633 MARVELD3Q96A59 401 aa5.54□□□□□ -1.52
HLA-DQA1-205ENST00000460633 SMIM19Q96E16 107 aa5.54□□□□□ -1.52
HLA-DQA1-205ENST00000460633 TRBV5-4A0A0C4DH59 114 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 CD14P08571 375 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 FOLR1P15328 257 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 HIST1H1CP16403 213 aaKnown RBP5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 COX7A1P24310 79 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 RPL13AP40429 203 aaKnown RBP5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 MRPS34P82930 218 aaKnown RBP5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 KIAA0040Q15053 153 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 CDK5R1Q15078 307 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 MEP1BQ16820 701 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 C11orf87Q6NUJ2 197 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 C16orf54Q6UWD8 224 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 CBLN2Q8IUK8 224 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 NOXO1Q8NFA2 376 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 OR10G3Q8NGC4 313 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 KTI12Q96EK9 354 aaPredicted RBP5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 TRAV1-2A0A0B4J238 106 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 M0R135 149 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 SS18L1O75177 396 aaPredicted RBP5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 RAC3P60763 192 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 CALHM1Q8IU99 346 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 ZNF799Q96GE5 643 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 NDUFB6O95139 128 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 TGFAP01135 160 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 CD5P06127 495 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 LIMS3P0CW19 117 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 LIMS4P0CW20 117 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 CD99P14209 185 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 TBR1Q16650 682 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 C10orf111Q8N326 155 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 WDR61Q9GZS3 305 aaKnown RBP5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 SERTAD4Q9NUC0 356 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 PILRAQ9UKJ1 303 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 RAB22AQ9UL26 194 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 IGHV3-20A0A0C4DH32 117 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 DBX1A6NMT0 343 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 PHOX2AO14813 284 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 TCF21O43680 179 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 PEX11BO96011 259 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 HPNP05981 417 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 THBS4P35443 961 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 RAG2P55895 527 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 FUT7Q11130 342 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 IRF3Q14653 427 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 MFSD12Q6NUT3 480 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 TMEM92Q6UXU6 159 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 WFDC5Q8TCV5 224 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 TMEM18Q96B42 140 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 SCMH1Q96GD3 660 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 MEGF10Q96KG7 1140 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 ZCCHC4Q9H5U6 513 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 ZMIZ1Q9ULJ6 1067 aa5.53□□□□□ -1.52
HLA-DQA1-205ENST00000460633 OR2M5A3KFT3 312 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 TAAR5O14804 337 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 IGF2P01344 180 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 HLA-DOBP13765 273 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 DAOP14920 347 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 RPS18P62269 152 aaKnown RBP5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 SKP2Q13309 424 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 ADIRFQ15847 76 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 HAGHQ16775 308 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 C1QL3Q5VWW1 255 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 FAM199XQ6PEV8 388 aaPredicted RBP5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 DRAM2Q6UX65 266 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 OR1S2Q8NGQ3 325 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 OR2G3Q8NGZ4 309 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 ABHD17AQ96GS6 310 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 PRO1933Q9H354 126 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 TMPRSS5Q9H3S3 457 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 TAS2R4Q9NYW5 299 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 LOC105371242A0A075B767 164 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 UBE2L6O14933 153 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 LANCL1O43813 399 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 FCMRO60667 390 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 NXPH3O95157 252 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 HPXP02790 462 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 SULT1A3P0DMM9 295 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 SULT1A4P0DMN0 295 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 FCGR2CP31995 323 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 SPCS3P61009 180 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 SP5Q6BEB4 398 aaPredicted RBP5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 LYG2Q86SG7 212 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 RTN4RL2Q86UN3 420 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 TMEM105Q8N8V8 129 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 NUDT10Q8NFP7 164 aa5.52□□□□□ -1.53
HLA-DQA1-205ENST00000460633 OR10D4PQ8NGN7 298 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms