RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 ATAD3CQ5T2N8 411 aa9.21□□□□□ -0.94
SMNDC1-203ENST00000460483 BTNL3Q6UXE8 466 aa9.21□□□□□ -0.94
SMNDC1-203ENST00000460483 SPNS3Q6ZMD2 512 aa9.21□□□□□ -0.94
SMNDC1-203ENST00000460483 ZNF788Q6ZQV5 615 aa9.21□□□□□ -0.94
SMNDC1-203ENST00000460483 C1QL2Q7Z5L3 287 aa9.21□□□□□ -0.94
SMNDC1-203ENST00000460483 TMEM185AQ8NFB2 350 aa9.21□□□□□ -0.94
SMNDC1-203ENST00000460483 NEK7Q8TDX7 302 aa9.21□□□□□ -0.94
SMNDC1-203ENST00000460483 SLC25A28Q96A46 364 aa9.21□□□□□ -0.94
SMNDC1-203ENST00000460483 ZNF488Q96MN9 340 aa9.21□□□□□ -0.94
SMNDC1-203ENST00000460483 NUDT16L1Q9BRJ7 211 aaKnown RBP9.21□□□□□ -0.94
SMNDC1-203ENST00000460483 SSBP3Q9BWW4 388 aaPredicted RBP9.21□□□□□ -0.94
SMNDC1-203ENST00000460483 TM2D1Q9BX74 207 aa9.21□□□□□ -0.94
SMNDC1-203ENST00000460483 RNF167Q9H6Y7 350 aa9.21□□□□□ -0.94
SMNDC1-203ENST00000460483 SLC25A10Q9UBX3 287 aaPredicted RBP9.21□□□□□ -0.94
SMNDC1-203ENST00000460483 RAI1Q7Z5J4 1906 aaPredicted RBP9.21□□□□□ -0.94
SMNDC1-203ENST00000460483 PRR14LQ5THK1 2151 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 IGHV3OR15-7A0A075B7D8 119 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 PPIAL4CA0A0B4J2A2 164 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 SHISA3A0PJX4 238 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 DPPA5A6NC42 116 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 MGST3O14880 152 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 ZNF205O95201 554 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 OR2H2O95918 312 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 IGHV2-5P01817 119 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 CSN2P05814 226 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 WNT2P09544 360 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 FOSL1P15407 271 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 EGR1P18146 543 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 S100A5P33763 92 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 CLDN12P56749 244 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 TAF9Q16594 264 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 PAN3Q58A45 887 aaKnown RBP9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 UBE2NLQ5JXB2 153 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 CMTM4Q8IZR5 234 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 OR8H2Q8N162 312 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 ZNF565Q8N9K5 539 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 LINC01356Q8N9X3 169 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 OR5T2Q8NGG2 359 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 OR10K1Q8NGX5 313 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 CLDND2Q8NHS1 167 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 NDNFQ8TB73 568 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 Q96M66 194 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 CCL13Q99616 98 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 NAA50Q9GZZ1 169 aaKnown RBP9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 ATG5Q9H1Y0 275 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 BANF2Q9H503 90 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 NARFLQ9H6Q4 476 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 PLEKHJ1Q9NW61 149 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 HSF4Q9ULV5 492 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 MGAT4AQ9UM21 535 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 A3GALT2U3KPV4 340 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 CELSR2Q9HCU4 2923 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 PLCE1Q9P212 2302 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 NAV2Q8IVL1 2488 aa9.2□□□□□ -0.94
SMNDC1-203ENST00000460483 IGKV1D-17A0A075B6S4 117 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 LOC105371242A0A075B767 164 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 TRAV20A0A0B4J274 112 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 A0A0G2JK05 382 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 hADV38S2A0JD32 116 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 SERPINE3A8MV23 424 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 K7N7A8 449 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 DVL1O14640 695 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 GEMIN2O14893 280 aaKnown RBP9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 RGS5O15539 181 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 PDCD6O75340 191 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 TPPPO94811 219 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 APOA1P02647 267 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 TK1P04183 234 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 SLC2A2P11168 524 aaPredicted RBP9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 NDUFB7P17568 137 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 ERP29P30040 261 aaKnown RBP9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 BLVRBP30043 206 aaPredicted RBP9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 MNDAP41218 407 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 SNU13P55769 128 aaKnown RBP9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 PITPNAQ00169 270 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 COL10A1Q03692 680 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 MEF2CQ06413 473 aaPredicted RBP9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 GRK1Q15835 563 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 FAM201AQ5SY85 155 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 CYB5R2Q6BCY4 276 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 CRIP3Q6Q6R5 217 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 Q6ZTK2 550 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 TGIF2LYQ8IUE0 185 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 FAM89BQ8N5H3 189 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 WFDC11Q8NEX6 87 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 RAB3CQ96E17 227 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 C1orf147Q96MC9 270 aaPredicted RBP9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 GFI1Q99684 422 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 RBM38Q9H0Z9 239 aaKnown RBP9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 MMP27Q9H306 513 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 NCOR1P1Q9H4R4 102 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 RHBDL2Q9NX52 303 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 OR6C3Q9NZP0 311 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 COMMD3Q9UBI1 195 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 ZNF222Q9UK12 451 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 PEX16Q9Y5Y5 336 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 ROS1P08922 2347 aa9.19□□□□□ -0.94
SMNDC1-203ENST00000460483 ASH1LQ9NR48 2969 aaKnown RBP9.18□□□□□ -0.94
SMNDC1-203ENST00000460483 A0A075B6Q4 140 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms