RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 TMEM80Q96HE8 168 aa13.13□□□□□ -0.31
COL7A1-203ENST00000459756 CNBD2Q96M20 576 aa13.13□□□□□ -0.31
COL7A1-203ENST00000459756 EXOSC1Q9Y3B2 195 aaKnown RBP13.13□□□□□ -0.31
COL7A1-203ENST00000459756 CLPSL1A2RUU4 121 aa13.12□□□□□ -0.31
COL7A1-203ENST00000459756 MGST3O14880 152 aa13.12□□□□□ -0.31
COL7A1-203ENST00000459756 PSPNO60542 156 aa13.12□□□□□ -0.31
COL7A1-203ENST00000459756 CD2P06729 351 aa13.12□□□□□ -0.31
COL7A1-203ENST00000459756 CALCBP10092 127 aa13.12□□□□□ -0.31
COL7A1-203ENST00000459756 COX7A1P24310 79 aa13.12□□□□□ -0.31
COL7A1-203ENST00000459756 SNU13P55769 128 aaKnown RBP13.12□□□□□ -0.31
COL7A1-203ENST00000459756 LGALS4P56470 323 aa13.12□□□□□ -0.31
COL7A1-203ENST00000459756 MED21Q13503 144 aa13.12□□□□□ -0.31
COL7A1-203ENST00000459756 AANATQ16613 207 aa13.12□□□□□ -0.31
COL7A1-203ENST00000459756 OR2G6Q5TZ20 316 aa13.12□□□□□ -0.31
COL7A1-203ENST00000459756 LAIR2Q6ISS4 152 aa13.12□□□□□ -0.31
COL7A1-203ENST00000459756 ZNF529Q6P280 563 aa13.12□□□□□ -0.31
COL7A1-203ENST00000459756 CRIP3Q6Q6R5 217 aa13.12□□□□□ -0.31
COL7A1-203ENST00000459756 RNF144BQ7Z419 303 aa13.12□□□□□ -0.31
COL7A1-203ENST00000459756 OR13D1Q8NGV5 346 aa13.12□□□□□ -0.31
COL7A1-203ENST00000459756 RPS4Y2Q8TD47 263 aa13.12□□□□□ -0.31
COL7A1-203ENST00000459756 C17orf50Q8WW18 174 aa13.12□□□□□ -0.31
COL7A1-203ENST00000459756 RGP1Q92546 391 aaPredicted RBP13.12□□□□□ -0.31
COL7A1-203ENST00000459756 AJUBAQ96IF1 538 aa13.12□□□□□ -0.31
COL7A1-203ENST00000459756 ZNF714Q96N38 554 aa13.12□□□□□ -0.31
COL7A1-203ENST00000459756 CHST6Q9GZX3 395 aa13.12□□□□□ -0.31
COL7A1-203ENST00000459756 MEGF9Q9H1U4 602 aa13.12□□□□□ -0.31
COL7A1-203ENST00000459756 EXOSC4Q9NPD3 245 aaKnown RBP13.12□□□□□ -0.31
COL7A1-203ENST00000459756 CHCHD3Q9NX63 227 aaKnown RBP13.12□□□□□ -0.31
COL7A1-203ENST00000459756 BABAM2Q9NXR7 383 aa13.12□□□□□ -0.31
COL7A1-203ENST00000459756 GSTK1Q9Y2Q3 226 aa13.12□□□□□ -0.31
COL7A1-203ENST00000459756 LINC00312Q9Y6C7 94 aa13.12□□□□□ -0.31
COL7A1-203ENST00000459756 MAGEB3O15480 346 aa13.11□□□□□ -0.31
COL7A1-203ENST00000459756 OGG1O15527 345 aa13.11□□□□□ -0.31
COL7A1-203ENST00000459756 OR2H2O95918 312 aa13.11□□□□□ -0.31
COL7A1-203ENST00000459756 TMEM225BP0DP42 221 aa13.11□□□□□ -0.31
COL7A1-203ENST00000459756 RAB3AP20336 220 aa13.11□□□□□ -0.31
COL7A1-203ENST00000459756 ERP29P30040 261 aaKnown RBP13.11□□□□□ -0.31
COL7A1-203ENST00000459756 TGFBR2P37173 567 aa13.11□□□□□ -0.31
COL7A1-203ENST00000459756 OR3A1P47881 315 aa13.11□□□□□ -0.31
COL7A1-203ENST00000459756 ZP1P60852 638 aa13.11□□□□□ -0.31
COL7A1-203ENST00000459756 OLFML2AQ68BL7 652 aa13.11□□□□□ -0.31
COL7A1-203ENST00000459756 XAF1Q6GPH4 301 aa13.11□□□□□ -0.31
COL7A1-203ENST00000459756 DHRS7BQ6IAN0 325 aaPredicted RBP13.11□□□□□ -0.31
COL7A1-203ENST00000459756 ZNF782Q6ZMW2 699 aaPredicted RBP13.11□□□□□ -0.31
COL7A1-203ENST00000459756 AHSA2Q719I0 299 aa13.11□□□□□ -0.31
COL7A1-203ENST00000459756 OR4S1Q8NGB4 309 aa13.11□□□□□ -0.31
COL7A1-203ENST00000459756 OR52N1Q8NH53 320 aa13.11□□□□□ -0.31
COL7A1-203ENST00000459756 WFDC12Q8WWY7 111 aa13.11□□□□□ -0.31
COL7A1-203ENST00000459756 ANKRD60Q9BZ19 345 aa13.11□□□□□ -0.31
COL7A1-203ENST00000459756 PKD1L1Q8TDX9 2849 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 MEX3AA1L020 520 aaKnown RBP13.1□□□□□ -0.31
COL7A1-203ENST00000459756 FUOMA2VDF0 154 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 EFCAB10A6NFE3 127 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 H3BUX3 64 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 SIRPB1O00241 398 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 IGHV1-8P0DP01 117 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 MYF6P23409 242 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 LMO1P25800 156 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 SOX2P48431 317 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 BMXP51813 675 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 P2RX3P56373 397 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 LRRC75BQ2VPJ9 315 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 PRR31Q5SQ13 230 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 TCF23Q7RTU1 214 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 STX19Q8N4C7 294 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 CHST4Q8NCG5 386 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 PXT1Q8NFP0 134 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 FBLIM1Q8WUP2 373 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 GGHQ92820 318 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 TMEM106AQ96A25 262 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 SMIM19Q96E16 107 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 SSX3Q99909 188 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 ZNF696Q9H7X3 374 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 CNOT2Q9NZN8 540 aaKnown RBP13.1□□□□□ -0.31
COL7A1-203ENST00000459756 CLEC2DQ9UHP7 191 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 ZNF281Q9Y2X9 895 aa13.1□□□□□ -0.31
COL7A1-203ENST00000459756 SIRT4Q9Y6E7 314 aaPredicted RBP13.1□□□□□ -0.31
COL7A1-203ENST00000459756 MTNR1BP49286 362 aa13.09□□□□□ -0.31
COL7A1-203ENST00000459756 ST3GAL4Q11206 333 aa13.09□□□□□ -0.31
COL7A1-203ENST00000459756 C6orf141Q5SZD1 244 aa13.09□□□□□ -0.31
COL7A1-203ENST00000459756 ELP2Q6IA86 826 aa13.09□□□□□ -0.31
COL7A1-203ENST00000459756 TPRX1Q8N7U7 411 aa13.09□□□□□ -0.31
COL7A1-203ENST00000459756 OR11H6Q8NGC7 330 aa13.09□□□□□ -0.31
COL7A1-203ENST00000459756 LINC01006Q8NI28 216 aa13.09□□□□□ -0.31
COL7A1-203ENST00000459756 FOXRED1Q96CU9 486 aaPredicted RBP13.09□□□□□ -0.31
COL7A1-203ENST00000459756 GPER1Q99527 375 aa13.09□□□□□ -0.31
COL7A1-203ENST00000459756 ZNF184Q99676 751 aaPredicted RBP13.09□□□□□ -0.31
COL7A1-203ENST00000459756 C16orf95Q9H693 158 aa13.09□□□□□ -0.31
COL7A1-203ENST00000459756 TAS2R4Q9NYW5 299 aa13.09□□□□□ -0.31
COL7A1-203ENST00000459756 RAB26Q9ULW5 256 aa13.09□□□□□ -0.31
COL7A1-203ENST00000459756 UBE2J1Q9Y385 318 aaPredicted RBP13.09□□□□□ -0.31
COL7A1-203ENST00000459756 TBL2Q9Y4P3 447 aaKnown RBP13.09□□□□□ -0.31
COL7A1-203ENST00000459756 RNF114Q9Y508 228 aa13.09□□□□□ -0.31
COL7A1-203ENST00000459756 A0A0G2JK05 382 aa13.08□□□□□ -0.32
COL7A1-203ENST00000459756 FAM90A8PA6NJQ4 464 aa13.08□□□□□ -0.32
COL7A1-203ENST00000459756 ODF3BA8MYP8 253 aa13.08□□□□□ -0.32
COL7A1-203ENST00000459756 PTGES3LE9PB15 166 aa13.08□□□□□ -0.32
COL7A1-203ENST00000459756 LALBAP00709 142 aa13.08□□□□□ -0.32
COL7A1-203ENST00000459756 ALDOBP05062 364 aa13.08□□□□□ -0.32
COL7A1-203ENST00000459756 ARG1P05089 322 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms