RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 OR10A7Q8NGE5 316 aa7.4□□□□□ -1.23
VPS50-208ENST00000458707 SLAMF9Q96A28 289 aa7.4□□□□□ -1.23
VPS50-208ENST00000458707 PGAM5Q96HS1 289 aa7.4□□□□□ -1.23
VPS50-208ENST00000458707 S100A13Q99584 98 aa7.4□□□□□ -1.23
VPS50-208ENST00000458707 RSRP1Q9BUV0 290 aa7.4□□□□□ -1.23
VPS50-208ENST00000458707 C20orf24Q9BUV8 137 aa7.4□□□□□ -1.23
VPS50-208ENST00000458707 ANGPTL4Q9BY76 406 aa7.4□□□□□ -1.23
VPS50-208ENST00000458707 TOLLIPQ9H0E2 274 aa7.4□□□□□ -1.23
VPS50-208ENST00000458707 C11orf1Q9H5F2 150 aa7.4□□□□□ -1.23
VPS50-208ENST00000458707 NECAP2Q9NVZ3 263 aa7.4□□□□□ -1.23
VPS50-208ENST00000458707 PLEKHJ1Q9NW61 149 aa7.4□□□□□ -1.23
VPS50-208ENST00000458707 CLEC1BQ9P126 229 aa7.4□□□□□ -1.23
VPS50-208ENST00000458707 TCFL5Q9UL49 500 aa7.4□□□□□ -1.23
VPS50-208ENST00000458707 EYSQ5T1H1 3165 aa7.4□□□□□ -1.23
VPS50-208ENST00000458707 IGLV3-12A0A075B6K2 115 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 NSG1A0A0A6YYJ2 146 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 IGHV3-20A0A0C4DH32 117 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 A0A1W2PR77 199 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 AQP7P3A6NL99 342 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 ZNF814B7Z6K7 855 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 LMO7DNF2Z398 122 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 TXNL1O43396 289 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 PIAS2O75928 621 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 OR5AC1P0C628 307 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 ZNF728P0DKX0 622 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 FOLR1P15328 257 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 CHATP28329 748 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 DUSP1P28562 367 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 ARL4DP49703 201 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 OR2B8PP59922 312 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 CFHR1Q03591 330 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 HIKESHIQ53FT3 197 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 C10orf128Q5T292 105 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 C1orf189Q5VU69 101 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 SP5Q6BEB4 398 aaPredicted RBP7.39□□□□□ -1.23
VPS50-208ENST00000458707 PLXDC2Q6UX71 529 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 CLEC9AQ6UXN8 241 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 DTX1Q86Y01 620 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 FAM216AQ8WUB2 273 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 RTN4IP1Q8WWV3 396 aaPredicted RBP7.39□□□□□ -1.23
VPS50-208ENST00000458707 TNFRSF14Q92956 283 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 NTNG2Q96CW9 530 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 MSI2Q96DH6 328 aaKnown RBP7.39□□□□□ -1.23
VPS50-208ENST00000458707 MUCL1Q96DR8 90 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 RHOVQ96L33 236 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 HDHD3Q9BSH5 251 aaPredicted RBP7.39□□□□□ -1.23
VPS50-208ENST00000458707 SH3BGRL3Q9H299 93 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 ZNF160Q9HCG1 818 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 PARD6AQ9NPB6 346 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 PRUNE2Q8WUY3 3088 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 CACNA1GO43497 2377 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 MED12Q93074 2177 aa7.39□□□□□ -1.23
VPS50-208ENST00000458707 A0A087WWC5 75 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 IGHV1OR21-1A0A087WYE8 117 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 A0A087X0M5 115 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 A0A1B0GX30 115 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 ST8SIA3O43173 380 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 HSPA12AO43301 675 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 C1QL1O75973 258 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 NXPH2O95156 264 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 OR2C1O95371 312 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 PRH1P02810 166 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 TMEM225BP0DP42 221 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 FAHP16930 419 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 CD38P28907 300 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 APOBEC3AP31941 199 aaPredicted RBP7.38□□□□□ -1.23
VPS50-208ENST00000458707 PPP1CCP36873 323 aaKnown RBP7.38□□□□□ -1.23
VPS50-208ENST00000458707 UCP3P55916 312 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 RSPO1Q2MKA7 263 aaPredicted RBP7.38□□□□□ -1.23
VPS50-208ENST00000458707 DMRTC1Q5HYR2 192 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 SOHLH1Q5JUK2 328 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 CARD17Q5XLA6 110 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 LYZL2Q7Z4W2 148 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 ANKRD37Q7Z713 158 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 ABCA7Q8IZY2 2146 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 GJC3Q8NFK1 279 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 OR5T1Q8NG75 326 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 OR4D5Q8NGN0 318 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 NPRL2Q8WTW4 380 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 C22orf15Q8WYQ4 148 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 ZNF501Q96CX3 271 aaPredicted RBP7.38□□□□□ -1.23
VPS50-208ENST00000458707 SGCZQ96LD1 299 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 PIGQQ9BRB3 760 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 NELFAQ9H3P2 528 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 SIRT7Q9NRC8 400 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 KLRF1Q9NZS2 232 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 AK3Q9UIJ7 227 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 PIGLQ9Y2B2 252 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 FBXO7Q9Y3I1 522 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 SPAG17Q6Q759 2223 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 ASCC3Q8N3C0 2202 aaKnown RBP7.38□□□□□ -1.23
VPS50-208ENST00000458707 A0A1W2PNR3 127 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 ZNF726A6NNF4 738 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 B4E171 279 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 XRCC2O43543 280 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 TLX3O43711 291 aaPredicted RBP7.38□□□□□ -1.23
VPS50-208ENST00000458707 RAMP1O60894 148 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 MSR1P21757 451 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 GABRR1P24046 479 aa7.38□□□□□ -1.23
VPS50-208ENST00000458707 FKBP2P26885 142 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms