RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 CLDN14O95500 239 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 IGKV1D-12P01611 117 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 MT-ND4P03905 459 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 TCRBP04435 133 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 IFNA6P05013 189 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 GLAP06280 429 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 CD3EP07766 207 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 PTHLHP12272 177 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 SPNP16150 400 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 PRKACAP17612 351 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 BCL3P20749 454 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 DTYMKP23919 212 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 GIFP27352 417 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 CHATP28329 748 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 CD200P41217 278 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 KIR2DL3P43628 341 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 TLE4Q04727 773 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 RBM39Q14498 530 aaKnown RBP7.6□□□□□ -1.19
VPS50-207ENST00000458530 RBMS2Q15434 407 aaKnown RBP7.6□□□□□ -1.19
VPS50-207ENST00000458530 NKPD1Q17RQ9 610 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 PLA1AQ53H76 456 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 NKAPLQ5M9Q1 402 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 ZNF782Q6ZMW2 699 aaPredicted RBP7.6□□□□□ -1.19
VPS50-207ENST00000458530 BTN2A1Q7KYR7 527 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 TMEM17Q86X19 198 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 FAM58AQ8N1B3 248 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 OR56B4Q8NH76 319 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 TMEM171Q8WVE6 324 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 NUDCD2Q8WVJ2 157 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 EDARADDQ8WWZ3 215 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 ST8SIA4Q92187 359 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 EMG1Q92979 244 aaKnown RBP7.6□□□□□ -1.19
VPS50-207ENST00000458530 DVL3Q92997 716 aaPredicted RBP7.6□□□□□ -1.19
VPS50-207ENST00000458530 MRPL24Q96A35 216 aaKnown RBP7.6□□□□□ -1.19
VPS50-207ENST00000458530 PRRT1Q99946 306 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 MARVELD1Q9BSK0 173 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 ZMAT3Q9HA38 289 aaKnown RBP7.6□□□□□ -1.19
VPS50-207ENST00000458530 NLKQ9UBE8 527 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 DUSP13Q9UII6 198 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 ZDHHC8Q9ULC8 765 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 ATP23Q9Y6H3 246 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 FN1P02751 2386 aaKnown RBP7.6□□□□□ -1.19
VPS50-207ENST00000458530 AKAP6Q13023 2319 aa7.6□□□□□ -1.19
VPS50-207ENST00000458530 MEIS3P1A6NDR6 274 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 INMT-MINDY4F8WBC2 141 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 H7C1Q1 480 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 GEMIN2O14893 280 aaKnown RBP7.59□□□□□ -1.19
VPS50-207ENST00000458530 PRAF2O60831 178 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 NXPH2O95156 264 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 CD74P04233 296 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 SFTPBP07988 381 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 TRAPPC2P0DI81 140 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 TRAPPC2BP0DI82 140 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 CD99P14209 185 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 NAT1P18440 290 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 AMY2BP19961 511 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 MDH2P40926 338 aaKnown RBP7.59□□□□□ -1.19
VPS50-207ENST00000458530 TMEM50BP56557 158 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 BSPH1Q075Z2 132 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 ZNF154Q13106 437 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 IKZF1Q13422 519 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 TAF9Q16594 264 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 SMIM21Q3B7S5 101 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 PIGYQ3MUY2 71 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 BEX5Q5H9J7 111 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 PLAC9Q5JTB6 97 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 SPIN3Q5JUX0 258 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 VHLLQ6RSH7 139 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 POC1AQ8NBT0 407 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 SCCPDHQ8NBX0 429 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 OR2Z1Q8NG97 314 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 OR4C16Q8NGL9 310 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 OR5H2Q8NGV7 314 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 OR10Z1Q8NGY1 313 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 ELMOD3Q96FG2 381 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 WFIKKN1Q96NZ8 548 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 CMSS1Q9BQ75 279 aaKnown RBP7.59□□□□□ -1.19
VPS50-207ENST00000458530 SLC25A21Q9BQT8 299 aaPredicted RBP7.59□□□□□ -1.19
VPS50-207ENST00000458530 FGF23Q9GZV9 251 aaPredicted RBP7.59□□□□□ -1.19
VPS50-207ENST00000458530 TLNRD1Q9H1K6 362 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 RIMS4Q9H426 269 aaPredicted RBP7.59□□□□□ -1.19
VPS50-207ENST00000458530 IFT22Q9H7X7 185 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 FN3KRPQ9HA64 309 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 C12orf4Q9NQ89 552 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 CA10Q9NS85 328 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 NUDT15Q9NV35 164 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 ZNF701Q9NV72 531 aaPredicted RBP7.59□□□□□ -1.19
VPS50-207ENST00000458530 CRIM1Q9NZV1 1036 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 FBXO9Q9UK97 447 aaPredicted RBP7.59□□□□□ -1.19
VPS50-207ENST00000458530 ANAPC10Q9UM13 185 aa7.59□□□□□ -1.19
VPS50-207ENST00000458530 CADP27708 2225 aa7.58□□□□□ -1.2
VPS50-207ENST00000458530 hCG_1807616A0A1W2PRN6 198 aa7.58□□□□□ -1.2
VPS50-207ENST00000458530 MCRIP1C9JLW8 97 aa7.58□□□□□ -1.2
VPS50-207ENST00000458530 MLNRO43193 412 aa7.58□□□□□ -1.2
VPS50-207ENST00000458530 SYNGR1O43759 233 aa7.58□□□□□ -1.2
VPS50-207ENST00000458530 SSX4O60224 188 aa7.58□□□□□ -1.2
VPS50-207ENST00000458530 NOS1APO75052 506 aaPredicted RBP7.58□□□□□ -1.2
VPS50-207ENST00000458530 NDUFB6O95139 128 aa7.58□□□□□ -1.2
VPS50-207ENST00000458530 CD3DP04234 171 aa7.58□□□□□ -1.2
VPS50-207ENST00000458530 AMY2AP04746 511 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms