RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 KIRREL1Q96J84 757 aa17.8■□□□□ 0.44
CRAT-207ENST00000458362 CDX2Q99626 313 aaPredicted RBP17.8■□□□□ 0.44
CRAT-207ENST00000458362 ZFP57Q9NU63 452 aa17.8■□□□□ 0.44
CRAT-207ENST00000458362 DUSP1P28562 367 aa17.79■□□□□ 0.44
CRAT-207ENST00000458362 GLP1RP43220 463 aa17.79■□□□□ 0.44
CRAT-207ENST00000458362 CYB561P49447 251 aa17.79■□□□□ 0.44
CRAT-207ENST00000458362 HERV-K104P61576 105 aa17.79■□□□□ 0.44
CRAT-207ENST00000458362 ARF1P84077 181 aaKnown RBP17.79■□□□□ 0.44
CRAT-207ENST00000458362 DMBX1Q8NFW5 382 aa17.79■□□□□ 0.44
CRAT-207ENST00000458362 HS3ST6Q96QI5 342 aa17.79■□□□□ 0.44
CRAT-207ENST00000458362 PARPBPQ9NWS1 579 aa17.79■□□□□ 0.44
CRAT-207ENST00000458362 MRPS18CQ9Y3D5 142 aaKnown RBP17.79■□□□□ 0.44
CRAT-207ENST00000458362 SERPINA7P05543 415 aa17.79■□□□□ 0.44
CRAT-207ENST00000458362 DVL1P1P54792 670 aaPredicted RBP17.79■□□□□ 0.44
CRAT-207ENST00000458362 SWI5Q1ZZU3 235 aa17.79■□□□□ 0.44
CRAT-207ENST00000458362 FBXW12Q6X9E4 464 aa17.79■□□□□ 0.44
CRAT-207ENST00000458362 COLCA1Q6ZS62 124 aa17.79■□□□□ 0.44
CRAT-207ENST00000458362 LINC00518Q8N0U6 118 aa17.79■□□□□ 0.44
CRAT-207ENST00000458362 PRDM14Q9GZV8 571 aa17.79■□□□□ 0.44
CRAT-207ENST00000458362 SLC7A10Q9NS82 523 aa17.79■□□□□ 0.44
CRAT-207ENST00000458362 RCL1Q9Y2P8 373 aaKnown RBP17.79■□□□□ 0.44
CRAT-207ENST00000458362 KLF2Q9Y5W3 355 aaPredicted RBP17.79■□□□□ 0.44
CRAT-207ENST00000458362 NME2P1O60361 137 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 PPYP01298 95 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 BCL3P20749 454 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 NHLH2Q02577 135 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 SRYQ05066 204 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 FAM76BQ5HYJ3 339 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 C6orf15Q6UXA7 325 aaPredicted RBP17.78■□□□□ 0.44
CRAT-207ENST00000458362 MEX3BQ6ZN04 569 aaKnown RBP17.78■□□□□ 0.44
CRAT-207ENST00000458362 SLC35G3Q8N808 338 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 OR56B2PQ8NGI1 322 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 SECTM1Q8WVN6 248 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 HPSE2Q8WWQ2 592 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 TMEM45BQ96B21 275 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 SYT3Q9BQG1 590 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 NOSIPQ9Y314 301 aaKnown RBP17.78■□□□□ 0.44
CRAT-207ENST00000458362 LOXL2Q9Y4K0 774 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 A0A096LPE4 126 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 A0A1W2PPZ6 126 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 CELA3AP09093 270 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 CCL2P13500 99 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 FHITP49789 147 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 FOXG1P55316 489 aaPredicted RBP17.78■□□□□ 0.44
CRAT-207ENST00000458362 ETV3LQ6ZN32 361 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 EXTL1Q92935 676 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 SLAMF9Q96A28 289 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 AKR1E2Q96JD6 320 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 TECTBQ96PL2 329 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 GINS3Q9BRX5 216 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 SH3BGRL3Q9H299 93 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 FAM212BQ9NTI7 297 aaPredicted RBP17.78■□□□□ 0.44
CRAT-207ENST00000458362 FREM2Q5SZK8 3169 aa17.78■□□□□ 0.44
CRAT-207ENST00000458362 PQLC2LA1A4F0 135 aa17.77■□□□□ 0.44
CRAT-207ENST00000458362 LAMTOR5O43504 91 aa17.77■□□□□ 0.44
CRAT-207ENST00000458362 HEXAP06865 529 aa17.77■□□□□ 0.44
CRAT-207ENST00000458362 SSPNQ14714 243 aa17.77■□□□□ 0.44
CRAT-207ENST00000458362 MIDNQ504T8 468 aa17.77■□□□□ 0.44
CRAT-207ENST00000458362 TMEM105Q8N8V8 129 aa17.77■□□□□ 0.44
CRAT-207ENST00000458362 OR4D5Q8NGN0 318 aa17.77■□□□□ 0.44
CRAT-207ENST00000458362 RXFP4Q8TDU9 374 aa17.77■□□□□ 0.44
CRAT-207ENST00000458362 PAPOLGQ9BWT3 736 aaKnown RBP17.77■□□□□ 0.44
CRAT-207ENST00000458362 SCRT1Q9BWW7 348 aa17.77■□□□□ 0.44
CRAT-207ENST00000458362 POMT1Q9Y6A1 747 aa17.77■□□□□ 0.44
CRAT-207ENST00000458362 MEX3AA1L020 520 aaKnown RBP17.77■□□□□ 0.43
CRAT-207ENST00000458362 ST8SIA3O43173 380 aa17.77■□□□□ 0.43
CRAT-207ENST00000458362 GLAP06280 429 aa17.77■□□□□ 0.43
CRAT-207ENST00000458362 DANCRP0C864 163 aa17.77■□□□□ 0.43
CRAT-207ENST00000458362 CCNOP22674 350 aa17.77■□□□□ 0.43
CRAT-207ENST00000458362 P2RY1P47900 373 aa17.77■□□□□ 0.43
CRAT-207ENST00000458362 IL13RA2Q14627 380 aa17.77■□□□□ 0.43
CRAT-207ENST00000458362 GPR157Q5UAW9 335 aa17.77■□□□□ 0.43
CRAT-207ENST00000458362 CCDC71LQ8N9Z2 235 aa17.77■□□□□ 0.43
CRAT-207ENST00000458362 FBXO9Q9UK97 447 aaPredicted RBP17.77■□□□□ 0.43
CRAT-207ENST00000458362 BORCS7-ASMTA0A0B4J1R7 106 aa17.76■□□□□ 0.43
CRAT-207ENST00000458362 ZNF503-AS2A6NEH8 195 aa17.76■□□□□ 0.43
CRAT-207ENST00000458362 RPL36A-HNRNPH2H7BZ11 118 aa17.76■□□□□ 0.43
CRAT-207ENST00000458362 MPPED1O15442 326 aa17.76■□□□□ 0.43
CRAT-207ENST00000458362 MRPL33O75394 65 aaKnown RBP17.76■□□□□ 0.43
CRAT-207ENST00000458362 C1QL1O75973 258 aa17.76■□□□□ 0.43
CRAT-207ENST00000458362 SEC11BP0C7V7 166 aa17.76■□□□□ 0.43
CRAT-207ENST00000458362 SPP1P10451 314 aa17.76■□□□□ 0.43
CRAT-207ENST00000458362 PMELP40967 661 aa17.76■□□□□ 0.43
CRAT-207ENST00000458362 PRDX4Q13162 271 aa17.76■□□□□ 0.43
CRAT-207ENST00000458362 Q8NFD4 153 aa17.76■□□□□ 0.43
CRAT-207ENST00000458362 USB1Q9BQ65 265 aaKnown RBP17.76■□□□□ 0.43
CRAT-207ENST00000458362 IL36RNQ9UBH0 155 aa17.76■□□□□ 0.43
CRAT-207ENST00000458362 CACFD1Q9UGQ2 172 aa17.76■□□□□ 0.43
CRAT-207ENST00000458362 C3orf85A0A1B0GTC6 90 aa17.75■□□□□ 0.43
CRAT-207ENST00000458362 NKX2-6A6NCS4 301 aa17.75■□□□□ 0.43
CRAT-207ENST00000458362 TSPAN15O95858 294 aa17.75■□□□□ 0.43
CRAT-207ENST00000458362 HLA-HP01893 362 aa17.75■□□□□ 0.43
CRAT-207ENST00000458362 CRYBA1P05813 215 aa17.75■□□□□ 0.43
CRAT-207ENST00000458362 GNRHRP30968 328 aa17.75■□□□□ 0.43
CRAT-207ENST00000458362 ASCL1P50553 236 aa17.75■□□□□ 0.43
CRAT-207ENST00000458362 LPAL2Q16609 132 aa17.75■□□□□ 0.43
CRAT-207ENST00000458362 THOC3Q96J01 351 aaKnown RBP17.75■□□□□ 0.43
CRAT-207ENST00000458362 REPIN1Q9BWE0 567 aaKnown RBP17.75■□□□□ 0.43
CRAT-207ENST00000458362 HES7Q9BYE0 225 aa17.75■□□□□ 0.43
CRAT-207ENST00000458362 LRFN1Q9P244 771 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms