RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 NR1H4Q96RI1 486 aaPredicted RBP8.31□□□□□ -1.08
ATG4A-206ENST00000457035 GFI1Q99684 422 aa8.31□□□□□ -1.08
ATG4A-206ENST00000457035 NUDT16L1Q9BRJ7 211 aaKnown RBP8.31□□□□□ -1.08
ATG4A-206ENST00000457035 UQCC2Q9BRT2 126 aa8.31□□□□□ -1.08
ATG4A-206ENST00000457035 DCTN5Q9BTE1 182 aa8.31□□□□□ -1.08
ATG4A-206ENST00000457035 SHARPINQ9H0F6 387 aa8.31□□□□□ -1.08
ATG4A-206ENST00000457035 C7orf69Q9H7B7 122 aa8.31□□□□□ -1.08
ATG4A-206ENST00000457035 IL36GQ9NZH8 169 aa8.31□□□□□ -1.08
ATG4A-206ENST00000457035 OR5V1Q9UGF6 321 aa8.31□□□□□ -1.08
ATG4A-206ENST00000457035 RPUSD1Q9UJJ7 312 aaKnown RBP8.31□□□□□ -1.08
ATG4A-206ENST00000457035 GSTK1Q9Y2Q3 226 aa8.31□□□□□ -1.08
ATG4A-206ENST00000457035 SHISA3A0PJX4 238 aa8.3□□□□□ -1.08
ATG4A-206ENST00000457035 TMEM82A0PJX8 343 aa8.3□□□□□ -1.08
ATG4A-206ENST00000457035 ARL6IP5O75915 188 aa8.3□□□□□ -1.08
ATG4A-206ENST00000457035 HAND1O96004 215 aa8.3□□□□□ -1.08
ATG4A-206ENST00000457035 TK1P04183 234 aa8.3□□□□□ -1.08
ATG4A-206ENST00000457035 LIPFP07098 398 aa8.3□□□□□ -1.08
ATG4A-206ENST00000457035 JUNBP17275 347 aaPredicted RBP8.3□□□□□ -1.08
ATG4A-206ENST00000457035 NDUFB7P17568 137 aa8.3□□□□□ -1.08
ATG4A-206ENST00000457035 CALRP27797 417 aaKnown RBP8.3□□□□□ -1.08
ATG4A-206ENST00000457035 FGF9P31371 208 aaPredicted RBP8.3□□□□□ -1.08
ATG4A-206ENST00000457035 BMXP51813 675 aa8.3□□□□□ -1.08
ATG4A-206ENST00000457035 RSU1Q15404 277 aa8.3□□□□□ -1.08
ATG4A-206ENST00000457035 GLIPR1L1Q6UWM5 242 aa8.3□□□□□ -1.08
ATG4A-206ENST00000457035 C17orf107Q6ZR85 190 aa8.3□□□□□ -1.08
ATG4A-206ENST00000457035 NKAIN3Q8N8D7 197 aa8.3□□□□□ -1.08
ATG4A-206ENST00000457035 PNLDC1Q8NA58 520 aaKnown RBP8.3□□□□□ -1.08
ATG4A-206ENST00000457035 TMEM185AQ8NFB2 350 aa8.3□□□□□ -1.08
ATG4A-206ENST00000457035 OR10K1Q8NGX5 313 aa8.3□□□□□ -1.08
ATG4A-206ENST00000457035 FOXRED1Q96CU9 486 aaPredicted RBP8.3□□□□□ -1.08
ATG4A-206ENST00000457035 SNX22Q96L94 193 aa8.3□□□□□ -1.08
ATG4A-206ENST00000457035 DMRTB1Q96MA1 342 aa8.3□□□□□ -1.08
ATG4A-206ENST00000457035 FAM234AQ9H0X4 552 aa8.3□□□□□ -1.08
ATG4A-206ENST00000457035 METTL9Q9H1A3 318 aa8.3□□□□□ -1.08
ATG4A-206ENST00000457035 CDC42EP3Q9UKI2 254 aa8.3□□□□□ -1.08
ATG4A-206ENST00000457035 DNHD1Q96M86 4753 aa8.3□□□□□ -1.08
ATG4A-206ENST00000457035 TRAV1-2A0A0B4J238 106 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 A0A0G2JK05 382 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 A0A1W2PP11 408 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 SH2D1BO14796 132 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 ENSAO43768 121 aaKnown RBP8.29□□□□□ -1.08
ATG4A-206ENST00000457035 PSPNO60542 156 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 ZNF780AO75290 641 aaPredicted RBP8.29□□□□□ -1.08
ATG4A-206ENST00000457035 HTR3BO95264 441 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 OR2H2O95918 312 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 PPIAL4GP0DN37 164 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 SNU13P55769 128 aaKnown RBP8.29□□□□□ -1.08
ATG4A-206ENST00000457035 PDCD1Q15116 288 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 CHRFAM7AQ494W8 412 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 SLC22A6Q4U2R8 563 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 NHLRC3Q5JS37 347 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 GLT8D1Q68CQ7 371 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 FIP1L1Q6UN15 594 aaKnown RBP8.29□□□□□ -1.08
ATG4A-206ENST00000457035 BTNL3Q6UXE8 466 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 IL17RELQ6ZVW7 336 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 OR5D13Q8NGL4 314 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 TBC1D15Q8TC07 691 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 SLC25A28Q96A46 364 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 S100A13Q99584 98 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 BEX2Q9BXY8 128 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 FAM192AQ9GZU8 254 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 SLITRK2Q9H156 845 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 OR51E2Q9H255 320 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 ELL3Q9HB65 397 aaPredicted RBP8.29□□□□□ -1.08
ATG4A-206ENST00000457035 TXNL4BQ9NX01 149 aaKnown RBP8.29□□□□□ -1.08
ATG4A-206ENST00000457035 LPAR3Q9UBY5 353 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 GLS2Q9UI32 602 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 STUB1Q9UNE7 303 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 MRPS28Q9Y2Q9 187 aaKnown RBP8.29□□□□□ -1.08
ATG4A-206ENST00000457035 AK6Q9Y3D8 172 aaKnown RBP8.29□□□□□ -1.08
ATG4A-206ENST00000457035 AUP1Q9Y679 476 aa8.29□□□□□ -1.08
ATG4A-206ENST00000457035 SLC33A1O00400 549 aaPredicted RBP8.28□□□□□ -1.08
ATG4A-206ENST00000457035 DEGS1O15121 323 aa8.28□□□□□ -1.08
ATG4A-206ENST00000457035 SLC22A1O15245 554 aa8.28□□□□□ -1.08
ATG4A-206ENST00000457035 CSTBP04080 98 aaKnown RBP8.28□□□□□ -1.08
ATG4A-206ENST00000457035 SMIM18P0DKX4 95 aa8.28□□□□□ -1.08
ATG4A-206ENST00000457035 MMP9P14780 707 aa8.28□□□□□ -1.08
ATG4A-206ENST00000457035 CD36P16671 472 aa8.28□□□□□ -1.08
ATG4A-206ENST00000457035 SERPINA2P20848 420 aa8.28□□□□□ -1.08
ATG4A-206ENST00000457035 CAPZA1P52907 286 aa8.28□□□□□ -1.08
ATG4A-206ENST00000457035 ARF6P62330 175 aa8.28□□□□□ -1.08
ATG4A-206ENST00000457035 SCN1BQ07699 218 aa8.28□□□□□ -1.08
ATG4A-206ENST00000457035 GPR176Q14439 515 aa8.28□□□□□ -1.08
ATG4A-206ENST00000457035 IL13RA2Q14627 380 aa8.28□□□□□ -1.08
ATG4A-206ENST00000457035 PIGYQ3MUY2 71 aa8.28□□□□□ -1.08
ATG4A-206ENST00000457035 TMEM200BQ69YZ2 307 aa8.28□□□□□ -1.08
ATG4A-206ENST00000457035 C22orf42Q6IC83 251 aa8.28□□□□□ -1.08
ATG4A-206ENST00000457035 OR8H2Q8N162 312 aa8.28□□□□□ -1.08
ATG4A-206ENST00000457035 OSR2Q8N2R0 312 aa8.28□□□□□ -1.08
ATG4A-206ENST00000457035 ASCC1Q8N9N2 400 aaKnown RBP8.28□□□□□ -1.08
ATG4A-206ENST00000457035 TMEM104Q8NE00 496 aa8.28□□□□□ -1.08
ATG4A-206ENST00000457035 OR4S1Q8NGB4 309 aa8.28□□□□□ -1.08
ATG4A-206ENST00000457035 SPATA3Q8NHX4 192 aa8.28□□□□□ -1.08
ATG4A-206ENST00000457035 H1FXQ92522 213 aaKnown RBP8.28□□□□□ -1.08
ATG4A-206ENST00000457035 YIPF6Q96EC8 236 aa8.28□□□□□ -1.08
ATG4A-206ENST00000457035 MRPS24Q96EL2 167 aaKnown RBP8.28□□□□□ -1.08
ATG4A-206ENST00000457035 EXOSC4Q9NPD3 245 aaKnown RBP8.28□□□□□ -1.08
ATG4A-206ENST00000457035 PCDHB16Q9NRJ7 776 aa8.28□□□□□ -1.08
ATG4A-206ENST00000457035 C19orf12Q9NSK7 152 aa8.28□□□□□ -1.08
ATG4A-206ENST00000457035 ZNF581Q9P0T4 197 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms