RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 TMEM225BP0DP42 221 aa11.62□□□□□ -0.55
HDAC4-205ENST00000454542 CPEP16870 476 aa11.62□□□□□ -0.55
HDAC4-205ENST00000454542 TGFBR2P37173 567 aa11.62□□□□□ -0.55
HDAC4-205ENST00000454542 PTGFRP43088 359 aa11.62□□□□□ -0.55
HDAC4-205ENST00000454542 MAP2K4P45985 399 aa11.62□□□□□ -0.55
HDAC4-205ENST00000454542 RPL31P62899 125 aaKnown RBP11.62□□□□□ -0.55
HDAC4-205ENST00000454542 SRSF2Q01130 221 aaKnown RBP11.62□□□□□ -0.55
HDAC4-205ENST00000454542 INSL4Q14641 139 aa11.62□□□□□ -0.55
HDAC4-205ENST00000454542 LIPKQ5VXJ0 399 aa11.62□□□□□ -0.55
HDAC4-205ENST00000454542 RUSC1-AS1Q66K80 236 aa11.62□□□□□ -0.55
HDAC4-205ENST00000454542 HCP5Q6MZN7 132 aa11.62□□□□□ -0.55
HDAC4-205ENST00000454542 FAM185AQ8N0U4 392 aa11.62□□□□□ -0.55
HDAC4-205ENST00000454542 C11orf42Q8N5U0 333 aa11.62□□□□□ -0.55
HDAC4-205ENST00000454542 ZDHHC22Q8N966 263 aa11.62□□□□□ -0.55
HDAC4-205ENST00000454542 TBC1D15Q8TC07 691 aa11.62□□□□□ -0.55
HDAC4-205ENST00000454542 C22orf15Q8WYQ4 148 aa11.62□□□□□ -0.55
HDAC4-205ENST00000454542 C1orf147Q96MC9 270 aaPredicted RBP11.62□□□□□ -0.55
HDAC4-205ENST00000454542 GPER1Q99527 375 aa11.62□□□□□ -0.55
HDAC4-205ENST00000454542 OCEL1Q9H607 264 aa11.62□□□□□ -0.55
HDAC4-205ENST00000454542 METTL8Q9H825 291 aaKnown RBP11.62□□□□□ -0.55
HDAC4-205ENST00000454542 ACOT13Q9NPJ3 140 aa11.62□□□□□ -0.55
HDAC4-205ENST00000454542 SIRT7Q9NRC8 400 aa11.62□□□□□ -0.55
HDAC4-205ENST00000454542 GSTK1Q9Y2Q3 226 aa11.62□□□□□ -0.55
HDAC4-205ENST00000454542 A0A1W2PPK0 400 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 RNASEK-C17orf49H0YIS7 233 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 RBP4P02753 201 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 UCHL1P09936 223 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 CALCBP10092 127 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 CD37P11049 281 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 PRTN3P24158 256 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 DUSP1P28562 367 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 ERP29P30040 261 aaKnown RBP11.61□□□□□ -0.55
HDAC4-205ENST00000454542 SNU13P55769 128 aaKnown RBP11.61□□□□□ -0.55
HDAC4-205ENST00000454542 ACSM3Q53FZ2 586 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 FAM27D1Q5T7N8 215 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 TMEM200BQ69YZ2 307 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 BRD3OSQ6XYD6 125 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 LRRTM1Q86UE6 522 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 PHC2Q8IXK0 858 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 SIGLECL1Q8N7X8 197 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 CHST4Q8NCG5 386 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 OR4S1Q8NGB4 309 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 OR5D13Q8NGL4 314 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 TMEM158Q8WZ71 300 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 PHYHIPQ92561 330 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 LHX4Q969G2 390 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 JMJD8Q96S16 334 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 MGLLQ99685 303 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 TMED9Q9BVK6 235 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 YTHDF1Q9BYJ9 559 aaKnown RBP11.61□□□□□ -0.55
HDAC4-205ENST00000454542 CCDC90BQ9GZT6 254 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 FAM192AQ9GZU8 254 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 MS4A7Q9GZW8 240 aaPredicted RBP11.61□□□□□ -0.55
HDAC4-205ENST00000454542 IFT22Q9H7X7 185 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 GLS2Q9UI32 602 aa11.61□□□□□ -0.55
HDAC4-205ENST00000454542 SOX21Q9Y651 276 aaPredicted RBP11.61□□□□□ -0.55
HDAC4-205ENST00000454542 C17orf98A8MV24 154 aa11.6□□□□□ -0.55
HDAC4-205ENST00000454542 SIRPB1O00241 398 aa11.6□□□□□ -0.55
HDAC4-205ENST00000454542 SLC33A1O00400 549 aaPredicted RBP11.6□□□□□ -0.55
HDAC4-205ENST00000454542 SH2D1BO14796 132 aa11.6□□□□□ -0.55
HDAC4-205ENST00000454542 MGST3O14880 152 aa11.6□□□□□ -0.55
HDAC4-205ENST00000454542 CCL3L1P16619 93 aa11.6□□□□□ -0.55
HDAC4-205ENST00000454542 PSMA1P25786 263 aaKnown RBP11.6□□□□□ -0.55
HDAC4-205ENST00000454542 RPS25P62851 125 aaKnown RBP11.6□□□□□ -0.55
HDAC4-205ENST00000454542 PAX5Q02548 391 aa11.6□□□□□ -0.55
HDAC4-205ENST00000454542 GUCA2AQ02747 115 aa11.6□□□□□ -0.55
HDAC4-205ENST00000454542 MEF2CQ06413 473 aaPredicted RBP11.6□□□□□ -0.55
HDAC4-205ENST00000454542 KLRD1Q13241 179 aa11.6□□□□□ -0.55
HDAC4-205ENST00000454542 TRAM1Q15629 374 aa11.6□□□□□ -0.55
HDAC4-205ENST00000454542 GRK1Q15835 563 aa11.6□□□□□ -0.55
HDAC4-205ENST00000454542 SSX1Q16384 188 aa11.6□□□□□ -0.55
HDAC4-205ENST00000454542 UBE2UQ5VVX9 321 aa11.6□□□□□ -0.55
HDAC4-205ENST00000454542 NCR3LG1Q68D85 454 aa11.6□□□□□ -0.55
HDAC4-205ENST00000454542 TMEM91Q6ZNR0 172 aa11.6□□□□□ -0.55
HDAC4-205ENST00000454542 SATL1Q86VE3 508 aa11.6□□□□□ -0.55
HDAC4-205ENST00000454542 PIP4P2Q8N4L2 257 aa11.6□□□□□ -0.55
HDAC4-205ENST00000454542 OR4M1Q8NGD0 313 aa11.6□□□□□ -0.55
HDAC4-205ENST00000454542 PPP1R35Q8TAP8 253 aa11.6□□□□□ -0.55
HDAC4-205ENST00000454542 UQCC2Q9BRT2 126 aa11.6□□□□□ -0.55
HDAC4-205ENST00000454542 CHST6Q9GZX3 395 aa11.6□□□□□ -0.55
HDAC4-205ENST00000454542 PPIL3Q9H2H8 161 aaKnown RBP11.6□□□□□ -0.55
HDAC4-205ENST00000454542 ZMAT3Q9HA38 289 aaKnown RBP11.6□□□□□ -0.55
HDAC4-205ENST00000454542 LINC00312Q9Y6C7 94 aa11.6□□□□□ -0.55
HDAC4-205ENST00000454542 COL6A5A8TX70 2615 aa11.59□□□□□ -0.55
HDAC4-205ENST00000454542 TRAV24A0A0B4J272 114 aa11.59□□□□□ -0.55
HDAC4-205ENST00000454542 MDFIC2A0A1B0GVS7 189 aa11.59□□□□□ -0.55
HDAC4-205ENST00000454542 A0A1W2PPH5 198 aa11.59□□□□□ -0.55
HDAC4-205ENST00000454542 DNAJC9-AS1A6NH13 148 aa11.59□□□□□ -0.55
HDAC4-205ENST00000454542 CLDN34H7C241 214 aa11.59□□□□□ -0.55
HDAC4-205ENST00000454542 ZNF780AO75290 641 aaPredicted RBP11.59□□□□□ -0.55
HDAC4-205ENST00000454542 CDRT1O95170 752 aa11.59□□□□□ -0.55
HDAC4-205ENST00000454542 GABRR1P24046 479 aa11.59□□□□□ -0.55
HDAC4-205ENST00000454542 EEF1B2P24534 225 aaKnown RBP11.59□□□□□ -0.55
HDAC4-205ENST00000454542 GABRA5P31644 462 aa11.59□□□□□ -0.55
HDAC4-205ENST00000454542 DLX1P56177 255 aa11.59□□□□□ -0.55
HDAC4-205ENST00000454542 P2RX3P56373 397 aa11.59□□□□□ -0.55
HDAC4-205ENST00000454542 RBM11P57052 281 aaKnown RBP11.59□□□□□ -0.55
HDAC4-205ENST00000454542 UBA52P62987 128 aaKnown RBP11.59□□□□□ -0.55
HDAC4-205ENST00000454542 EMX1Q04741 257 aaPredicted RBP11.59□□□□□ -0.55
HDAC4-205ENST00000454542 BLMHQ13867 455 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms