RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 NLRC3Q7RTR2 1065 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 ZNF561Q8N587 486 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 CD177Q8N6Q3 437 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 DYNC2LI1Q8TCX1 351 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 ACOT12Q8WYK0 555 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 RAB39BQ96DA2 213 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 NEIL1Q96FI4 390 aaPredicted RBP9.65□□□□□ -0.86
SCN9A-204ENST00000452182 GAFA1Q96PS6 74 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 TMEM59Q9BXS4 323 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 OR5V1Q9UGF6 321 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 ITGB1BP2Q9UKP3 347 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 RAB22AQ9UL26 194 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 PCDHB10Q9UN67 800 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 ETV7Q9Y603 341 aa9.65□□□□□ -0.86
SCN9A-204ENST00000452182 TMEM272A0A1B0GTI8 110 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 A6NHS1 94 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 CYSRT1A8MQ03 144 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 ADAM20O43506 726 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 MPIG6BO95866 241 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 HEXAP06865 529 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 RPS2P15880 293 aaKnown RBP9.64□□□□□ -0.87
SCN9A-204ENST00000452182 ZNF182P17025 639 aaPredicted RBP9.64□□□□□ -0.87
SCN9A-204ENST00000452182 SOX6P35712 828 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 NPY4RP50391 375 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 IL13RA1P78552 427 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 C11orf91Q3C1V1 193 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 OR10K2Q6IF99 312 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 Q6P435 159 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 LYPD2Q6UXB3 125 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 ZNF841Q6ZN19 808 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 FAM89BQ8N5H3 189 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 AP3S1Q92572 193 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 FAM46BQ96A09 425 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 C1orf159Q96HA4 380 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 CCL13Q99616 98 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 URM1Q9BTM9 101 aaKnown RBP9.64□□□□□ -0.87
SCN9A-204ENST00000452182 SELENOIQ9C0D9 397 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 FAM234AQ9H0X4 552 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 BANF2Q9H503 90 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 SPACA1Q9HBV2 294 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 CCDC59Q9P031 241 aaKnown RBP9.64□□□□□ -0.87
SCN9A-204ENST00000452182 CTSZQ9UBR2 303 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 OR14J1Q9UGF5 321 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 SPATA2Q9UM82 520 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 MAB21L2Q9Y586 359 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 A0A0B4J203 849 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 GEMIN2O14893 280 aaKnown RBP9.64□□□□□ -0.87
SCN9A-204ENST00000452182 ZNF737O75373 536 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 OR2H2O95918 312 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 SNRPBP14678 240 aaKnown RBP9.64□□□□□ -0.87
SCN9A-204ENST00000452182 DUSP1P28562 367 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 GABRA2P47869 451 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 COL10A1Q03692 680 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 TAF9Q16594 264 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 FOXB2Q5VYV0 432 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 LINC00528Q8N1L1 170 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 FAM216BQ8N7L0 139 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 OR8B3Q8NGG8 313 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 LGALS14Q8TCE9 139 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 OR8B2Q96RD0 313 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 LPAR5Q9H1C0 372 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 KCNK15Q9H427 330 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 NARFLQ9H6Q4 476 aa9.64□□□□□ -0.87
SCN9A-204ENST00000452182 RCC2Q9P258 522 aaKnown RBP9.64□□□□□ -0.87
SCN9A-204ENST00000452182 ZNF469Q96JG9 3925 aaPredicted RBP9.63□□□□□ -0.87
SCN9A-204ENST00000452182 YLPM1P49750 1951 aaKnown RBP9.63□□□□□ -0.87
SCN9A-204ENST00000452182 CR1P17927 2039 aa9.63□□□□□ -0.87
SCN9A-204ENST00000452182 MYO9AB2RTY4 2548 aa9.63□□□□□ -0.87
SCN9A-204ENST00000452182 A8MXK9 166 aa9.63□□□□□ -0.87
SCN9A-204ENST00000452182 K7N7A8 449 aa9.63□□□□□ -0.87
SCN9A-204ENST00000452182 DEGS1O15121 323 aa9.63□□□□□ -0.87
SCN9A-204ENST00000452182 OR7C1O76099 320 aaPredicted RBP9.63□□□□□ -0.87
SCN9A-204ENST00000452182 PAHP00439 452 aa9.63□□□□□ -0.87
SCN9A-204ENST00000452182 PITPNBP48739 271 aa9.63□□□□□ -0.87
SCN9A-204ENST00000452182 CEBPDP49716 269 aaPredicted RBP9.63□□□□□ -0.87
SCN9A-204ENST00000452182 SNU13P55769 128 aaKnown RBP9.63□□□□□ -0.87
SCN9A-204ENST00000452182 IKZF1Q13422 519 aa9.63□□□□□ -0.87
SCN9A-204ENST00000452182 LRRC10Q5BKY1 277 aa9.63□□□□□ -0.87
SCN9A-204ENST00000452182 ZNRF1Q8ND25 227 aa9.63□□□□□ -0.87
SCN9A-204ENST00000452182 PPP1R35Q8TAP8 253 aa9.63□□□□□ -0.87
SCN9A-204ENST00000452182 SNX22Q96L94 193 aa9.63□□□□□ -0.87
SCN9A-204ENST00000452182 CMTM3Q96MX0 182 aa9.63□□□□□ -0.87
SCN9A-204ENST00000452182 SHARPINQ9H0F6 387 aa9.63□□□□□ -0.87
SCN9A-204ENST00000452182 TEX15Q9BXT5 2789 aa9.63□□□□□ -0.87
SCN9A-204ENST00000452182 ITPR3Q14573 2671 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 TRAV24A0A0B4J272 114 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 A0A1B0GW55 424 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 TMEM82A0PJX8 343 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 METTL21EPA6NDL7 271 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 FOXI3A8MTJ6 420 aaPredicted RBP9.62□□□□□ -0.87
SCN9A-204ENST00000452182 SLC33A1O00400 549 aaPredicted RBP9.62□□□□□ -0.87
SCN9A-204ENST00000452182 DVL1O14640 695 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 NDUFB3O43676 98 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 PSPNO60542 156 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 SCGNO76038 276 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 TFF1P04155 84 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 TK1P04183 234 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 CSN2P05814 226 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 GLAP06280 429 aa9.62□□□□□ -0.87
SCN9A-204ENST00000452182 DUX4L2P0CJ85 424 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms