RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 TXNL4BQ9NX01 149 aaKnown RBP7.37□□□□□ -1.23
COL8A1-203ENST00000452013 TAS2R4Q9NYW5 299 aa7.37□□□□□ -1.23
COL8A1-203ENST00000452013 SLC25A10Q9UBX3 287 aaPredicted RBP7.37□□□□□ -1.23
COL8A1-203ENST00000452013 OR14J1Q9UGF5 321 aa7.37□□□□□ -1.23
COL8A1-203ENST00000452013 OPN4Q9UHM6 478 aa7.37□□□□□ -1.23
COL8A1-203ENST00000452013 ZNF222Q9UK12 451 aa7.37□□□□□ -1.23
COL8A1-203ENST00000452013 FOXJ3Q9UPW0 622 aa7.37□□□□□ -1.23
COL8A1-203ENST00000452013 IGKV1D-17A0A075B6S4 117 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 A0A1W2PPH5 198 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 MEGF11A6BM72 1044 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 SH2D1BO14796 132 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 SPRY1O43609 319 aaPredicted RBP7.36□□□□□ -1.23
COL8A1-203ENST00000452013 KDM4BO94953 1096 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 AVPP01185 164 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 HLA-DQB1P01920 261 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 NDUFB7P17568 137 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 S100A1P23297 94 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 RPS19P39019 145 aaKnown RBP7.36□□□□□ -1.23
COL8A1-203ENST00000452013 RPS11P62280 158 aaKnown RBP eCLIP7.36□□□□□ -1.23
COL8A1-203ENST00000452013 ACSM3Q53FZ2 586 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 UNQ9370/PRO34162Q6UXP9 181 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 CDH26Q8IXH8 852 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 CMTM4Q8IZR5 234 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 CD177Q8N6Q3 437 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 ZNRF1Q8ND25 227 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 LY6G5BQ8NDX9 201 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 TMEM185AQ8NFB2 350 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 PXT1Q8NFP0 134 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 OR5D13Q8NGL4 314 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 PPP1R35Q8TAP8 253 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 H1FXQ92522 213 aaKnown RBP7.36□□□□□ -1.23
COL8A1-203ENST00000452013 RFT1Q96AA3 541 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 SPACA5Q96QH8 159 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 S100A13Q99584 98 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 DCTN5Q9BTE1 182 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 SRRQ9GZT4 340 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 FAM234AQ9H0X4 552 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 RPUSD1Q9UJJ7 312 aaKnown RBP7.36□□□□□ -1.23
COL8A1-203ENST00000452013 MAB21L2Q9Y586 359 aa7.36□□□□□ -1.23
COL8A1-203ENST00000452013 F8P00451 2351 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 RTTNQ86VV8 2226 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 TRBV5-7A0A0A0MS05 114 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 TRBV23-1A0A0A0MS06 115 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 A0A1W2PPK0 400 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 FAM172BPA6NC97 362 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 C22orf46C9J442 243 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 RGS13O14921 159 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 RGS5O15539 181 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 ANGPTL7O43827 346 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 TOX4O94842 621 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 CDRT1O95170 752 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 PRKACAP17612 351 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 IGFBP3P17936 291 aaPredicted RBP7.35□□□□□ -1.23
COL8A1-203ENST00000452013 BCL3P20749 454 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 ZNF93P35789 620 aaPredicted RBP7.35□□□□□ -1.23
COL8A1-203ENST00000452013 PTGFRP43088 359 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 NPBWR2P48146 333 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 RAB25P57735 213 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 BPIFB3P59826 476 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 FGF12P61328 243 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 ARF6P62330 175 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 DOC2BQ14184 412 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 ZNF146Q15072 292 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 PDCD1Q15116 288 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 SPIN3Q5JUX0 258 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 METTL11BQ5VVY1 283 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 MZT2BQ6NZ67 158 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 C1orf229Q6ZS94 237 aaPredicted RBP7.35□□□□□ -1.23
COL8A1-203ENST00000452013 C1orf122Q6ZSJ8 110 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 GDPD3Q7L5L3 318 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 CEACAM19Q7Z692 300 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 TPRA1Q86W33 373 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 OR8H2Q8N162 312 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 BATF2Q8N1L9 274 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 OR52N4Q8NGI2 321 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 OR5D18Q8NGL1 313 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 OR13C5Q8NGS8 318 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 TNFAIP8L1Q8WVP5 186 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 PHYHIPQ92561 330 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 DACT3Q96B18 629 aaPredicted RBP7.35□□□□□ -1.23
COL8A1-203ENST00000452013 UPRTQ96BW1 309 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 SNX22Q96L94 193 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 DERL3Q96Q80 235 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 OR14A2Q96R54 314 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 TMED9Q9BVK6 235 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 SLITRK2Q9H156 845 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 METTL9Q9H1A3 318 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 ELL3Q9HB65 397 aaPredicted RBP7.35□□□□□ -1.23
COL8A1-203ENST00000452013 TCF7L1Q9HCS4 588 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 ZNF221Q9UK13 617 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 NUP50Q9UKX7 468 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 ING4Q9UNL4 249 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 SF3B6Q9Y3B4 125 aaKnown RBP7.35□□□□□ -1.23
COL8A1-203ENST00000452013 KPTNQ9Y664 436 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 V9GYH0 126 aa7.35□□□□□ -1.23
COL8A1-203ENST00000452013 MAP1AP78559 2803 aaPredicted RBP7.35□□□□□ -1.23
COL8A1-203ENST00000452013 CELSR1Q9NYQ6 3014 aa7.34□□□□□ -1.23
COL8A1-203ENST00000452013 A0A0A6YYJ9 748 aa7.34□□□□□ -1.23
COL8A1-203ENST00000452013 IGKV1-12A0A0C4DH73 117 aa7.34□□□□□ -1.23
COL8A1-203ENST00000452013 A0A1B0GW55 424 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms