RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 FAM58AQ8N1B3 248 aa10.87□□□□□ -0.67
VPS33A-202ENST00000451053 OR10K1Q8NGX5 313 aa10.87□□□□□ -0.67
VPS33A-202ENST00000451053 C15orf40Q8WUR7 153 aa10.87□□□□□ -0.67
VPS33A-202ENST00000451053 EMG1Q92979 244 aaKnown RBP10.87□□□□□ -0.67
VPS33A-202ENST00000451053 FAM46BQ96A09 425 aa10.87□□□□□ -0.67
VPS33A-202ENST00000451053 SLC25A38Q96DW6 304 aa10.87□□□□□ -0.67
VPS33A-202ENST00000451053 CCL13Q99616 98 aa10.87□□□□□ -0.67
VPS33A-202ENST00000451053 TMUB1Q9BVT8 246 aa10.87□□□□□ -0.67
VPS33A-202ENST00000451053 ATG5Q9H1Y0 275 aa10.87□□□□□ -0.67
VPS33A-202ENST00000451053 PATZ1Q9HBE1 687 aaKnown RBP10.87□□□□□ -0.67
VPS33A-202ENST00000451053 DIABLOQ9NR28 239 aa10.87□□□□□ -0.67
VPS33A-202ENST00000451053 EXTL2Q9UBQ6 330 aa10.87□□□□□ -0.67
VPS33A-202ENST00000451053 CTSZQ9UBR2 303 aa10.87□□□□□ -0.67
VPS33A-202ENST00000451053 DUX4Q9UBX2 424 aa10.87□□□□□ -0.67
VPS33A-202ENST00000451053 PCDHB10Q9UN67 800 aa10.87□□□□□ -0.67
VPS33A-202ENST00000451053 FABP12A6NFH5 140 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 FAM157AC9JC47 383 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 ADAM20O43506 726 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 MPIG6BO95866 241 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 CHRM2P08172 466 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 WNT2P09544 360 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 CD99P14209 185 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 RPS2P15880 293 aaKnown RBP10.86□□□□□ -0.67
VPS33A-202ENST00000451053 MGMTP16455 207 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 PRKACAP17612 351 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 CPT2P23786 658 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 SNU13P55769 128 aaKnown RBP10.86□□□□□ -0.67
VPS33A-202ENST00000451053 RPS27AP62979 156 aaKnown RBP10.86□□□□□ -0.67
VPS33A-202ENST00000451053 UNC119Q13432 240 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 KCNJ8Q15842 424 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 TMEM249Q2WGJ8 235 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 FIP1L1Q6UN15 594 aaKnown RBP10.86□□□□□ -0.67
VPS33A-202ENST00000451053 CMTM4Q8IZR5 234 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 OSR2Q8N2R0 312 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 CD177Q8N6Q3 437 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 FAM216BQ8N7L0 139 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 Q8NFD4 153 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 OR56B1Q8NGI3 324 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 ANGPTL6Q8NI99 470 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 C18orf12Q96KH6 178 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 GAFA1Q96PS6 74 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 NUDT16L1Q9BRJ7 211 aaKnown RBP10.86□□□□□ -0.67
VPS33A-202ENST00000451053 AKIP1Q9NQ31 210 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 MIOXQ9UGB7 285 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 ZNF222Q9UK12 451 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 OTOGQ6ZRI0 2925 aa10.86□□□□□ -0.67
VPS33A-202ENST00000451053 RFPL4AA6NLU0 287 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 RFPL4AL1F8VTS6 287 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 NDUFA2O43678 99 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 FCN3O75636 299 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 KNG1P01042 644 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 INHBBP09529 407 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 IGHV4-31P0DP07 118 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 SELLP14151 372 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 DUSP1P28562 367 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 GABRA2P47869 451 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 FGF12P61328 243 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 PITPNAQ00169 270 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 ARL6IP1Q15041 203 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 NHLRC3Q5JS37 347 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 TMEM69Q5SWH9 247 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 ATPAF1Q5TC12 328 aaPredicted RBP10.85□□□□□ -0.67
VPS33A-202ENST00000451053 OR10K2Q6IF99 312 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 FAM131AQ6UXB0 335 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 LINC00596Q86U02 117 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 TMEM104Q8NE00 496 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 OR4M1Q8NGD0 313 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 RAB39BQ96DA2 213 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 NEIL1Q96FI4 390 aaPredicted RBP10.85□□□□□ -0.67
VPS33A-202ENST00000451053 TM2D1Q9BX74 207 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 SELENOIQ9C0D9 397 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 KCNK15Q9H427 330 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 OR14J1Q9UGF5 321 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 METRNQ9UJH8 293 aa10.85□□□□□ -0.67
VPS33A-202ENST00000451053 TEX15Q9BXT5 2789 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 A0A1W2PP11 408 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 FAM90A10PA6NDY2 464 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 FAM90A18PA6NE21 464 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 FAM90A16PA6NEW6 464 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 FAM90A20PA6NIJ5 464 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 NKX6-3A6NJ46 265 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 FAM90A8PA6NJQ4 464 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 FAM90A7PA6NKC0 464 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 FAM90A22PA8MWA6 464 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 FAM90A12PA8MX19 464 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 FAM90A5PA8MXJ8 464 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 FAM90A23PA8MXZ1 464 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 TMPRSS2O15393 492 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 XRCC3O43542 346 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 HEXAP06865 529 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 FAM90A15PP0C7V4 464 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 FAM90A13PP0C7W8 464 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 FAM90A14PP0C7W9 464 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 FAM90A24PP0C7X0 464 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 PRDX2P32119 198 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 MNDAP41218 407 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 PITPNBP48739 271 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 EFNB2P52799 333 aa10.84□□□□□ -0.67
VPS33A-202ENST00000451053 RBM11P57052 281 aaKnown RBP10.84□□□□□ -0.67
VPS33A-202ENST00000451053 KRTAP1-1Q07627 177 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms